CL:1000279
From FANTOM5_SSTAR
| Name: | smooth muscle cell of large intestine | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A smooth muscle cell that is part of the large intestine." [GOC:tfm] | ||
| Xrefs: |
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| Synonyms: | "non-striated muscle fiber of large intestine" EXACT [FMA:15653] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002504(enteric smooth muscle cell) |
|---|---|
| part_of: | UBERON:0000059(large intestine) |
Children
| is a: | CL:1000280 (smooth muscle cell of colon) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11239-116D6 (Smooth Muscle Cells - Colonic, donor1)
- 11320-117D6 (Smooth Muscle Cells - Colonic, donor2)
- 11396-118D1 (Smooth Muscle Cells - Colonic, donor3)
Mouse (Mus musculus)
- 11239-116D6 (Smooth Muscle Cells - Colonic, donor1)
- 11320-117D6 (Smooth Muscle Cells - Colonic, donor2)
- 11396-118D1 (Smooth Muscle Cells - Colonic, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000279 (smooth muscle cell of large intestine), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
