UBERON:0004209
From FANTOM5_SSTAR
| Name: | renal vesicle |
|---|---|
| Namespace: | FANTOM |
| Definition: | "The renal vesicle is the primordial structure of the nephron epithelium, and is formed by the condensation of mesenchymal cells. " [GO:0072077] |
| Synonyms: | "stage I nephron" EXACT ZFA:0005586 |
| Comments: | Editor notes: note that this class includes both metanephric and mesonephric vesicles - ZFA and EHDAA2 associations are placed with these classes. TODO - make a more specific develops_from relationship - see UBERON:0005107 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0007497(developing epithelial placode),UBERON:0007503(epithelial vesicle) |
|---|---|
| develops_from: | UBERON:0004208(nephrogenic mesenchyme) |
| part_of: | UBERON:0010536(nephron progenitor) |
Children
| develops from: | UBERON:0004198 (comma-shaped body),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004209 (renal vesicle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
