CL:0002188

Name:	glomerular endothelial cell
Namespace:	FANTOM
Definition:	"An endothelial cell found in the glomerulus of the kidney. This cell is flattened, highly fenestrated, and plays a vital role in the formation of glomerular ultrafiltrate." [GOC:tfm, PMID:15840009]
Xrefs:	Expandlinks: BTO:0004632 FMA:70970
Created by:	tmeehan
Creation date:	2010-08-26T10:59:44Z

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000115(endothelial cell),CL:0000666(fenestrated cell),CL:1000746(glomerular cell)
part_of:	UBERON:0000074(renal glomerulus)

Children

derives from:	FF:0000153 (human renal glomerular endothelial cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
• 11590-120G6 (Alveolar Epithelial Cells, donor2)
• 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
• 11675-122H1 (Renal Glomerular Endothelial Cells, donor3)
• 11783-124B1 (Renal Glomerular Endothelial Cells, donor4)

Mouse (Mus musculus)

• 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
• 11590-120G6 (Alveolar Epithelial Cells, donor2)
• 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
• 11675-122H1 (Renal Glomerular Endothelial Cells, donor3)
• 11783-124B1 (Renal Glomerular Endothelial Cells, donor4)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002188 (glomerular endothelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
6.64e-89	FFCP PHASE2:Hg19::chr2:120409486..120409492,+	p@chr2:120409486..120409492, +
6.64e-89	FFCP PHASE1:Hg19::chr2:120409486..120409492,+	p@chr2:120409486..120409492, +
6.45e-51	FFCP PHASE2:Hg19::chr17:79426453..79426462,+	p@chr17:79426453..79426462, +
6.45e-51	FFCP PHASE1:Hg19::chr17:79426453..79426462,+	p@chr17:79426453..79426462, +
7.65e-51	FFCP PHASE1:Hg19::chr8:77557753..77557755,-	p@chr8:77557753..77557755, -
7.65e-51	FFCP PHASE2:Hg19::chr8:77557753..77557755,-	p@chr8:77557753..77557755, -
1.48e-40	FFCP PHASE1:Hg19::chr1:42777312..42777314,+	p@chr1:42777312..42777314, +
1.48e-40	FFCP PHASE1:Hg19::chr2:26700984..26700993,-	p7@OTOF
1.48e-40	FFCP PHASE1:Hg19::chr2:26700331..26700340,-	p@chr2:26700331..26700340, -
1.48e-40	FFCP PHASE2:Hg19::chr6:18225523..18225534,-	p@chr6:18225523..18225534, -
1.48e-40	FFCP PHASE2:Hg19::chr22:47030082..47030087,+	p@chr22:47030082..47030087, +
1.48e-40	FFCP PHASE1:Hg19::chr6:18225523..18225534,-	p@chr6:18225523..18225534, -
1.48e-40	FFCP PHASE2:Hg19::chr2:26700984..26700993,-	p7@OTOF
1.48e-40	FFCP PHASE2:Hg19::chr1:42777312..42777314,+	p@chr1:42777312..42777314, +
1.48e-40	FFCP PHASE1:Hg19::chr22:47030082..47030087,+	p@chr22:47030082..47030087, +
1.48e-40	FFCP PHASE2:Hg19::chr2:26700331..26700340,-	p@chr2:26700331..26700340, -
2.23e-37	FFCP PHASE1:Hg19::chr10:3477893..3477912,-	p@chr10:3477893..3477912, -
2.23e-37	FFCP PHASE2:Hg19::chr10:3477893..3477912,-	p@chr10:3477893..3477912, -
3.93e-36	FFCP PHASE2:Hg19::chrX:128782722..128782738,-	p5@APLN
3.93e-36	FFCP PHASE1:Hg19::chrX:128782722..128782738,-	p5@APLN
5.92e-36	FFCP PHASE1:Hg19::chr1:172926077..172926120,-	p@chr1:172926077..172926120, -
5.92e-36	FFCP PHASE2:Hg19::chr1:172926077..172926120,-	p@chr1:172926077..172926120, -
1.44e-32	FFCP PHASE2:Hg19::chr6:84849252..84849259,+	p@chr6:84849252..84849259, +
1.44e-32	FFCP PHASE1:Hg19::chr6:84849252..84849259,+	p@chr6:84849252..84849259, +
1.7e-32	FFCP PHASE2:Hg19::chr7:28998254..28998261,-	p10@TRIL
1.7e-32	FFCP PHASE1:Hg19::chr7:28998254..28998261,-	p10@TRIL
1.99e-32	FFCP PHASE2:Hg19::chr15:85403302..85403304,+	p@chr15:85403302..85403304, +
1.99e-32	FFCP PHASE2:Hg19::chr7:4051097..4051112,+	p@chr7:4051097..4051112, +
1.99e-32	FFCP PHASE1:Hg19::chr15:85403302..85403304,+	p@chr15:85403302..85403304, +
1.99e-32	FFCP PHASE1:Hg19::chr7:4051097..4051112,+	p@chr7:4051097..4051112, +
1.91e-30	FFCP PHASE2:Hg19::chr5:148651758..148651769,-	p@chr5:148651758..148651769, -
1.91e-30	FFCP PHASE1:Hg19::chr5:148651758..148651769,-	p@chr5:148651758..148651769, -
9.41e-29	FFCP PHASE1:Hg19::chr1:32712897..32712909,+	p3@FAM167B
9.41e-29	FFCP PHASE2:Hg19::chr1:32712897..32712909,+	p3@FAM167B
3.34e-28	FFCP PHASE1:Hg19::chr11:124628392..124628427,-	p@chr11:124628392..124628427, -
3.34e-28	FFCP PHASE2:Hg19::chr11:124628392..124628427,-	p@chr11:124628392..124628427, -
3.85e-28	FFCP PHASE2:Hg19::chr3:98591021..98591026,-	p1@ENST00000487339
3.85e-28	FFCP PHASE1:Hg19::chr3:98591021..98591026,-	p1@ENST00000487339
5.46e-28	FFCP PHASE2:Hg19::chr4:38057595..38057624,-	p@chr4:38057595..38057624, -
5.46e-28	FFCP PHASE1:Hg19::chr4:38057595..38057624,-	p@chr4:38057595..38057624, -
5.82e-28	FFCP PHASE1:Hg19::chr19:47231340..47231383,-	p@chr19:47231340..47231383, -
5.82e-28	FFCP PHASE2:Hg19::chr19:47231340..47231383,-	p@chr19:47231340..47231383, -
2.72e-27	FFCP PHASE1:Hg19::chr15:36653709..36653720,-	p@chr15:36653709..36653720, -
2.72e-27	FFCP PHASE2:Hg19::chr15:36653709..36653720,-	p@chr15:36653709..36653720, -
2.72e-27	FFCP PHASE2:Hg19::chr9:35753821..35753835,-	p@chr9:35753821..35753835, -
2.72e-27	FFCP PHASE1:Hg19::chr9:35753821..35753835,-	p@chr9:35753821..35753835, -
3.11e-27	FFCP PHASE2:Hg19::chr4:145568170..145568180,-	p@chr4:145568170..145568180, -
3.11e-27	FFCP PHASE1:Hg19::chr4:145568170..145568180,-	p@chr4:145568170..145568180, -
3.95e-27	FFCP PHASE1:Hg19::chr12:52306196..52306215,+	p6@ACVRL1
3.95e-27	FFCP PHASE2:Hg19::chr12:52306196..52306215,+	p6@ACVRL1
4.06e-27	FFCP PHASE2:Hg19::chr19:38397228..38397266,-	p1@WDR87
4.06e-27	FFCP PHASE1:Hg19::chr19:38397228..38397266,-	p1@WDR87
4.63e-27	FFCP PHASE1:Hg19::chr14:91270270..91270281,-	p@chr14:91270270..91270281, -
4.63e-27	FFCP PHASE2:Hg19::chr14:91270270..91270281,-	p@chr14:91270270..91270281, -
8.99e-27	FFCP PHASE1:Hg19::chr3:43538305..43538325,-	p@chr3:43538305..43538325, -
8.99e-27	FFCP PHASE2:Hg19::chr3:43538305..43538325,-	p@chr3:43538305..43538325, -
2.12e-25	FFCP PHASE2:Hg19::chr1:94713418..94713436,+	p1@ENST00000413103
2.12e-25	FFCP PHASE1:Hg19::chr1:94713418..94713436,+	p1@ENST00000413103
4.76e-25	FFCP PHASE2:Hg19::chr11:940729..940745,+	p5@AP2A2
4.76e-25	FFCP PHASE1:Hg19::chr11:940729..940745,+	p5@AP2A2
5.73e-25	FFCP PHASE2:Hg19::chr19:42007093..42007107,-	p@chr19:42007093..42007107, -
5.73e-25	FFCP PHASE1:Hg19::chr19:42007093..42007107,-	p@chr19:42007093..42007107, -
6.15e-25	FFCP PHASE2:Hg19::chrX:128781853..128781866,-	p@chrX:128781853..128781866, -
6.15e-25	FFCP PHASE1:Hg19::chrX:128781853..128781866,-	p@chrX:128781853..128781866, -
1.2e-23	FFCP PHASE1:Hg19::chrX:128781635..128781648,-	p@chrX:128781635..128781648, -
1.2e-23	FFCP PHASE2:Hg19::chrX:128781635..128781648,-	p@chrX:128781635..128781648, -
1.61e-23	FFCP PHASE1:Hg19::chr17:61560490..61560500,+	p@chr17:61560490..61560500, +
1.61e-23	FFCP PHASE2:Hg19::chr17:61560490..61560500,+	p@chr17:61560490..61560500, +
1.7e-23	FFCP PHASE2:Hg19::chr5:55422645..55422665,-	p@chr5:55422645..55422665, -
1.7e-23	FFCP PHASE1:Hg19::chr5:55422645..55422665,-	p@chr5:55422645..55422665, -
2.21e-23	FFCP PHASE1:Hg19::chr16:66422312..66422316,+	p@chr16:66422312..66422316, +
2.21e-23	FFCP PHASE2:Hg19::chr16:66422312..66422316,+	p@chr16:66422312..66422316, +
4.96e-23	FFCP PHASE2:Hg19::chr19:4639579..4639589,+	p2@TNFAIP8L1
4.96e-23	FFCP PHASE1:Hg19::chr19:4639579..4639589,+	p2@TNFAIP8L1
7.94e-23	FFCP PHASE1:Hg19::chr4:55981146..55981149,-	p@chr4:55981146..55981149, -
7.94e-23	FFCP PHASE2:Hg19::chr4:55981146..55981149,-	p@chr4:55981146..55981149, -
7.92e-22	FFCP PHASE2:Hg19::chr16:66413317..66413328,+	p1@AB385138
7.92e-22	FFCP PHASE1:Hg19::chr16:66413317..66413328,+	p1@AB385138
7.94e-22	FFCP PHASE1:Hg19::chrX:10544929..10544941,-	p14@MID1
7.94e-22	FFCP PHASE2:Hg19::chrX:10544929..10544941,-	p14@MID1
1.2e-21	FFCP PHASE1:Hg19::chr19:45226115..45226126,-	p@chr19:45226115..45226126, -
1.2e-21	FFCP PHASE2:Hg19::chr19:45226115..45226126,-	p@chr19:45226115..45226126, -
2.25e-21	FFCP PHASE2:Hg19::chr17:755468..755471,+	p@chr17:755468..755471, +
2.25e-21	FFCP PHASE1:Hg19::chr17:755468..755471,+	p@chr17:755468..755471, +
2.66e-21	FFCP PHASE2:Hg19::chr9:139543390..139543404,+	p@chr9:139543390..139543404, +
2.66e-21	FFCP PHASE1:Hg19::chr9:139543390..139543404,+	p@chr9:139543390..139543404, +
4.21e-21	FFCP PHASE1:Hg19::chr2:26700923..26700934,-	p9@OTOF
4.21e-21	FFCP PHASE2:Hg19::chr2:26700923..26700934,-	p9@OTOF
5.15e-21	FFCP PHASE1:Hg19::chr18:34376781..34376791,-	p@chr18:34376781..34376791, -
5.15e-21	FFCP PHASE1:Hg19::chr3:4898478..4898486,-	p1@ENST00000465436
5.15e-21	FFCP PHASE1:Hg19::chr16:2069979..2069989,+	p7@NPW
5.15e-21	FFCP PHASE1:Hg19::chr17:79166314..79166323,-	p@chr17:79166314..79166323, -
5.15e-21	FFCP PHASE1:Hg19::chr19:884982..884988,-	p@chr19:884982..884988, -
5.15e-21	FFCP PHASE2:Hg19::chr6:12958098..12958105,+	p30@PHACTR1
5.15e-21	FFCP PHASE1:Hg19::chr16:52028463..52028468,-	p@chr16:52028463..52028468, -
5.15e-21	FFCP PHASE2:Hg19::chr8:40010804..40010814,+	p3@C8orf4
5.15e-21	FFCP PHASE1:Hg19::chr18:74204885..74204892,-	p@chr18:74204885..74204892, -
5.15e-21	FFCP PHASE1:Hg19::chr1:52498542..52498551,-	p@chr1:52498542..52498551, -
5.15e-21	FFCP PHASE2:Hg19::chr16:2069979..2069989,+	p7@NPW
5.15e-21	FFCP PHASE1:Hg19::chr16:52028472..52028487,-	p@chr16:52028472..52028487, -

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