Personal tools

UBERON:0007297

From FANTOM5_SSTAR

Jump to: navigation, search

Name:presumptive pronephric mesoderm
Namespace:FANTOM
Xrefs:
links:

EFO:0003619
TAO:0001070

ZFA:0001070
Synonyms: "nephron primordium" EXACT [ZFA:0001070]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0006598(presumptive structure)



Children

develops from:UBERON:0005721 (pronephric mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007297 (presumptive pronephric mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7p4@Spink12
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7p4@Spink12
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7p4@Defb42
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402dp@chr2:152388713..152388729, +
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402dp@chr2:152388713..152388729, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7p@chr2:120409486..120409492, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7p@chr2:120409486..120409492, +
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419eddp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419eddp4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419eddp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419eddp2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419eddp4@Cyb561
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419eddp2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585048..63585062, -
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26732045..26732085, +
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517bp@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517bp2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517bp2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26732045..26732085, +
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26611246..26611253, -
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517bp@chr14:63627556..63627564, -
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67ep@chr2:69981027..69981032, +
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67ep@chr2:69981027..69981032, +
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562fp@chr1:172416185..172416189, -
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562fp@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562fp10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562fp@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562fp@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562fp10@PAX2
4.54e-44FFCP PHASE2:Mm9::chr7:31507623..31507631,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p4@Atp4a
4.54e-44FFCP PHASE2:Mm9::chr3:146278590..146278595,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p10@Dnase2b
4.54e-44FFCP PHASE2:Mm9::chr13:21381141..21381155,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21381141..21381155, -
4.54e-44FFCP PHASE2:Mm9::chr15:54678983..54678995,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:54678983..54678995, -
4.54e-44FFCP PHASE1:Mm9::chr5:124447371..124447383,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:124447371..124447383, +
4.54e-44FFCP PHASE1:Mm9::chr4:134913640..134913649,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr4:134913640..134913649, +
4.54e-44FFCP PHASE1:Mm9::chr14:51670340..51670346,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr14:51670340..51670346, -
4.54e-44FFCP PHASE1:Mm9::chr9:35651807..35651818,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@9230110F15Rik
4.54e-44FFCP PHASE2:Mm9::chr1:168436322..168436326,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:168436322..168436326, -
4.54e-44FFCP PHASE1:Mm9::chr6:54359310..54359337,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr6:54359310..54359337, -
4.54e-44FFCP PHASE1:Mm9::chr2:148676901..148676906,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p8@9230104L09Rik
4.54e-44FFCP PHASE1:Mm9::chr11:34107586..34107593,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:34107586..34107593, -
4.54e-44FFCP PHASE2:Mm9::chr2:75866210..75866235,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:75866210..75866235, +
4.54e-44FFCP PHASE1:Mm9::chrX:156776465..156776473,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:156776465..156776473, -
4.54e-44FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr7:151928014..151928021, +
4.54e-44FFCP PHASE2:Mm9::chr12:103896072..103896081,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr12:103896072..103896081, -
4.54e-44FFCP PHASE1:Mm9::chr1:11079838..11079844,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:11079838..11079844, +
4.54e-44FFCP PHASE2:Mm9::chr1:90155966..90155989,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:90155966..90155989, +
4.54e-44FFCP PHASE2:Mm9::chr18:46301295..46301302,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr18:46301295..46301302, -
4.54e-44FFCP PHASE2:Mm9::chr13:21379065..21379072,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379065..21379072, -
4.54e-44FFCP PHASE1:Mm9::chr9:56469136..56469145,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:56469136..56469145, -
4.54e-44FFCP PHASE2:Mm9::chr2:164439019..164439029,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p1@Wfdc6b
4.54e-44FFCP PHASE1:Mm9::chr12:16663110..16663116,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Ntsr2
4.54e-44FFCP PHASE2:Mm9::chr19:24582739..24582748,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr19:24582739..24582748, -
4.54e-44FFCP PHASE2:Mm9::chr11:53938008..53938022,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p11@P4ha2
4.54e-44FFCP PHASE2:Mm9::chr13:21379322..21379338,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379322..21379338, -
4.54e-44FFCP PHASE2:Mm9::chr6:147624258..147624285,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr6:147624258..147624285, -
4.54e-44FFCP PHASE1:Mm9::chr5:112721323..112721328,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:112721323..112721328, +
4.54e-44FFCP PHASE2:Mm9::chr17:14306714..14306740,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr17:14306714..14306740, +
4.54e-44FFCP PHASE1:Mm9::chr17:73221062..73221084,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr17:73221062..73221084, +
4.54e-44FFCP PHASE2:Mm9::chr8:126591032..126591039,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:126591032..126591039, +
4.54e-44FFCP PHASE2:Mm9::chr1:165219453..165219469,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p11@Prrx1
4.54e-44FFCP PHASE1:Mm9::chr2:25349414..25349424,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p5@Lcn12
4.54e-44FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr12:103896072..103896081, -
4.54e-44FFCP PHASE2:Mm9::chrX:50280152..50280179,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:50280152..50280179, +
4.54e-44FFCP PHASE2:Mm9::chr18:44261480..44261486,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr18:44261480..44261486, +
4.54e-44FFCP PHASE1:Mm9::chr5:31379550..31379559,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31379550..31379559, +
4.54e-44FFCP PHASE2:Mm9::chr7:109379335..109379338,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p21@Pgap2
4.54e-44FFCP PHASE1:Mm9::chr13:21379430..21379437,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379430..21379437, -
4.54e-44FFCP PHASE2:Mm9::chr8:19141447..19141469,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:19141447..19141469, +
4.54e-44FFCP PHASE2:Mm9::chr2:25677632..25677636,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:25677632..25677636, -
4.54e-44FFCP PHASE2:Mm9::chr5:31379878..31379883,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31379878..31379883, +
4.54e-44FFCP PHASE1:Mm9::chr18:46301295..46301302,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr18:46301295..46301302, -
4.54e-44FFCP PHASE1:Mm9::chr12:110131610..110131621,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p11@Wars
4.54e-44FFCP PHASE2:Mm9::chr2:148676901..148676906,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p8@9230104L09Rik
4.54e-44FFCP PHASE1:Mm9::chr5:110773718..110773729,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:110773718..110773729, +
4.54e-44FFCP PHASE2:Mm9::chr14:52542831..52542836,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p4@Rnase13
4.54e-44FFCP PHASE2:Mm9::chr1:87936213..87936218,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:87936213..87936218, +
4.54e-44FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr14:69143309..69143319, -
4.54e-44FFCP PHASE2:Mm9::chr2:152302739..152302742,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p5@Defb20
4.54e-44FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p2@ENSMUST00000152401
4.54e-44FFCP PHASE2:Mm9::chrX:20422498..20422506,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:20422498..20422506, +
4.54e-44FFCP PHASE1:Mm9::chr5:31377177..31377184,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31377177..31377184, +
4.54e-44FFCP PHASE2:Mm9::chr12:104945515..104945524,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr12:104945515..104945524, -
4.54e-44FFCP PHASE2:Mm9::chr8:19062951..19062955,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:19062951..19062955, +
4.54e-44FFCP PHASE2:Mm9::chr1:89596972..89596981,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:89596972..89596981, +
4.54e-44FFCP PHASE2:Mm9::chr11:101959159..101959163,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:101959159..101959163, +
4.54e-44FFCP PHASE2:Mm9::chr9:35651679..35651691,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p5@9230110F15Rik
4.54e-44FFCP PHASE1:Mm9::chr13:21381141..21381155,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21381141..21381155, -
4.54e-44FFCP PHASE1:Mm9::chrX:164787162..164787188,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:164787162..164787188, -
4.54e-44FFCP PHASE1:Mm9::chr2:74440187..74440209,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:74440187..74440209, -
4.54e-44FFCP PHASE2:Mm9::chr10:56515486..56515496,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr10:56515486..56515496, +