FFCP PHASE1:Hg19::chr17:46667561..46667572,-: Difference between revisions
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|ontology_enrichment_celltype=CL:1000507!1.03e-17!12;CL:1000494!1.03e-17!12;CL:1000449!1.57e-12!16;CL:1000497!8.21e-11!18;CL:0002518!8.21e-11!18;CL:0002681!3.69e-08!13;CL:0002584!3.69e-08!13 | |ontology_enrichment_celltype=CL:1000507!1.03e-17!12;CL:1000494!1.03e-17!12;CL:1000449!1.57e-12!16;CL:1000497!8.21e-11!18;CL:0002518!8.21e-11!18;CL:0002681!3.69e-08!13;CL:0002584!3.69e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.45e-31;10!CL:1000494;3.45e-31;10!CL:1000449;3.08e-20;15!CL:1000497;1.17e-17;17!CL:0002518;1.17e-17;17!CL:0000239;1.28e-12;3!CL:1000615;1.28e-12;3!CL:0002306;1.28e-12;3!CL:0002504;5.07e-12;3!CL:1000279;5.07e-12;3!CL:1000280;5.07e-12;3!CL:0002681;2.23e-11;12!CL:0002584;2.23e-11;12!CL:0000650;4.65e-09;2!CL:1000500;4.65e-09;2!CL:1000618;4.65e-09;2!CL:1001318;4.65e-09;2!CL:0002173;4.65e-09;2!CL:0002554;7.08e-09;2!CL:0002598;1.42e-08;2 | |ontology_enrichment_celltype_v019=CL:1000507;3.45e-31;10!CL:1000494;3.45e-31;10!CL:1000449;3.08e-20;15!CL:1000497;1.17e-17;17!CL:0002518;1.17e-17;17!CL:0000239;1.28e-12;3!CL:1000615;1.28e-12;3!CL:0002306;1.28e-12;3!CL:0002504;5.07e-12;3!CL:1000279;5.07e-12;3!CL:1000280;5.07e-12;3!CL:0002681;2.23e-11;12!CL:0002584;2.23e-11;12!CL:0000650;4.65e-09;2!CL:1000500;4.65e-09;2!CL:1000618;4.65e-09;2!CL:1001318;4.65e-09;2!CL:0002173;4.65e-09;2!CL:0002554;7.08e-09;2!CL:0002598;1.42e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.16e-31,10;CL:1000494,5.16e-31,10;CL:1000449,4.00e-20,15;CL:1000497,1.46e-17,17;CL:0002518,1.46e-17,17;CL:0000239,1.23e-12,3;CL:1000615,1.23e-12,3;CL:0002306,1.23e-12,3;CL:0002504,5.29e-12,3;CL:1000279,5.29e-12,3;CL:1000280,5.29e-12,3;CL:0002681,2.46e-11,12;CL:0002584,2.46e-11,12;CL:0002554,6.43e-09,2;CL:0000650,7.85e-09,2;CL:1000500,7.85e-09,2;CL:1000618,7.85e-09,2;CL:1001318,7.85e-09,2;CL:0002173,7.85e-09,2;CL:0002598,9.95e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.08e-09;2 | |ontology_enrichment_development_v019=UBERON:0007297;7.08e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!3.43e-20!32;UBERON:0002113!1.47e-18!27;UBERON:0003918!1.47e-18!27;UBERON:0005095!1.47e-18!27;UBERON:0007687!1.47e-18!27;UBERON:0009773!1.03e-17!12;UBERON:0001231!1.03e-17!12;UBERON:0004810!1.03e-17!12;UBERON:0000080!1.78e-15!18;UBERON:0002120!1.78e-15!18;UBERON:0004875!1.78e-15!18;UBERON:0005721!1.78e-15!18;UBERON:0005754!1.78e-15!18;UBERON:0007297!1.78e-15!18;UBERON:0003887!9.36e-15!21;UBERON:0006555!4.67e-14!17;UBERON:0005103!4.67e-14!17;UBERON:0000083!4.67e-14!17;UBERON:0009201!4.67e-14!17;UBERON:0004819!4.67e-14!17;UBERON:0006553!4.67e-14!17;UBERON:0003074!4.67e-14!17;UBERON:0003060!4.67e-14!17;UBERON:0004876!1.49e-13!20;UBERON:0000058!2.85e-13!26;UBERON:0006554!5.41e-13!44;UBERON:0000059!1.05e-12!11;UBERON:0001008!1.44e-12!45;UBERON:0004211!1.57e-12!16;UBERON:0001285!1.57e-12!16;UBERON:0007684!1.57e-12!16;UBERON:0003220!1.57e-12!16;UBERON:0004208!1.57e-12!16;UBERON:0002417!5.83e-12!61;UBERON:0000916!5.83e-12!61;UBERON:0005172!1.79e-10!55;UBERON:0005173!1.79e-10!55;UBERON:0005177!4.76e-10!107;UBERON:0009569!7.09e-10!113;UBERON:0001155!2.10e-09!9;UBERON:0003064!7.49e-09!37;UBERON:0005409!1.26e-08!35;UBERON:0001225!3.69e-08!13;UBERON:0008987!3.69e-08!13;UBERON:0000464!7.22e-08!104;UBERON:0000160!7.73e-08!27;UBERON:0003886!9.47e-08!63;UBERON:0003103!5.16e-07!69 | |ontology_enrichment_uberon=UBERON:0000489!3.43e-20!32;UBERON:0002113!1.47e-18!27;UBERON:0003918!1.47e-18!27;UBERON:0005095!1.47e-18!27;UBERON:0007687!1.47e-18!27;UBERON:0009773!1.03e-17!12;UBERON:0001231!1.03e-17!12;UBERON:0004810!1.03e-17!12;UBERON:0000080!1.78e-15!18;UBERON:0002120!1.78e-15!18;UBERON:0004875!1.78e-15!18;UBERON:0005721!1.78e-15!18;UBERON:0005754!1.78e-15!18;UBERON:0007297!1.78e-15!18;UBERON:0003887!9.36e-15!21;UBERON:0006555!4.67e-14!17;UBERON:0005103!4.67e-14!17;UBERON:0000083!4.67e-14!17;UBERON:0009201!4.67e-14!17;UBERON:0004819!4.67e-14!17;UBERON:0006553!4.67e-14!17;UBERON:0003074!4.67e-14!17;UBERON:0003060!4.67e-14!17;UBERON:0004876!1.49e-13!20;UBERON:0000058!2.85e-13!26;UBERON:0006554!5.41e-13!44;UBERON:0000059!1.05e-12!11;UBERON:0001008!1.44e-12!45;UBERON:0004211!1.57e-12!16;UBERON:0001285!1.57e-12!16;UBERON:0007684!1.57e-12!16;UBERON:0003220!1.57e-12!16;UBERON:0004208!1.57e-12!16;UBERON:0002417!5.83e-12!61;UBERON:0000916!5.83e-12!61;UBERON:0005172!1.79e-10!55;UBERON:0005173!1.79e-10!55;UBERON:0005177!4.76e-10!107;UBERON:0009569!7.09e-10!113;UBERON:0001155!2.10e-09!9;UBERON:0003064!7.49e-09!37;UBERON:0005409!1.26e-08!35;UBERON:0001225!3.69e-08!13;UBERON:0008987!3.69e-08!13;UBERON:0000464!7.22e-08!104;UBERON:0000160!7.73e-08!27;UBERON:0003886!9.47e-08!63;UBERON:0003103!5.16e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.45e-31;10!UBERON:0009773;3.45e-31;10!UBERON:0001231;3.45e-31;10!UBERON:0004810;3.45e-31;10!UBERON:0002113;8.72e-22;24!UBERON:0011143;8.72e-22;24!UBERON:0000059;1.85e-21;11!UBERON:0006555;3.08e-20;15!UBERON:0004819;3.08e-20;15!UBERON:0001285;3.08e-20;15!UBERON:0007684;3.08e-20;15!UBERON:0000489;1.43e-17;29!UBERON:0006554;6.74e-17;30!UBERON:0001008;6.74e-17;30!UBERON:0001155;1.10e-14;9!UBERON:0006853;1.28e-12;3!UBERON:0007685;1.28e-12;3!UBERON:0004134;1.28e-12;3!UBERON:0006947;1.28e-12;3!UBERON:0004054;1.28e-12;3!UBERON:0000160;1.29e-12;17!UBERON:0005409;4.23e-12;22!UBERON:0001225;2.23e-11;12!UBERON:0008987;2.23e-11;12!UBERON:0005904;1.41e-09;4!UBERON:0003567;4.65e-09;2!UBERON:0003838;4.65e-09;2!UBERON:0003586;4.65e-09;2!UBERON:0005169;4.65e-09;2!UBERON:0002321;4.65e-09;2!UBERON:0005215;4.65e-09;2!UBERON:0002303;4.65e-09;2!UBERON:0002319;4.65e-09;2!UBERON:0001851;5.65e-09;15!UBERON:0000353;5.65e-09;15!UBERON:0005172;1.03e-07;52!UBERON:0005173;1.03e-07;52!UBERON:0004921;1.97e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0004211;3.45e-31;10!UBERON:0009773;3.45e-31;10!UBERON:0001231;3.45e-31;10!UBERON:0004810;3.45e-31;10!UBERON:0002113;8.72e-22;24!UBERON:0011143;8.72e-22;24!UBERON:0000059;1.85e-21;11!UBERON:0006555;3.08e-20;15!UBERON:0004819;3.08e-20;15!UBERON:0001285;3.08e-20;15!UBERON:0007684;3.08e-20;15!UBERON:0000489;1.43e-17;29!UBERON:0006554;6.74e-17;30!UBERON:0001008;6.74e-17;30!UBERON:0001155;1.10e-14;9!UBERON:0006853;1.28e-12;3!UBERON:0007685;1.28e-12;3!UBERON:0004134;1.28e-12;3!UBERON:0006947;1.28e-12;3!UBERON:0004054;1.28e-12;3!UBERON:0000160;1.29e-12;17!UBERON:0005409;4.23e-12;22!UBERON:0001225;2.23e-11;12!UBERON:0008987;2.23e-11;12!UBERON:0005904;1.41e-09;4!UBERON:0003567;4.65e-09;2!UBERON:0003838;4.65e-09;2!UBERON:0003586;4.65e-09;2!UBERON:0005169;4.65e-09;2!UBERON:0002321;4.65e-09;2!UBERON:0005215;4.65e-09;2!UBERON:0002303;4.65e-09;2!UBERON:0002319;4.65e-09;2!UBERON:0001851;5.65e-09;15!UBERON:0000353;5.65e-09;15!UBERON:0005172;1.03e-07;52!UBERON:0005173;1.03e-07;52!UBERON:0004921;1.97e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.16e-31,10;UBERON:0002113,2.92e-27,26;UBERON:0003918,2.92e-27,26;UBERON:0011143,2.92e-27,26;UBERON:0005095,2.92e-27,26;UBERON:0007687,2.92e-27,26;UBERON:0006555,2.82e-23,16;UBERON:0004819,2.82e-23,16;UBERON:0000489,2.47e-22,31;UBERON:0000059,1.09e-21,11;UBERON:0004211,4.00e-20,15;UBERON:0009773,4.00e-20,15;UBERON:0001231,4.00e-20,15;UBERON:0001285,4.00e-20,15;UBERON:0007684,4.00e-20,15;UBERON:0004208,4.00e-20,15;UBERON:0001155,6.86e-15,9;UBERON:0006554,1.24e-13,47;UBERON:0002417,2.46e-13,60;UBERON:0000916,2.46e-13,60;UBERON:0005172,2.55e-13,54;UBERON:0005173,2.55e-13,54;UBERON:0001008,2.78e-13,48;UBERON:0000160,9.44e-13,17;UBERON:0006947,1.18e-12,3;UBERON:0004054,1.18e-12,3;UBERON:0006853,1.23e-12,3;UBERON:0007685,1.23e-12,3;UBERON:0004134,1.23e-12,3;UBERON:0001225,2.46e-11,12;UBERON:0008987,2.46e-11,12;UBERON:0005177,3.87e-11,101;UBERON:0009569,9.95e-11,112;UBERON:0005409,1.29e-10,25;UBERON:0005904,1.33e-09,4;UBERON:0003104,2.02e-09,160;UBERON:0009142,2.02e-09,160;UBERON:0001851,6.09e-09,15;UBERON:0000353,6.09e-09,15;UBERON:0003567,7.85e-09,2;UBERON:0003838,7.85e-09,2;UBERON:0003586,7.85e-09,2;UBERON:0005169,7.85e-09,2;UBERON:0002321,7.85e-09,2;UBERON:0005215,7.85e-09,2;UBERON:0002303,7.85e-09,2;UBERON:0002319,7.85e-09,2;UBERON:0003103,1.80e-08,68;UBERON:0000080,3.77e-07,9;UBERON:0002120,3.77e-07,9;UBERON:0004875,3.77e-07,9;UBERON:0005721,3.77e-07,9;UBERON:0005754,3.77e-07,9;UBERON:0007297,3.77e-07,9;UBERON:0000058,5.72e-07,19 | |||
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| ||
|short_description=p4@HOXB3 | |short_description=p4@HOXB3 | ||
}} | }} |
Revision as of 23:42, 18 November 2012
Short description: | p4@HOXB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_HOXB3_5end |
Coexpression cluster: | C2414_kidney_smallcell_seminal_somatostatinoma_ductus_small_Fibroblast |
Association with transcript: | 24bp_to_ENST00000476342_5end |
EntrezGene: | HOXB3 |
HGNC: | 5114 |
UniProt: | P14651 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.16e-31 | 10 |
nephron tubule epithelial cell | 5.16e-31 | 10 |
epithelial cell of nephron | 4.00e-20 | 15 |
kidney cell | 1.46e-17 | 17 |
kidney epithelial cell | 1.46e-17 | 17 |
brush border epithelial cell | 1.23e-12 | 3 |
kidney cortex tubule cell | 1.23e-12 | 3 |
epithelial cell of proximal tubule | 1.23e-12 | 3 |
enteric smooth muscle cell | 5.29e-12 | 3 |
smooth muscle cell of large intestine | 5.29e-12 | 3 |
smooth muscle cell of colon | 5.29e-12 | 3 |
kidney cortical cell | 2.46e-11 | 12 |
renal cortical epithelial cell | 2.46e-11 | 12 |
fibroblast of lymphatic vessel | 6.43e-09 | 2 |
mesangial cell | 7.85e-09 | 2 |
kidney interstitial cell | 7.85e-09 | 2 |
juxtaglomerular complex cell | 7.85e-09 | 2 |
renal interstitial pericyte | 7.85e-09 | 2 |
extraglomerular mesangial cell | 7.85e-09 | 2 |
bronchial smooth muscle cell | 9.95e-09 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.