FFCP PHASE1:Hg19::chr17:27970385..27970397,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:27970385..27970397,-
|short_description=p@chr17:27970385..27970397,-
|description=CAGE_peak_at_chr17:27970385..27970397,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:27970385..27970397,- | |||
|description=CAGE_peak_at_chr17:27970385..27970397,- | |||
|id=chr17:27970385..27970397,- | |||
|ontology_enrichment_celltype=CL:0002078!2.98e-11!44;CL:0000115!3.63e-11!35;CL:1000497!8.48e-11!18;CL:0002518!8.48e-11!18;CL:0002139!1.71e-10!24;CL:0005020!2.75e-10!6;CL:0002138!2.75e-10!6;CL:0005022!2.75e-10!6;CL:1000449!8.03e-10!16;CL:0002681!8.60e-10!13;CL:0002584!8.60e-10!13;CL:0000066!2.98e-09!254;CL:1000507!1.04e-07!12;CL:1000494!1.04e-07!12;CL:0000213!1.32e-07!57;CL:0000215!1.32e-07!57 | |||
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|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;9.57e-17;1!DOID:3493;3.43e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,8.86e-17,1;DOID:3493,3.43e-09,2 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001225,1.23e-31,12;UBERON:0008987,1.23e-31,12;UBERON:0001851,2.38e-25,15;UBERON:0004211,2.38e-25,15;UBERON:0009773,2.38e-25,15;UBERON:0000353,2.38e-25,15;UBERON:0001231,2.38e-25,15;UBERON:0001285,2.38e-25,15;UBERON:0007684,2.38e-25,15;UBERON:0004208,2.38e-25,15;UBERON:0006555,8.90e-24,16;UBERON:0004819,8.90e-24,16;UBERON:0006853,1.59e-21,3;UBERON:0007685,1.59e-21,3;UBERON:0004134,1.59e-21,3;UBERON:0002113,1.13e-14,26;UBERON:0003918,1.13e-14,26;UBERON:0011143,1.13e-14,26;UBERON:0005095,1.13e-14,26;UBERON:0007687,1.13e-14,26;UBERON:0004810,2.13e-14,10;UBERON:0000489,2.57e-12,31;UBERON:0010532,1.29e-09,7;UBERON:0000074,1.29e-09,7;UBERON:0001229,1.29e-09,7;UBERON:0001230,1.29e-09,7;UBERON:0003220,1.29e-09,7;UBERON:0005749,1.29e-09,7;UBERON:0004199,1.29e-09,7;UBERON:0004209,1.29e-09,7;UBERON:0004198,1.29e-09,7;UBERON:0005103,1.59e-08,8;UBERON:0000083,1.59e-08,8;UBERON:0009201,1.59e-08,8;UBERON:0006553,1.59e-08,8;UBERON:0003074,1.59e-08,8;UBERON:0003060,1.59e-08,8;UBERON:0006554,4.02e-08,47;UBERON:0001008,5.95e-08,48;UBERON:0000080,1.13e-07,9;UBERON:0002120,1.13e-07,9;UBERON:0004875,1.13e-07,9;UBERON:0005721,1.13e-07,9;UBERON:0005754,1.13e-07,9;UBERON:0007297,1.13e-07,9;UBERON:0005172,4.61e-07,54;UBERON:0005173,4.61e-07,54 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,1.62273696827342,0.348259474598534,1.19662164466979,0,0,0,0.596287222100115,0,0,0,0,0.550236083880135,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0,0.267899184852239,0,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0.936017060556951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,1.23224539367064,0,0,0.211103257785751,2.27466768141793,1.02056223165909,0,0,0,0,2.03901018436031,4.15538004464362,0,0,0.261435451024901,1.53870075069834,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99424864653152,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.392125068635479,0.335643173951685,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0.0787831823072236,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0.612691153526923,0.327872630709804,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0,2.70350199629091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,7.80274719886524,0,6.05710560451857,0,0,0,0,0,0,0.329821550236287,0.301925687133347,1.62065732026684,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0,0.653150243690884,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:27970385..27970397,- | |||
}} | }} |
Latest revision as of 15:13, 25 July 2015
Short description: | p@chr17:27970385..27970397, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:27970385..27970397, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cortical cell | 1.23e-31 | 12 |
renal cortical epithelial cell | 1.23e-31 | 12 |
epithelial cell of nephron | 2.38e-25 | 15 |
kidney cell | 2.18e-22 | 17 |
kidney epithelial cell | 2.18e-22 | 17 |
brush border epithelial cell | 1.59e-21 | 3 |
kidney cortex tubule cell | 1.59e-21 | 3 |
epithelial cell of proximal tubule | 1.59e-21 | 3 |
mucus secreting cell | 8.86e-17 | 1 |
kidney tubule cell | 2.13e-14 | 10 |
nephron tubule epithelial cell | 2.13e-14 | 10 |
glomerular endothelial cell | 4.39e-13 | 5 |
immature conventional dendritic cell | 4.84e-11 | 5 |
common dendritic progenitor | 4.84e-11 | 5 |
glomerular cell | 1.29e-09 | 7 |
kidney corpuscule cell | 1.29e-09 | 7 |
seromucus secreting cell | 4.70e-09 | 2 |
conventional dendritic cell | 1.17e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 8.86e-17 | 1 |
signet ring cell adenocarcinoma | 3.43e-09 | 2 |