FFCP PHASE1:Hg19::chr17:46667774..46667790,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:46667774..46667790,+ to FFCP PHASE1:Hg19::chr17:46667774..46667790,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000476204_5end | |||
|cluster_id=chr17:46667774..46667790,+ | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_1_at_ENST00000476204_5end | |||
|id=chr17:46667774..46667790,+ | |||
|ontology_enrichment_celltype=CL:1000449!3.24e-16!16;CL:1000507!4.80e-15!12;CL:1000494!4.80e-15!12;CL:1000497!7.02e-14!18;CL:0002518!7.02e-14!18;CL:0002681!1.31e-12!13;CL:0002584!1.31e-12!13;CL:0000669!9.46e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.07e-19;10!CL:1000494;1.07e-19;10!CL:1000449;1.20e-17;15!CL:1000497;3.26e-15;17!CL:0002518;3.26e-15;17!CL:0002681;2.48e-12;12!CL:0002584;2.48e-12;12!CL:0000669;1.15e-08;4!CL:0002504;5.76e-08;3!CL:1000279;5.76e-08;3!CL:1000280;5.76e-08;3!CL:0000239;2.79e-07;3!CL:1000615;2.79e-07;3!CL:0002306;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.12e-19,10;CL:1000494,1.12e-19,10;CL:1000449,1.21e-17,15;CL:1000497,3.27e-15,17;CL:0002518,3.27e-15,17;CL:0002681,2.44e-12,12;CL:0002584,2.44e-12,12;CL:0000669,1.18e-08,4;CL:0002504,5.84e-08,3;CL:1000279,5.84e-08,3;CL:1000280,5.84e-08,3;CL:0000239,2.95e-07,3;CL:1000615,2.95e-07,3;CL:0002306,2.95e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!8.80e-20!32;UBERON:0002113!1.25e-19!27;UBERON:0003918!1.25e-19!27;UBERON:0005095!1.25e-19!27;UBERON:0007687!1.25e-19!27;UBERON:0003887!9.01e-19!21;UBERON:0000080!1.30e-18!18;UBERON:0002120!1.30e-18!18;UBERON:0004875!1.30e-18!18;UBERON:0005721!1.30e-18!18;UBERON:0005754!1.30e-18!18;UBERON:0007297!1.30e-18!18;UBERON:0006555!1.65e-17!17;UBERON:0005103!1.65e-17!17;UBERON:0000083!1.65e-17!17;UBERON:0009201!1.65e-17!17;UBERON:0004819!1.65e-17!17;UBERON:0006553!1.65e-17!17;UBERON:0003074!1.65e-17!17;UBERON:0003060!1.65e-17!17;UBERON:0002417!2.17e-16!61;UBERON:0000916!2.17e-16!61;UBERON:0004211!3.24e-16!16;UBERON:0001285!3.24e-16!16;UBERON:0007684!3.24e-16!16;UBERON:0003220!3.24e-16!16;UBERON:0004208!3.24e-16!16;UBERON:0004876!3.50e-16!20;UBERON:0009773!4.80e-15!12;UBERON:0001231!4.80e-15!12;UBERON:0004810!4.80e-15!12;UBERON:0009569!4.86e-15!113;UBERON:0000058!1.28e-14!26;UBERON:0006554!1.54e-14!44;UBERON:0001008!5.03e-14!45;UBERON:0005177!1.15e-13!107;UBERON:0000464!1.15e-13!104;UBERON:0003886!8.05e-13!63;UBERON:0001225!1.31e-12!13;UBERON:0008987!1.31e-12!13;UBERON:0005172!3.66e-12!55;UBERON:0005173!3.66e-12!55;UBERON:0002100!1.09e-11!216;UBERON:0000466!1.13e-11!126;UBERON:0000059!1.39e-11!11;UBERON:0003064!3.60e-11!37;UBERON:0002553!1.41e-10!70;UBERON:0003104!4.42e-10!238;UBERON:0009142!4.42e-10!238;UBERON:0005409!7.80e-10!35;UBERON:0001851!1.33e-09!16;UBERON:0001155!4.19e-09!9;UBERON:0000353!7.65e-09!17;UBERON:0000160!5.37e-08!27;UBERON:0003103!3.49e-07!69;UBERON:0003688!3.93e-07!6;UBERON:0002358!3.93e-07!6;UBERON:0003684!3.93e-07!6;UBERON:0001178!3.93e-07!6;UBERON:0005256!5.77e-07!143;UBERON:0004457!7.02e-07!12;UBERON:0000042!7.02e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.07e-19;10!UBERON:0009773;1.07e-19;10!UBERON:0001231;1.07e-19;10!UBERON:0004810;1.07e-19;10!UBERON:0002113;6.94e-19;24!UBERON:0011143;6.94e-19;24!UBERON:0006555;1.20e-17;15!UBERON:0004819;1.20e-17;15!UBERON:0001285;1.20e-17;15!UBERON:0007684;1.20e-17;15!UBERON:0000059;6.38e-15;11!UBERON:0000489;7.23e-15;29!UBERON:0006554;3.16e-14;30!UBERON:0001008;3.16e-14;30!UBERON:0001225;2.48e-12;12!UBERON:0008987;2.48e-12;12!UBERON:0000160;3.12e-12;17!UBERON:0001155;3.63e-11;9!UBERON:0005409;7.57e-11;22!UBERON:0001851;1.70e-09;15!UBERON:0000353;1.70e-09;15!UBERON:0006947;2.73e-07;3!UBERON:0004054;2.73e-07;3!UBERON:0006853;2.79e-07;3!UBERON:0007685;2.79e-07;3!UBERON:0004134;2.79e-07;3!UBERON:0005172;3.00e-07;52!UBERON:0005173;3.00e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.68e-22,26;UBERON:0003918,3.68e-22,26;UBERON:0011143,3.68e-22,26;UBERON:0005095,3.68e-22,26;UBERON:0007687,3.68e-22,26;UBERON:0004810,1.12e-19,10;UBERON:0006555,1.45e-19,16;UBERON:0004819,1.45e-19,16;UBERON:0000489,9.43e-18,31;UBERON:0004211,1.21e-17,15;UBERON:0009773,1.21e-17,15;UBERON:0001231,1.21e-17,15;UBERON:0001285,1.21e-17,15;UBERON:0007684,1.21e-17,15;UBERON:0004208,1.21e-17,15;UBERON:0000059,6.30e-15,11;UBERON:0002417,1.88e-13,60;UBERON:0000916,1.88e-13,60;UBERON:0006554,1.24e-12,47;UBERON:0003104,1.64e-12,160;UBERON:0009142,1.64e-12,160;UBERON:0001225,2.44e-12,12;UBERON:0008987,2.44e-12,12;UBERON:0009569,2.83e-12,112;UBERON:0001008,2.95e-12,48;UBERON:0000160,3.46e-12,17;UBERON:0001155,3.55e-11,9;UBERON:0005172,1.89e-10,54;UBERON:0005173,1.89e-10,54;UBERON:0005177,6.71e-10,101;UBERON:0001851,1.68e-09,15;UBERON:0000353,1.68e-09,15;UBERON:0005409,3.10e-09,25;UBERON:0002100,1.27e-08,199;UBERON:0000080,5.93e-08,9;UBERON:0002120,5.93e-08,9;UBERON:0004875,5.93e-08,9;UBERON:0005721,5.93e-08,9;UBERON:0005754,5.93e-08,9;UBERON:0007297,5.93e-08,9;UBERON:0006947,2.77e-07,3;UBERON:0004054,2.77e-07,3;UBERON:0006853,2.95e-07,3;UBERON:0007685,2.95e-07,3;UBERON:0004134,2.95e-07,3;UBERON:0003103,3.05e-07,68 | |||
|phase1_expression=0,0,1.26858963686374,1.0007329835313,1.78784437770915,0,0,1.26343974685366,1.56711376919903,10.8122932060664,3.48900583986214,0,0,0.618831764800233,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64393548606981,6.3414629267633,5.98929894162087,5.19667984798319,0,0,0,0,0,4.55080680969013,10.7792721272436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72573730275545,5.55390929418832,0,0,0,0,0,0,0,0,0,0,0,1.04574548582567,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,1.41849132023278,0,0.285955987316295,1.62786481617433,7.40916303102692,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,11.0037514633129,5.15403545029498,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,2.74121620447837,2.40200396667599,0,0,0,0,1.66435439510497,0,0,0,0.561320188866147,0.768834895534206,6.14048698880044,0.64341568457443,0,1.54209693802656,0.177561725313127,0.739144404124282,0,1.97557643381931,1.69203229428271,0,0,0,0,0.393373244878272,1.80479845162965,1.23224539367064,14.1182958451834,18.9980992049239,3.0609972378934,0,0.340187410553031,0.215915916102139,1.54227252690289,5.41892875087706,10.0337954770971,5.09752546090077,4.98645605357235,23.2829744911065,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0.551346289938122,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,23.2866990093314,8.98671874871233,0,0,17.8073733007482,19.4921291112599,30.5134122075328,0,0,0,0.48763373908959,0,0,0.545999645631943,0,0,1.10273068709225,0,0,2.89387767133344,3.9353685122798,0,0.30982349809975,0,7.17056761020257,1.96498082026242,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,4.44514523720154,0,32.8532698392747,0,0,22.557102938106,2.20079311142084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39858678932185,0,0.296964680832639,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,3.07303986298317,0.344743373241465,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,9.95261931078505,9.19958670834727,1.83309043480088,0,0,0,0,0,0,0,0,0.242780379534093,6.31335044559025,0,0,0,5.11099626009275,12.0278302020807,0,0,0,0,47.2451846409456,1.52542140314453,0,0,0,18.3463001654132,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0.114536596165916,10.8104848653038,0,1.49103042678519,0,29.8989253361951,29.2887969674533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,19.8043114196672,0,0,0,0.78741985211799,0,0,0,0,0,0.415440338029185,0,0,0,0,7.17131936422703,18.3066512591143,0.844802692155252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,7.68081451637373,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.797525143673985,0.521745061811734,0,0.380805212168795,0.406870733204662,0,0,0,0.796191777397232,0,7.55470551402144,5.72474130902062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,442.715623801865,0,2.7562092961788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,7.91420599618293,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,10.3700700426102,11.8710633666234,0,0,0,0,7.55569264892814,3.12944890144643,0.801711364730253,0,0,0,0,0,0,4.65725755210022,0,2.17144469965024,3.82215575590973,0,6.67421588583652,0,0,0,0,0,122.584278854143,0,0.118920090777569,0,0,39.7032278580351,0.231522474323834,0.437119121007915,139.684237019372,0,75.6521716196219,0.196308467114945,0,0.8453114551668,0,0.281951753939561,0.709036767709349,0,0,0,0,0.730336388246517,0,0,25.5589930752959,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0.201273793591026,0 | |phase1_expression=0,0,1.26858963686374,1.0007329835313,1.78784437770915,0,0,1.26343974685366,1.56711376919903,10.8122932060664,3.48900583986214,0,0,0.618831764800233,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64393548606981,6.3414629267633,5.98929894162087,5.19667984798319,0,0,0,0,0,4.55080680969013,10.7792721272436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72573730275545,5.55390929418832,0,0,0,0,0,0,0,0,0,0,0,1.04574548582567,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,1.41849132023278,0,0.285955987316295,1.62786481617433,7.40916303102692,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,11.0037514633129,5.15403545029498,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,2.74121620447837,2.40200396667599,0,0,0,0,1.66435439510497,0,0,0,0.561320188866147,0.768834895534206,6.14048698880044,0.64341568457443,0,1.54209693802656,0.177561725313127,0.739144404124282,0,1.97557643381931,1.69203229428271,0,0,0,0,0.393373244878272,1.80479845162965,1.23224539367064,14.1182958451834,18.9980992049239,3.0609972378934,0,0.340187410553031,0.215915916102139,1.54227252690289,5.41892875087706,10.0337954770971,5.09752546090077,4.98645605357235,23.2829744911065,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0.551346289938122,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,23.2866990093314,8.98671874871233,0,0,17.8073733007482,19.4921291112599,30.5134122075328,0,0,0,0.48763373908959,0,0,0.545999645631943,0,0,1.10273068709225,0,0,2.89387767133344,3.9353685122798,0,0.30982349809975,0,7.17056761020257,1.96498082026242,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,4.44514523720154,0,32.8532698392747,0,0,22.557102938106,2.20079311142084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39858678932185,0,0.296964680832639,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,3.07303986298317,0.344743373241465,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,9.95261931078505,9.19958670834727,1.83309043480088,0,0,0,0,0,0,0,0,0.242780379534093,6.31335044559025,0,0,0,5.11099626009275,12.0278302020807,0,0,0,0,47.2451846409456,1.52542140314453,0,0,0,18.3463001654132,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0.114536596165916,10.8104848653038,0,1.49103042678519,0,29.8989253361951,29.2887969674533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,19.8043114196672,0,0,0,0.78741985211799,0,0,0,0,0,0.415440338029185,0,0,0,0,7.17131936422703,18.3066512591143,0.844802692155252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,7.68081451637373,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.797525143673985,0.521745061811734,0,0.380805212168795,0.406870733204662,0,0,0,0.796191777397232,0,7.55470551402144,5.72474130902062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,442.715623801865,0,2.7562092961788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,7.91420599618293,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,10.3700700426102,11.8710633666234,0,0,0,0,7.55569264892814,3.12944890144643,0.801711364730253,0,0,0,0,0,0,4.65725755210022,0,2.17144469965024,3.82215575590973,0,6.67421588583652,0,0,0,0,0,122.584278854143,0,0.118920090777569,0,0,39.7032278580351,0.231522474323834,0.437119121007915,139.684237019372,0,75.6521716196219,0.196308467114945,0,0.8453114551668,0,0.281951753939561,0.709036767709349,0,0,0,0,0.730336388246517,0,0,25.5589930752959,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0.201273793591026,0 | ||
|short_description=p1@ENST00000476204 | |||
}} | }} |
Latest revision as of 18:09, 25 July 2015
Short description: | p1@ENST00000476204 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000476204_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | 0bp_to_ENST00000476204_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.12e-19 | 10 |
nephron tubule epithelial cell | 1.12e-19 | 10 |
epithelial cell of nephron | 1.21e-17 | 15 |
kidney cell | 3.27e-15 | 17 |
kidney epithelial cell | 3.27e-15 | 17 |
kidney cortical cell | 2.44e-12 | 12 |
renal cortical epithelial cell | 2.44e-12 | 12 |
pericyte cell | 1.18e-08 | 4 |
enteric smooth muscle cell | 5.84e-08 | 3 |
smooth muscle cell of large intestine | 5.84e-08 | 3 |
smooth muscle cell of colon | 5.84e-08 | 3 |
brush border epithelial cell | 2.95e-07 | 3 |
kidney cortex tubule cell | 2.95e-07 | 3 |
epithelial cell of proximal tubule | 2.95e-07 | 3 |