FFCP PHASE1:Hg19::chr16:75284758..75284802,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C611|description=CAGE_peak_at_chr16:75284758..75284802,-|id=chr16:75284758..75284802,-|ontology_enrichment_celltype=CL:1000449!5.76e-14!16;CL:1000497!6.52e-14!18;CL:0002518!6.52e-14!18;CL:0002681!1.05e-10!13;CL:0002584!1.05e-10!13;CL:1000507!5.86e-10!12;CL:1000494!5.86e-10!12;CL:0000066!1.20e-08!254|ontology_enrichment_celltype_v019=CL:1000497;1.23e-21;17!CL:0002518;1.23e-21;17!CL:1000449;1.28e-19;15!CL:1000507;3.09e-17;10!CL:1000494;3.09e-17;10!CL:0002681;7.19e-14;12!CL:0002584;7.19e-14;12!CL:1000746;4.52e-11;7!CL:1000612;4.52e-11;7!CL:0000650;1.72e-10;2!CL:1000500;1.72e-10;2!CL:1000618;1.72e-10;2!CL:1001318;1.72e-10;2!CL:0002173;1.72e-10;2!CL:0000239;1.87e-07;3!CL:1000615;1.87e-07;3!CL:0002306;1.87e-07;3!CL:0000182;4.69e-07;12|ontology_enrichment_celltype_v019_2=CL:1000497,1.44e-21,17;CL:0002518,1.44e-21,17;CL:1000449,1.39e-19,15;CL:1000507,3.10e-17,10;CL:1000494,3.10e-17,10;CL:0002681,7.92e-14,12;CL:0002584,7.92e-14,12;CL:1000746,3.65e-11,7;CL:1000612,3.65e-11,7;CL:0000650,1.00e-10,2;CL:1000500,1.00e-10,2;CL:1000618,1.00e-10,2;CL:1001318,1.00e-10,2;CL:0002173,1.00e-10,2;CL:0000239,2.76e-07,3;CL:1000615,2.76e-07,3;CL:0002306,2.76e-07,3;CL:0000182,4.14e-07,12|ontology_enrichment_development_v019=UBERON:0009497;1.28e-18;13!UBERON:0004161;1.93e-16;11!UBERON:0003104;3.55e-14;31!UBERON:0001041;2.06e-07;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000481!2.91e-16!347;UBERON:0006555!8.60e-15!17;UBERON:0005103!8.60e-15!17;UBERON:0000083!8.60e-15!17;UBERON:0009201!8.60e-15!17;UBERON:0004819!8.60e-15!17;UBERON:0006553!8.60e-15!17;UBERON:0003074!8.60e-15!17;UBERON:0003060!8.60e-15!17;UBERON:0004211!5.76e-14!16;UBERON:0001285!5.76e-14!16;UBERON:0007684!5.76e-14!16;UBERON:0003220!5.76e-14!16;UBERON:0004208!5.76e-14!16;UBERON:0003104!1.09e-13!238;UBERON:0009142!1.09e-13!238;UBERON:0000080!1.13e-13!18;UBERON:0002120!1.13e-13!18;UBERON:0004875!1.13e-13!18;UBERON:0005721!1.13e-13!18;UBERON:0005754!1.13e-13!18;UBERON:0007297!1.13e-13!18;UBERON:0004876!1.44e-13!20;UBERON:0003064!1.24e-12!37;UBERON:0005172!1.43e-12!55;UBERON:0005173!1.43e-12!55;UBERON:0000058!2.32e-12!26;UBERON:0003887!3.33e-12!21;UBERON:0009569!3.96e-12!113;UBERON:0006554!5.01e-12!44;UBERON:0002113!7.85e-12!27;UBERON:0003918!7.85e-12!27;UBERON:0005095!7.85e-12!27;UBERON:0007687!7.85e-12!27;UBERON:0005177!9.70e-12!107;UBERON:0001008!1.43e-11!45;UBERON:0002417!3.85e-11!61;UBERON:0000916!3.85e-11!61;UBERON:0002100!4.39e-11!216;UBERON:0003914!1.04e-10!118;UBERON:0001225!1.05e-10!13;UBERON:0008987!1.05e-10!13;UBERON:0000025!1.29e-10!194;UBERON:0000466!1.72e-10!126;UBERON:0004111!2.01e-10!241;UBERON:0004921!2.23e-10!129;UBERON:0004185!2.23e-10!129;UBERON:0005409!3.82e-10!35;UBERON:0009773!5.86e-10!12;UBERON:0001231!5.86e-10!12;UBERON:0004810!5.86e-10!12;UBERON:0005256!1.60e-09!143;UBERON:0001851!1.99e-09!16;UBERON:0000489!4.83e-09!32;UBERON:0000160!2.50e-08!27;UBERON:0000464!3.05e-08!104;UBERON:0000119!3.19e-08!312;UBERON:0000483!3.37e-08!309;UBERON:0001007!3.77e-08!155;UBERON:0001555!3.77e-08!155;UBERON:0007026!3.77e-08!155;UBERON:0004119!5.53e-08!169;UBERON:0000925!5.53e-08!169;UBERON:0006595!5.53e-08!169;UBERON:0003103!5.94e-08!69;UBERON:0000475!1.03e-07!365;UBERON:0000477!1.24e-07!286;UBERON:0003886!1.88e-07!63;UBERON:0000353!2.16e-07!17;UBERON:0000077!6.58e-07!130|ontology_enrichment_uberon_v019=UBERON:0002113;1.41e-22;24!UBERON:0011143;1.41e-22;24!UBERON:0006555;1.28e-19;15!UBERON:0004819;1.28e-19;15!UBERON:0001285;1.28e-19;15!UBERON:0007684;1.28e-19;15!UBERON:0000489;2.61e-18;29!UBERON:0006554;1.26e-17;30!UBERON:0001008;1.26e-17;30!UBERON:0004211;3.09e-17;10!UBERON:0009773;3.09e-17;10!UBERON:0001231;3.09e-17;10!UBERON:0004810;3.09e-17;10!UBERON:0000160;1.14e-16;17!UBERON:0005172;1.50e-16;52!UBERON:0005173;1.50e-16;52!UBERON:0005409;3.74e-16;22!UBERON:0001225;7.19e-14;12!UBERON:0008987;7.19e-14;12!UBERON:0000059;3.28e-11;11!UBERON:0000074;4.52e-11;7!UBERON:0001229;4.52e-11;7!UBERON:0001851;5.52e-11;15!UBERON:0000353;5.52e-11;15!UBERON:0003567;1.72e-10;2!UBERON:0003838;1.72e-10;2!UBERON:0003586;1.72e-10;2!UBERON:0005169;1.72e-10;2!UBERON:0002321;1.72e-10;2!UBERON:0005215;1.72e-10;2!UBERON:0002303;1.72e-10;2!UBERON:0002319;1.72e-10;2!UBERON:0004921;5.15e-10;33!UBERON:0002417;1.15e-09;58!UBERON:0000916;1.15e-09;58!UBERON:0002423;3.24e-09;25!UBERON:0001155;4.41e-09;9!UBERON:0006853;1.87e-07;3!UBERON:0007685;1.87e-07;3!UBERON:0004134;1.87e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005172,7.47e-23,54;UBERON:0005173,7.47e-23,54;UBERON:0002113,1.28e-20,26;UBERON:0003918,1.28e-20,26;UBERON:0011143,1.28e-20,26;UBERON:0005095,1.28e-20,26;UBERON:0007687,1.28e-20,26;UBERON:0002417,3.51e-20,60;UBERON:0000916,3.51e-20,60;UBERON:0004211,1.39e-19,15;UBERON:0009773,1.39e-19,15;UBE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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C611 | |||
|description=CAGE_peak_at_chr16:75284758..75284802,- | |||
|id=chr16:75284758..75284802,- | |||
|ontology_enrichment_celltype=CL:1000449!5.76e-14!16;CL:1000497!6.52e-14!18;CL:0002518!6.52e-14!18;CL:0002681!1.05e-10!13;CL:0002584!1.05e-10!13;CL:1000507!5.86e-10!12;CL:1000494!5.86e-10!12;CL:0000066!1.20e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.23e-21;17!CL:0002518;1.23e-21;17!CL:1000449;1.28e-19;15!CL:1000507;3.09e-17;10!CL:1000494;3.09e-17;10!CL:0002681;7.19e-14;12!CL:0002584;7.19e-14;12!CL:1000746;4.52e-11;7!CL:1000612;4.52e-11;7!CL:0000650;1.72e-10;2!CL:1000500;1.72e-10;2!CL:1000618;1.72e-10;2!CL:1001318;1.72e-10;2!CL:0002173;1.72e-10;2!CL:0000239;1.87e-07;3!CL:1000615;1.87e-07;3!CL:0002306;1.87e-07;3!CL:0000182;4.69e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.44e-21,17;CL:0002518,1.44e-21,17;CL:1000449,1.39e-19,15;CL:1000507,3.10e-17,10;CL:1000494,3.10e-17,10;CL:0002681,7.92e-14,12;CL:0002584,7.92e-14,12;CL:1000746,3.65e-11,7;CL:1000612,3.65e-11,7;CL:0000650,1.00e-10,2;CL:1000500,1.00e-10,2;CL:1000618,1.00e-10,2;CL:1001318,1.00e-10,2;CL:0002173,1.00e-10,2;CL:0000239,2.76e-07,3;CL:1000615,2.76e-07,3;CL:0002306,2.76e-07,3;CL:0000182,4.14e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.28e-18;13!UBERON:0004161;1.93e-16;11!UBERON:0003104;3.55e-14;31!UBERON:0001041;2.06e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002113;1.41e-22;24!UBERON:0011143;1.41e-22;24!UBERON:0006555;1.28e-19;15!UBERON:0004819;1.28e-19;15!UBERON:0001285;1.28e-19;15!UBERON:0007684;1.28e-19;15!UBERON:0000489;2.61e-18;29!UBERON:0006554;1.26e-17;30!UBERON:0001008;1.26e-17;30!UBERON:0004211;3.09e-17;10!UBERON:0009773;3.09e-17;10!UBERON:0001231;3.09e-17;10!UBERON:0004810;3.09e-17;10!UBERON:0000160;1.14e-16;17!UBERON:0005172;1.50e-16;52!UBERON:0005173;1.50e-16;52!UBERON:0005409;3.74e-16;22!UBERON:0001225;7.19e-14;12!UBERON:0008987;7.19e-14;12!UBERON:0000059;3.28e-11;11!UBERON:0000074;4.52e-11;7!UBERON:0001229;4.52e-11;7!UBERON:0001851;5.52e-11;15!UBERON:0000353;5.52e-11;15!UBERON:0003567;1.72e-10;2!UBERON:0003838;1.72e-10;2!UBERON:0003586;1.72e-10;2!UBERON:0005169;1.72e-10;2!UBERON:0002321;1.72e-10;2!UBERON:0005215;1.72e-10;2!UBERON:0002303;1.72e-10;2!UBERON:0002319;1.72e-10;2!UBERON:0004921;5.15e-10;33!UBERON:0002417;1.15e-09;58!UBERON:0000916;1.15e-09;58!UBERON:0002423;3.24e-09;25!UBERON:0001155;4.41e-09;9!UBERON:0006853;1.87e-07;3!UBERON:0007685;1.87e-07;3!UBERON:0004134;1.87e-07;3 | |||
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|short_description=p@chr16:75284758..75284802,- | |||
}} |
Revision as of 11:34, 11 September 2013
Short description: | p@chr16:75284758..75284802, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:75284758..75284802, - |
Coexpression cluster: | C611_small_hepatocellular_colon_adenocarcinoma_Intestinal_signet_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.44e-21 | 17 |
kidney epithelial cell | 1.44e-21 | 17 |
epithelial cell of nephron | 1.39e-19 | 15 |
kidney tubule cell | 3.10e-17 | 10 |
nephron tubule epithelial cell | 3.10e-17 | 10 |
kidney cortical cell | 7.92e-14 | 12 |
renal cortical epithelial cell | 7.92e-14 | 12 |
glomerular cell | 3.65e-11 | 7 |
kidney corpuscule cell | 3.65e-11 | 7 |
mesangial cell | 1.00e-10 | 2 |
kidney interstitial cell | 1.00e-10 | 2 |
juxtaglomerular complex cell | 1.00e-10 | 2 |
renal interstitial pericyte | 1.00e-10 | 2 |
extraglomerular mesangial cell | 1.00e-10 | 2 |
brush border epithelial cell | 2.76e-07 | 3 |
kidney cortex tubule cell | 2.76e-07 | 3 |
epithelial cell of proximal tubule | 2.76e-07 | 3 |
hepatocyte | 4.14e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.