FFCP PHASE1:Hg19::chr16:75284758..75284802,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C611 | |||
|description=CAGE_peak_at_chr16:75284758..75284802,- | |||
|id=chr16:75284758..75284802,- | |||
|ontology_enrichment_celltype=CL:1000449!5.76e-14!16;CL:1000497!6.52e-14!18;CL:0002518!6.52e-14!18;CL:0002681!1.05e-10!13;CL:0002584!1.05e-10!13;CL:1000507!5.86e-10!12;CL:1000494!5.86e-10!12;CL:0000066!1.20e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.23e-21;17!CL:0002518;1.23e-21;17!CL:1000449;1.28e-19;15!CL:1000507;3.09e-17;10!CL:1000494;3.09e-17;10!CL:0002681;7.19e-14;12!CL:0002584;7.19e-14;12!CL:1000746;4.52e-11;7!CL:1000612;4.52e-11;7!CL:0000650;1.72e-10;2!CL:1000500;1.72e-10;2!CL:1000618;1.72e-10;2!CL:1001318;1.72e-10;2!CL:0002173;1.72e-10;2!CL:0000239;1.87e-07;3!CL:1000615;1.87e-07;3!CL:0002306;1.87e-07;3!CL:0000182;4.69e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.44e-21,17;CL:0002518,1.44e-21,17;CL:1000449,1.39e-19,15;CL:1000507,3.10e-17,10;CL:1000494,3.10e-17,10;CL:0002681,7.92e-14,12;CL:0002584,7.92e-14,12;CL:1000746,3.65e-11,7;CL:1000612,3.65e-11,7;CL:0000650,1.00e-10,2;CL:1000500,1.00e-10,2;CL:1000618,1.00e-10,2;CL:1001318,1.00e-10,2;CL:0002173,1.00e-10,2;CL:0000239,2.76e-07,3;CL:1000615,2.76e-07,3;CL:0002306,2.76e-07,3;CL:0000182,4.14e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.28e-18;13!UBERON:0004161;1.93e-16;11!UBERON:0003104;3.55e-14;31!UBERON:0001041;2.06e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.91e-16!347;UBERON:0006555!8.60e-15!17;UBERON:0005103!8.60e-15!17;UBERON:0000083!8.60e-15!17;UBERON:0009201!8.60e-15!17;UBERON:0004819!8.60e-15!17;UBERON:0006553!8.60e-15!17;UBERON:0003074!8.60e-15!17;UBERON:0003060!8.60e-15!17;UBERON:0004211!5.76e-14!16;UBERON:0001285!5.76e-14!16;UBERON:0007684!5.76e-14!16;UBERON:0003220!5.76e-14!16;UBERON:0004208!5.76e-14!16;UBERON:0003104!1.09e-13!238;UBERON:0009142!1.09e-13!238;UBERON:0000080!1.13e-13!18;UBERON:0002120!1.13e-13!18;UBERON:0004875!1.13e-13!18;UBERON:0005721!1.13e-13!18;UBERON:0005754!1.13e-13!18;UBERON:0007297!1.13e-13!18;UBERON:0004876!1.44e-13!20;UBERON:0003064!1.24e-12!37;UBERON:0005172!1.43e-12!55;UBERON:0005173!1.43e-12!55;UBERON:0000058!2.32e-12!26;UBERON:0003887!3.33e-12!21;UBERON:0009569!3.96e-12!113;UBERON:0006554!5.01e-12!44;UBERON:0002113!7.85e-12!27;UBERON:0003918!7.85e-12!27;UBERON:0005095!7.85e-12!27;UBERON:0007687!7.85e-12!27;UBERON:0005177!9.70e-12!107;UBERON:0001008!1.43e-11!45;UBERON:0002417!3.85e-11!61;UBERON:0000916!3.85e-11!61;UBERON:0002100!4.39e-11!216;UBERON:0003914!1.04e-10!118;UBERON:0001225!1.05e-10!13;UBERON:0008987!1.05e-10!13;UBERON:0000025!1.29e-10!194;UBERON:0000466!1.72e-10!126;UBERON:0004111!2.01e-10!241;UBERON:0004921!2.23e-10!129;UBERON:0004185!2.23e-10!129;UBERON:0005409!3.82e-10!35;UBERON:0009773!5.86e-10!12;UBERON:0001231!5.86e-10!12;UBERON:0004810!5.86e-10!12;UBERON:0005256!1.60e-09!143;UBERON:0001851!1.99e-09!16;UBERON:0000489!4.83e-09!32;UBERON:0000160!2.50e-08!27;UBERON:0000464!3.05e-08!104;UBERON:0000119!3.19e-08!312;UBERON:0000483!3.37e-08!309;UBERON:0001007!3.77e-08!155;UBERON:0001555!3.77e-08!155;UBERON:0007026!3.77e-08!155;UBERON:0004119!5.53e-08!169;UBERON:0000925!5.53e-08!169;UBERON:0006595!5.53e-08!169;UBERON:0003103!5.94e-08!69;UBERON:0000475!1.03e-07!365;UBERON:0000477!1.24e-07!286;UBERON:0003886!1.88e-07!63;UBERON:0000353!2.16e-07!17;UBERON:0000077!6.58e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.41e-22;24!UBERON:0011143;1.41e-22;24!UBERON:0006555;1.28e-19;15!UBERON:0004819;1.28e-19;15!UBERON:0001285;1.28e-19;15!UBERON:0007684;1.28e-19;15!UBERON:0000489;2.61e-18;29!UBERON:0006554;1.26e-17;30!UBERON:0001008;1.26e-17;30!UBERON:0004211;3.09e-17;10!UBERON:0009773;3.09e-17;10!UBERON:0001231;3.09e-17;10!UBERON:0004810;3.09e-17;10!UBERON:0000160;1.14e-16;17!UBERON:0005172;1.50e-16;52!UBERON:0005173;1.50e-16;52!UBERON:0005409;3.74e-16;22!UBERON:0001225;7.19e-14;12!UBERON:0008987;7.19e-14;12!UBERON:0000059;3.28e-11;11!UBERON:0000074;4.52e-11;7!UBERON:0001229;4.52e-11;7!UBERON:0001851;5.52e-11;15!UBERON:0000353;5.52e-11;15!UBERON:0003567;1.72e-10;2!UBERON:0003838;1.72e-10;2!UBERON:0003586;1.72e-10;2!UBERON:0005169;1.72e-10;2!UBERON:0002321;1.72e-10;2!UBERON:0005215;1.72e-10;2!UBERON:0002303;1.72e-10;2!UBERON:0002319;1.72e-10;2!UBERON:0004921;5.15e-10;33!UBERON:0002417;1.15e-09;58!UBERON:0000916;1.15e-09;58!UBERON:0002423;3.24e-09;25!UBERON:0001155;4.41e-09;9!UBERON:0006853;1.87e-07;3!UBERON:0007685;1.87e-07;3!UBERON:0004134;1.87e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,7.47e-23,54;UBERON:0005173,7.47e-23,54;UBERON:0002113,1.28e-20,26;UBERON:0003918,1.28e-20,26;UBERON:0011143,1.28e-20,26;UBERON:0005095,1.28e-20,26;UBERON:0007687,1.28e-20,26;UBERON:0002417,3.51e-20,60;UBERON:0000916,3.51e-20,60;UBERON:0004211,1.39e-19,15;UBERON:0009773,1.39e-19,15;UBERON:0001231,1.39e-19,15;UBERON:0001285,1.39e-19,15;UBERON:0007684,1.39e-19,15;UBERON:0004208,1.39e-19,15;UBERON:0006555,2.77e-18,16;UBERON:0004819,2.77e-18,16;UBERON:0004810,3.10e-17,10;UBERON:0000489,6.05e-17,31;UBERON:0000160,1.01e-16,17;UBERON:0005409,3.82e-14,25;UBERON:0001225,7.92e-14,12;UBERON:0008987,7.92e-14,12;UBERON:0005177,2.07e-13,101;UBERON:0006554,1.71e-12,47;UBERON:0001008,3.49e-12,48;UBERON:0000059,2.42e-11,11;UBERON:0010532,3.65e-11,7;UBERON:0000074,3.65e-11,7;UBERON:0001229,3.65e-11,7;UBERON:0001230,3.65e-11,7;UBERON:0003220,3.65e-11,7;UBERON:0005749,3.65e-11,7;UBERON:0004199,3.65e-11,7;UBERON:0004209,3.65e-11,7;UBERON:0004198,3.65e-11,7;UBERON:0001851,5.95e-11,15;UBERON:0000353,5.95e-11,15;UBERON:0003567,1.00e-10,2;UBERON:0003838,1.00e-10,2;UBERON:0003586,1.00e-10,2;UBERON:0005169,1.00e-10,2;UBERON:0002321,1.00e-10,2;UBERON:0005215,1.00e-10,2;UBERON:0002303,1.00e-10,2;UBERON:0002319,1.00e-10,2;UBERON:0009569,2.71e-10,112;UBERON:0003104,4.82e-10,160;UBERON:0009142,4.82e-10,160;UBERON:0005103,8.78e-10,8;UBERON:0000083,8.78e-10,8;UBERON:0009201,8.78e-10,8;UBERON:0006553,8.78e-10,8;UBERON:0003074,8.78e-10,8;UBERON:0003060,8.78e-10,8;UBERON:0009497,2.89e-09,25;UBERON:0000015,2.89e-09,25;UBERON:0002423,2.89e-09,25;UBERON:0006235,2.89e-09,25;UBERON:0004161,2.89e-09,25;UBERON:0001155,3.35e-09,9;UBERON:0000080,1.05e-08,9;UBERON:0002120,1.05e-08,9;UBERON:0004875,1.05e-08,9;UBERON:0005721,1.05e-08,9;UBERON:0005754,1.05e-08,9;UBERON:0007297,1.05e-08,9;UBERON:0004921,2.14e-08,118;UBERON:0003103,6.28e-08,68;UBERON:0008835,6.52e-08,22;UBERON:0003894,6.52e-08,22;UBERON:0009854,1.54e-07,23;UBERON:0003929,1.77e-07,54;UBERON:0003914,2.13e-07,117;UBERON:0006853,2.76e-07,3;UBERON:0007685,2.76e-07,3;UBERON:0004134,2.76e-07,3;UBERON:0001007,3.84e-07,145;UBERON:0001555,3.84e-07,145;UBERON:0007026,3.84e-07,145;UBERON:0004876,3.87e-07,11;UBERON:0002100,4.07e-07,199;UBERON:0007499,6.96e-07,25 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0.491467873003018,0.697801167972428,0,0.527533956456907,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.152826811495903,0.0821005894499457,0.550975469195755,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.263504357079378,1.30979075497713,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,1.10689594688802,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,1.48418066444991,0,0.177561725313127,0,0,0.232420756919918,1.32945394550784,0.802025881213139,0.184161977871793,0,0.182091168006717,0,0.902399225814824,0.693138033939733,6.27479815341484,2.92278449306521,0.527758144464379,1.13733384070897,0,0.431831832204279,1.54227252690289,1.89662506280697,1.50506932156456,1.01950509218015,0.831076008928724,2.0148727924996,0,0,0,0.656029291399411,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49137296979728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,3.9384658428634,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0.230850775511391,0,0.23056390438806,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.421996129056054,1.14262965711403,1.69623685720729,0,5.97157158647103,6.72277490225378,1.83309043480088,0,0,0,0,0,0,0,0.19566461893209,0,0.789168805698781,1.20990716048664,0,0,0,0,0,0,0.627865836814451,0,1.99226682220855,0,0,0,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0,0.316553979779393,0.195551382734803,0.0801588202515337,5.97668385270187,0.19980960958213,0.432271251462318,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,6.69657049611401,7.25259553754265,7.07737210468941,1.87012214878023,0,0,0,0,0,0,0,0,0.242998226632099,0,4.09789677955831,3.88163952198986,0.316801009558219,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0,3.22414914091781,0,0,0,1.02652102730598,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.310482014706917,0,0,0,0,0.235265819698172,0,0,0.447764408660622,0,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0.761610424337591,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0,0,0,0,0,0,1.53744911152768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.449604575675217,0,0,0,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.887136517302272,0.202612753855184,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0.135939465953663,0.394636641377094,0.354581522651905,0,0.156986185701028,0.314231179832004,0.280272163313789,2.73947616152849,1.29556554731173,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0.955538938977433,0.335566295393377,0.687051635306701,5.9739783241312,0,0,0,0,0,0,0,0,0,0,13.89134845943,0.874238242015829,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.160482733378337,2.19100916473955,0,0,0,0.203974470572744,0,3.7031878836078,0.371995018166751,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0.286888821570705,0,0,0,0,2.0659796484515,0,0,0,0,0,0 | |||
|short_description=p@chr16:75284758..75284802,- | |||
}} |
Revision as of 12:17, 20 January 2014
Short description: | p@chr16:75284758..75284802, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:75284758..75284802, - |
Coexpression cluster: | C611_small_hepatocellular_colon_adenocarcinoma_Intestinal_signet_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.44e-21 | 17 |
kidney epithelial cell | 1.44e-21 | 17 |
epithelial cell of nephron | 1.39e-19 | 15 |
kidney tubule cell | 3.10e-17 | 10 |
nephron tubule epithelial cell | 3.10e-17 | 10 |
kidney cortical cell | 7.92e-14 | 12 |
renal cortical epithelial cell | 7.92e-14 | 12 |
glomerular cell | 3.65e-11 | 7 |
kidney corpuscule cell | 3.65e-11 | 7 |
mesangial cell | 1.00e-10 | 2 |
kidney interstitial cell | 1.00e-10 | 2 |
juxtaglomerular complex cell | 1.00e-10 | 2 |
renal interstitial pericyte | 1.00e-10 | 2 |
extraglomerular mesangial cell | 1.00e-10 | 2 |
brush border epithelial cell | 2.76e-07 | 3 |
kidney cortex tubule cell | 2.76e-07 | 3 |
epithelial cell of proximal tubule | 2.76e-07 | 3 |
hepatocyte | 4.14e-07 | 12 |