FFCP PHASE1:Hg19::chr1:24118452..24118481,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:24118452..24118481,+ to FFCP PHASE1:Hg19::chr1:24118452..24118481,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11313 | |EntrezGene=11313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6738 | |HGNC=6738 | ||
|TSSclassifier=strong | |||
|UniProt=Q5QPN5 | |UniProt=Q5QPN5 | ||
|association_with_transcript=0bp_to_ENST00000421070,ENST00000492577_5end | |||
|cluster_id=chr1:24118452..24118481,+ | |||
|description=CAGE_peak_5_at_LYPLA2_5end | |||
|id=chr1:24118452..24118481,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.35e-34!254;CL:0002321!1.35e-21!248;CL:0000220!1.23e-20!246;CL:0000222!3.94e-11!119;CL:1000497!5.44e-10!18;CL:0002518!5.44e-10!18;CL:0000548!5.44e-10!679;CL:0000004!5.44e-10!679;CL:0000255!5.44e-10!679;CL:1000449!1.50e-09!16;CL:0000012!1.61e-09!682;CL:0002139!1.70e-09!24;CL:0002076!5.91e-09!43;CL:0000071!9.01e-09!18;CL:0002546!9.01e-09!18;CL:0000213!1.41e-08!57;CL:0000215!1.41e-08!57;CL:0002078!1.51e-08!44;CL:0000223!2.62e-08!59;CL:0002681!1.56e-07!13;CL:0002584!1.56e-07!13;CL:0000115!3.07e-07!35;CL:1000507!3.36e-07!12;CL:1000494!3.36e-07!12;CL:0000076!9.11e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.32e-21;15!CL:1000497;1.22e-18;17!CL:0002518;1.22e-18;17!CL:0002681;1.85e-16;12!CL:0002584;1.85e-16;12!CL:1000507;2.01e-16;10!CL:1000494;2.01e-16;10!CL:0002139;1.56e-11;24!CL:0000071;1.95e-11;18!CL:1000746;8.64e-11;7!CL:1000612;8.64e-11;7!CL:0002322;3.53e-10;5!CL:0000115;3.90e-10;36!CL:1000413;4.99e-10;9!CL:0002078;9.41e-10;45!CL:0000213;3.90e-08;58!CL:0000215;3.90e-08;58!CL:0002188;6.40e-07;5!CL:0002621;6.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.26e-21,15;CL:0000066,2.65e-19,253;CL:1000497,1.18e-18,17;CL:0002518,1.18e-18,17;CL:1000507,1.33e-16,10;CL:1000494,1.33e-16,10;CL:0002681,3.07e-16,12;CL:0002584,3.07e-16,12;CL:0002321,9.31e-15,250;CL:0002078,4.96e-13,45;CL:0000115,4.44e-12,36;CL:0002139,1.85e-11,24;CL:0000071,2.26e-11,18;CL:0002546,2.26e-11,18;CL:0000213,3.76e-11,58;CL:0000215,3.76e-11,58;CL:1000746,1.12e-10,7;CL:1000612,1.12e-10,7;CL:0002322,1.38e-10,5;CL:1000413,6.12e-10,9;CL:0000222,4.16e-09,121;CL:0002188,8.76e-07,5;CL:0000076,9.40e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.95e-11;18 | |||
|ontology_enrichment_disease=DOID:305!1.15e-09!106;DOID:0050687!1.09e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!3.03e-13!44;UBERON:0001008!1.37e-12!45;UBERON:0002113!3.46e-12!27;UBERON:0003918!3.46e-12!27;UBERON:0005095!3.46e-12!27;UBERON:0007687!3.46e-12!27;UBERON:0003914!1.16e-11!118;UBERON:0003104!1.23e-10!238;UBERON:0009142!1.23e-10!238;UBERON:0000080!7.68e-10!18;UBERON:0002120!7.68e-10!18;UBERON:0004875!7.68e-10!18;UBERON:0005721!7.68e-10!18;UBERON:0005754!7.68e-10!18;UBERON:0007297!7.68e-10!18;UBERON:0000487!9.08e-10!22;UBERON:0000489!9.53e-10!32;UBERON:0006555!1.19e-09!17;UBERON:0005103!1.19e-09!17;UBERON:0000083!1.19e-09!17;UBERON:0009201!1.19e-09!17;UBERON:0004819!1.19e-09!17;UBERON:0006553!1.19e-09!17;UBERON:0003074!1.19e-09!17;UBERON:0003060!1.19e-09!17;UBERON:0004211!1.50e-09!16;UBERON:0001285!1.50e-09!16;UBERON:0007684!1.50e-09!16;UBERON:0003220!1.50e-09!16;UBERON:0004208!1.50e-09!16;UBERON:0006914!2.70e-09!25;UBERON:0000058!6.65e-09!26;UBERON:0001986!9.01e-09!18;UBERON:0004638!9.01e-09!18;UBERON:0004852!9.01e-09!18;UBERON:0003887!1.16e-08!21;UBERON:0000119!3.10e-08!312;UBERON:0004876!4.51e-08!20;UBERON:0002100!4.51e-08!216;UBERON:0003064!5.05e-08!37;UBERON:0000481!7.18e-08!347;UBERON:0000483!7.39e-08!309;UBERON:0000490!1.18e-07!138;UBERON:0003103!1.21e-07!69;UBERON:0001225!1.56e-07!13;UBERON:0008987!1.56e-07!13;UBERON:0001851!2.95e-07!16;UBERON:0005256!3.36e-07!143;UBERON:0009773!3.36e-07!12;UBERON:0001231!3.36e-07!12;UBERON:0004810!3.36e-07!12;UBERON:0005172!4.79e-07!55;UBERON:0005173!4.79e-07!55;UBERON:0005177!5.51e-07!107;UBERON:0000922!7.49e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.32e-21;15!UBERON:0004819;1.32e-21;15!UBERON:0001285;1.32e-21;15!UBERON:0007684;1.32e-21;15!UBERON:0006554;2.44e-18;30!UBERON:0001008;2.44e-18;30!UBERON:0001225;1.85e-16;12!UBERON:0008987;1.85e-16;12!UBERON:0004211;2.01e-16;10!UBERON:0009773;2.01e-16;10!UBERON:0001231;2.01e-16;10!UBERON:0004810;2.01e-16;10!UBERON:0002113;2.26e-16;24!UBERON:0011143;2.26e-16;24!UBERON:0001851;1.59e-15;15!UBERON:0000489;8.42e-15;29!UBERON:0000487;4.60e-13;22!UBERON:0000353;1.12e-12;15!UBERON:0004638;1.95e-11;18!UBERON:0001986;1.95e-11;18!UBERON:0004852;1.95e-11;18!UBERON:0006914;4.24e-11;25!UBERON:0000074;8.64e-11;7!UBERON:0001229;8.64e-11;7!UBERON:0003915;4.99e-10;9!UBERON:0004700;4.99e-10;9!UBERON:0001917;4.99e-10;9!UBERON:0003914;2.62e-09;74!UBERON:0000490;3.15e-08;33!UBERON:0000025;5.81e-08;93!UBERON:0003103;8.44e-08;61!UBERON:0001949;6.82e-07;3 | |||
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| ||
|short_description=p5@LYPLA2 | |||
}} | }} |
Latest revision as of 17:31, 16 September 2015
Short description: | p5@LYPLA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LYPLA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000421070, ENST00000492577_5end |
EntrezGene: | LYPLA2 |
HGNC: | 6738 |
UniProt: | Q5QPN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.26e-21 | 15 |
epithelial cell | 2.65e-19 | 253 |
kidney cell | 1.18e-18 | 17 |
kidney epithelial cell | 1.18e-18 | 17 |
kidney tubule cell | 1.33e-16 | 10 |
nephron tubule epithelial cell | 1.33e-16 | 10 |
kidney cortical cell | 3.07e-16 | 12 |
renal cortical epithelial cell | 3.07e-16 | 12 |
embryonic cell | 9.31e-15 | 250 |
meso-epithelial cell | 4.96e-13 | 45 |
endothelial cell | 4.44e-12 | 36 |
endothelial cell of vascular tree | 1.85e-11 | 24 |
blood vessel endothelial cell | 2.26e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.26e-11 | 18 |
lining cell | 3.76e-11 | 58 |
barrier cell | 3.76e-11 | 58 |
glomerular cell | 1.12e-10 | 7 |
kidney corpuscule cell | 1.12e-10 | 7 |
embryonic stem cell | 1.38e-10 | 5 |
endothelial cell of artery | 6.12e-10 | 9 |
mesodermal cell | 4.16e-09 | 121 |
glomerular endothelial cell | 8.76e-07 | 5 |
squamous epithelial cell | 9.40e-07 | 63 |