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CL:0002322

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Name:embryonic stem cell
Namespace:FANTOM
Definition:"A stem cell of embryonic origin." [GOC:dsd, GOC:tfm, ISBN:068340007X, PMID:18179856]
Xrefs:
links:

BTO:0001086

FMA:82841
Synonyms: "ESC" EXACT []
Comments:This is an in vitro cell type and may be removed in future releases. These cells are reportedly SSEA-4-positive, CD73-negative, and CD324-positive.
Created by:tmeehan
Creation date:2010-09-15T03:44:35Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000034(stem cell),CL:0002321(embryonic cell)



Children


derives from:FF:0101581 (embryonic stem cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 12626-134E7 (H9 Embryonic Stem cells, biol_rep1 (H9ES-1))
  • 12627-134E8 (H9 Embryoid body cells, melanocytic induction)
  • 12628-134E9 (H9 Embryoid body cells, melanocytic induction)
  • 12629-134F1 (H9 Embryoid body cells, melanocytic induction)
  • 12630-134F2 (H9 Embryoid body cells, melanocytic induction)
  • 12631-134F3 (H9 Embryoid body cells, melanocytic induction)
  • 12632-134F4 (H9 Embryoid body cells, melanocytic induction)
  • 12633-134F5 (H9 Embryoid body cells, melanocytic induction)
  • 12634-134F6 (H9 Embryoid body cells, melanocytic induction)
  • 12635-134F7 (H9 Embryoid body cells, melanocytic induction)

... further results Mouse (Mus musculus)

  • 12626-134E7 (H9 Embryonic Stem cells, biol_rep1 (H9ES-1))
  • 12627-134E8 (H9 Embryoid body cells, melanocytic induction)
  • 12628-134E9 (H9 Embryoid body cells, melanocytic induction)
  • 12629-134F1 (H9 Embryoid body cells, melanocytic induction)
  • 12630-134F2 (H9 Embryoid body cells, melanocytic induction)
  • 12631-134F3 (H9 Embryoid body cells, melanocytic induction)
  • 12632-134F4 (H9 Embryoid body cells, melanocytic induction)
  • 12633-134F5 (H9 Embryoid body cells, melanocytic induction)
  • 12634-134F6 (H9 Embryoid body cells, melanocytic induction)
  • 12635-134F7 (H9 Embryoid body cells, melanocytic induction)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002322 (embryonic stem cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data