FFCP PHASE1:Hg19::chr17:46667774..46667790,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000476204_5end | |association_with_transcript=0bp_to_ENST00000476204_5end | ||
|cluster_id=chr17:46667774..46667790,+ | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_1_at_ENST00000476204_5end | |description=CAGE_peak_1_at_ENST00000476204_5end | ||
|id=chr17:46667774..46667790,+ | |id=chr17:46667774..46667790,+ | ||
|ontology_enrichment_celltype=CL:1000449!3.24e-16!16;CL:1000507!4.80e-15!12;CL:1000494!4.80e-15!12;CL:1000497!7.02e-14!18;CL:0002518!7.02e-14!18;CL:0002681!1.31e-12!13;CL:0002584!1.31e-12!13;CL:0000669!9.46e-07!5 | |ontology_enrichment_celltype=CL:1000449!3.24e-16!16;CL:1000507!4.80e-15!12;CL:1000494!4.80e-15!12;CL:1000497!7.02e-14!18;CL:0002518!7.02e-14!18;CL:0002681!1.31e-12!13;CL:0002584!1.31e-12!13;CL:0000669!9.46e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.07e-19;10!CL:1000494;1.07e-19;10!CL:1000449;1.20e-17;15!CL:1000497;3.26e-15;17!CL:0002518;3.26e-15;17!CL:0002681;2.48e-12;12!CL:0002584;2.48e-12;12!CL:0000669;1.15e-08;4!CL:0002504;5.76e-08;3!CL:1000279;5.76e-08;3!CL:1000280;5.76e-08;3!CL:0000239;2.79e-07;3!CL:1000615;2.79e-07;3!CL:0002306;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.12e-19,10;CL:1000494,1.12e-19,10;CL:1000449,1.21e-17,15;CL:1000497,3.27e-15,17;CL:0002518,3.27e-15,17;CL:0002681,2.44e-12,12;CL:0002584,2.44e-12,12;CL:0000669,1.18e-08,4;CL:0002504,5.84e-08,3;CL:1000279,5.84e-08,3;CL:1000280,5.84e-08,3;CL:0000239,2.95e-07,3;CL:1000615,2.95e-07,3;CL:0002306,2.95e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!8.80e-20!32;UBERON:0002113!1.25e-19!27;UBERON:0003918!1.25e-19!27;UBERON:0005095!1.25e-19!27;UBERON:0007687!1.25e-19!27;UBERON:0003887!9.01e-19!21;UBERON:0000080!1.30e-18!18;UBERON:0002120!1.30e-18!18;UBERON:0004875!1.30e-18!18;UBERON:0005721!1.30e-18!18;UBERON:0005754!1.30e-18!18;UBERON:0007297!1.30e-18!18;UBERON:0006555!1.65e-17!17;UBERON:0005103!1.65e-17!17;UBERON:0000083!1.65e-17!17;UBERON:0009201!1.65e-17!17;UBERON:0004819!1.65e-17!17;UBERON:0006553!1.65e-17!17;UBERON:0003074!1.65e-17!17;UBERON:0003060!1.65e-17!17;UBERON:0002417!2.17e-16!61;UBERON:0000916!2.17e-16!61;UBERON:0004211!3.24e-16!16;UBERON:0001285!3.24e-16!16;UBERON:0007684!3.24e-16!16;UBERON:0003220!3.24e-16!16;UBERON:0004208!3.24e-16!16;UBERON:0004876!3.50e-16!20;UBERON:0009773!4.80e-15!12;UBERON:0001231!4.80e-15!12;UBERON:0004810!4.80e-15!12;UBERON:0009569!4.86e-15!113;UBERON:0000058!1.28e-14!26;UBERON:0006554!1.54e-14!44;UBERON:0001008!5.03e-14!45;UBERON:0005177!1.15e-13!107;UBERON:0000464!1.15e-13!104;UBERON:0003886!8.05e-13!63;UBERON:0001225!1.31e-12!13;UBERON:0008987!1.31e-12!13;UBERON:0005172!3.66e-12!55;UBERON:0005173!3.66e-12!55;UBERON:0002100!1.09e-11!216;UBERON:0000466!1.13e-11!126;UBERON:0000059!1.39e-11!11;UBERON:0003064!3.60e-11!37;UBERON:0002553!1.41e-10!70;UBERON:0003104!4.42e-10!238;UBERON:0009142!4.42e-10!238;UBERON:0005409!7.80e-10!35;UBERON:0001851!1.33e-09!16;UBERON:0001155!4.19e-09!9;UBERON:0000353!7.65e-09!17;UBERON:0000160!5.37e-08!27;UBERON:0003103!3.49e-07!69;UBERON:0003688!3.93e-07!6;UBERON:0002358!3.93e-07!6;UBERON:0003684!3.93e-07!6;UBERON:0001178!3.93e-07!6;UBERON:0005256!5.77e-07!143;UBERON:0004457!7.02e-07!12;UBERON:0000042!7.02e-07!12 | |ontology_enrichment_uberon=UBERON:0000489!8.80e-20!32;UBERON:0002113!1.25e-19!27;UBERON:0003918!1.25e-19!27;UBERON:0005095!1.25e-19!27;UBERON:0007687!1.25e-19!27;UBERON:0003887!9.01e-19!21;UBERON:0000080!1.30e-18!18;UBERON:0002120!1.30e-18!18;UBERON:0004875!1.30e-18!18;UBERON:0005721!1.30e-18!18;UBERON:0005754!1.30e-18!18;UBERON:0007297!1.30e-18!18;UBERON:0006555!1.65e-17!17;UBERON:0005103!1.65e-17!17;UBERON:0000083!1.65e-17!17;UBERON:0009201!1.65e-17!17;UBERON:0004819!1.65e-17!17;UBERON:0006553!1.65e-17!17;UBERON:0003074!1.65e-17!17;UBERON:0003060!1.65e-17!17;UBERON:0002417!2.17e-16!61;UBERON:0000916!2.17e-16!61;UBERON:0004211!3.24e-16!16;UBERON:0001285!3.24e-16!16;UBERON:0007684!3.24e-16!16;UBERON:0003220!3.24e-16!16;UBERON:0004208!3.24e-16!16;UBERON:0004876!3.50e-16!20;UBERON:0009773!4.80e-15!12;UBERON:0001231!4.80e-15!12;UBERON:0004810!4.80e-15!12;UBERON:0009569!4.86e-15!113;UBERON:0000058!1.28e-14!26;UBERON:0006554!1.54e-14!44;UBERON:0001008!5.03e-14!45;UBERON:0005177!1.15e-13!107;UBERON:0000464!1.15e-13!104;UBERON:0003886!8.05e-13!63;UBERON:0001225!1.31e-12!13;UBERON:0008987!1.31e-12!13;UBERON:0005172!3.66e-12!55;UBERON:0005173!3.66e-12!55;UBERON:0002100!1.09e-11!216;UBERON:0000466!1.13e-11!126;UBERON:0000059!1.39e-11!11;UBERON:0003064!3.60e-11!37;UBERON:0002553!1.41e-10!70;UBERON:0003104!4.42e-10!238;UBERON:0009142!4.42e-10!238;UBERON:0005409!7.80e-10!35;UBERON:0001851!1.33e-09!16;UBERON:0001155!4.19e-09!9;UBERON:0000353!7.65e-09!17;UBERON:0000160!5.37e-08!27;UBERON:0003103!3.49e-07!69;UBERON:0003688!3.93e-07!6;UBERON:0002358!3.93e-07!6;UBERON:0003684!3.93e-07!6;UBERON:0001178!3.93e-07!6;UBERON:0005256!5.77e-07!143;UBERON:0004457!7.02e-07!12;UBERON:0000042!7.02e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.07e-19;10!UBERON:0009773;1.07e-19;10!UBERON:0001231;1.07e-19;10!UBERON:0004810;1.07e-19;10!UBERON:0002113;6.94e-19;24!UBERON:0011143;6.94e-19;24!UBERON:0006555;1.20e-17;15!UBERON:0004819;1.20e-17;15!UBERON:0001285;1.20e-17;15!UBERON:0007684;1.20e-17;15!UBERON:0000059;6.38e-15;11!UBERON:0000489;7.23e-15;29!UBERON:0006554;3.16e-14;30!UBERON:0001008;3.16e-14;30!UBERON:0001225;2.48e-12;12!UBERON:0008987;2.48e-12;12!UBERON:0000160;3.12e-12;17!UBERON:0001155;3.63e-11;9!UBERON:0005409;7.57e-11;22!UBERON:0001851;1.70e-09;15!UBERON:0000353;1.70e-09;15!UBERON:0006947;2.73e-07;3!UBERON:0004054;2.73e-07;3!UBERON:0006853;2.79e-07;3!UBERON:0007685;2.79e-07;3!UBERON:0004134;2.79e-07;3!UBERON:0005172;3.00e-07;52!UBERON:0005173;3.00e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.68e-22,26;UBERON:0003918,3.68e-22,26;UBERON:0011143,3.68e-22,26;UBERON:0005095,3.68e-22,26;UBERON:0007687,3.68e-22,26;UBERON:0004810,1.12e-19,10;UBERON:0006555,1.45e-19,16;UBERON:0004819,1.45e-19,16;UBERON:0000489,9.43e-18,31;UBERON:0004211,1.21e-17,15;UBERON:0009773,1.21e-17,15;UBERON:0001231,1.21e-17,15;UBERON:0001285,1.21e-17,15;UBERON:0007684,1.21e-17,15;UBERON:0004208,1.21e-17,15;UBERON:0000059,6.30e-15,11;UBERON:0002417,1.88e-13,60;UBERON:0000916,1.88e-13,60;UBERON:0006554,1.24e-12,47;UBERON:0003104,1.64e-12,160;UBERON:0009142,1.64e-12,160;UBERON:0001225,2.44e-12,12;UBERON:0008987,2.44e-12,12;UBERON:0009569,2.83e-12,112;UBERON:0001008,2.95e-12,48;UBERON:0000160,3.46e-12,17;UBERON:0001155,3.55e-11,9;UBERON:0005172,1.89e-10,54;UBERON:0005173,1.89e-10,54;UBERON:0005177,6.71e-10,101;UBERON:0001851,1.68e-09,15;UBERON:0000353,1.68e-09,15;UBERON:0005409,3.10e-09,25;UBERON:0002100,1.27e-08,199;UBERON:0000080,5.93e-08,9;UBERON:0002120,5.93e-08,9;UBERON:0004875,5.93e-08,9;UBERON:0005721,5.93e-08,9;UBERON:0005754,5.93e-08,9;UBERON:0007297,5.93e-08,9;UBERON:0006947,2.77e-07,3;UBERON:0004054,2.77e-07,3;UBERON:0006853,2.95e-07,3;UBERON:0007685,2.95e-07,3;UBERON:0004134,2.95e-07,3;UBERON:0003103,3.05e-07,68 | |||
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|short_description=p1@ENST00000476204 | |short_description=p1@ENST00000476204 | ||
}} | }} |
Latest revision as of 18:09, 25 July 2015
Short description: | p1@ENST00000476204 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000476204_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | 0bp_to_ENST00000476204_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.12e-19 | 10 |
nephron tubule epithelial cell | 1.12e-19 | 10 |
epithelial cell of nephron | 1.21e-17 | 15 |
kidney cell | 3.27e-15 | 17 |
kidney epithelial cell | 3.27e-15 | 17 |
kidney cortical cell | 2.44e-12 | 12 |
renal cortical epithelial cell | 2.44e-12 | 12 |
pericyte cell | 1.18e-08 | 4 |
enteric smooth muscle cell | 5.84e-08 | 3 |
smooth muscle cell of large intestine | 5.84e-08 | 3 |
smooth muscle cell of colon | 5.84e-08 | 3 |
brush border epithelial cell | 2.95e-07 | 3 |
kidney cortex tubule cell | 2.95e-07 | 3 |
epithelial cell of proximal tubule | 2.95e-07 | 3 |