UBERON:0001851
From FANTOM5_SSTAR
Name: | cortex | |
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Namespace: | FANTOM | |
Definition: | "Outermost layer of an organ[WP]." [Wikipedia:Cortex_(anatomy)] | |
Xrefs: |
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Comments: | This class is used in a very general sense | |
Alt_id: | UBERON:FMA_61109-XAO_0000216 | |
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000064(organ part) |
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Children
is a: | UBERON:0001225 (cortex of kidney),UBERON:0001235 (adrenal cortex) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10493-107B7 (mesothelioma cell line:ACC-MESO-1)
- 10494-107B8 (mesothelioma cell line:ACC-MESO-4)
- 10810-111A9 (adrenal cortex adenocarcinoma cell line:SW-13)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
... further results Mouse (Mus musculus)
- 10493-107B7 (mesothelioma cell line:ACC-MESO-1)
- 10494-107B8 (mesothelioma cell line:ACC-MESO-4)
- 10810-111A9 (adrenal cortex adenocarcinoma cell line:SW-13)
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001851 (cortex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data