UBERON:0004852
From FANTOM5_SSTAR
Name: | cardiovascular system endothelium | |
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Namespace: | FANTOM | |
Definition: | "An endothelium that is part of the cardiovascular system." [UBERON:cjm] | |
Xrefs: |
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Comments: | consider merging with 'endothelium' | |
Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0001986(endothelium) |
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part_of: | UBERON:0004535(cardiovascular system) |
Children
is a: | UBERON:0004638 (blood vessel endothelium),UBERON:0004700 (arterial system endothelium) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
- 11265-116G5 (Endothelial Cells - Microvascular, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11267-116G7 (Endothelial Cells - Vein, donor1)
- 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
- 11340-117F8 (Endothelial Cells - Aortic, donor2)
- 11341-117F9 (Endothelial Cells - Artery, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004852 (cardiovascular system endothelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data