UBERON:0011143
From FANTOM5_SSTAR
Name: | upper urinary tract | |
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Namespace: | FANTOM | |
Definition: | "Subdivision of urinary system which consists of the kidney and the ureters." [FMA:45658] | |
Xrefs: |
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Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000477(anatomical cluster),UBERON:0006554(urinary system structure),UBERON:0015212(lateral structure) |
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part_of: | UBERON:0001008(renal system) |
Children
part of: | UBERON:0000056 (ureter),UBERON:0002113 (kidney) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10017-101C8 (kidney, adult, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10088-102B7
- 10290-104G2
- 10318-105A3
- 10346-105D4
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10450-106F9 (embryonic kidney cell line: HEK293/SLAM untreated)
- 10451-106G1 (embryonic kidney cell line: HEK293/SLAM infection, 24hr)
- 10466-106H7
... further results Mouse (Mus musculus)
- 10017-101C8 (kidney, adult, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10088-102B7
- 10290-104G2
- 10318-105A3
- 10346-105D4
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10450-106F9 (embryonic kidney cell line: HEK293/SLAM untreated)
- 10451-106G1 (embryonic kidney cell line: HEK293/SLAM infection, 24hr)
- 10466-106H7
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011143 (upper urinary tract), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data