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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000058,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000080,UBERON:0000083,UBERON:0000119,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000489,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001008,UBERON:0001062,UBERON:0001225,UBERON:0001231,UBERON:0001285,UBERON:0001851,UBERON:0002050,UBERON:0002100,UBERON:0002113,UBERON:0002120,UBERON:0002417,UBERON:0002532,UBERON:0002553,UBERON:0003060,UBERON:0003064,UBERON:0003074,UBERON:0003081,UBERON:0003103,UBERON:0003104,UBERON:0003220,UBERON:0003886,UBERON:0003887,UBERON:0003914,UBERON:0003918,UBERON:0004111,UBERON:0004120,UBERON:0004211,UBERON:0004810,UBERON:0004819,UBERON:0004875,UBERON:0004876,UBERON:0005095,UBERON:0005103,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005256,UBERON:0005291,UBERON:0005423,UBERON:0005721,UBERON:0005754,UBERON:0006553,UBERON:0006554,UBERON:0006555,UBERON:0007684,UBERON:0007687,UBERON:0009142,UBERON:0009201
|DRA_sample_Accession=CAGE@SAMD00005247
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000144,CL:0000255,CL:0000548,CL:0002371,CL:0002518,CL:0002584,CL:1000494,CL:1000497,CL:1000507
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005247
|accession_numbers=CAGE;DRX008425;DRR009297;DRZ000722;DRZ002107;DRZ012072;DRZ013457
|accession_numbers_RNASeq=sRNA-Seq;DRX036996;DRR041362;DRZ007004
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002113,UBERON:0002100,UBERON:0000483,UBERON:0001851,UBERON:0000479,UBERON:0000064,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0006555,UBERON:0006554,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003103,UBERON:0009569,UBERON:0004211,UBERON:0009773,UBERON:0000489,UBERON:0000353,UBERON:0005177,UBERON:0005172,UBERON:0001231,UBERON:0004819,UBERON:0005173,UBERON:0004810,UBERON:0001285,UBERON:0001225,UBERON:0011143,UBERON:0001008,UBERON:0002417,UBERON:0008987,UBERON:0007684,UBERON:0000916
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000255,CL:1000497,CL:0002518,CL:0002681,CL:1000449,CL:1000507,CL:0002584,CL:1000494
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000151,FF:0000152
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!2.10!125.43!PAX8;;chr1:201979743..201979762,+!p1@ELF3!2.08!120.02!ELF3;;chr1:201979703..201979721,+!p2@ELF3!2.03!105.58!ELF3;;chr17:46703687..46703740,-!p1@HOXB9!2.00!99.72!HOXB9;;chr17:36105042..36105060,-!p1@HNF1B!1.84!68.13!HNF1B;;chr1:209979467..209979494,-!p1@IRF6!1.83!74.00!IRF6;;chr17:46682321..46682362,-!p1@HOXB6!1.67!46.02!HOXB6;;chr12:66218255..66218304,+!p3@HMGA2!1.47!74.45!HMGA2;;chr6:10415276..10415341,-!p2@TFAP2A!1.47!34.74!TFAP2A;;chr6:34204921..34204939,+!p3@HMGA1!1.39!674.09!HMGA1;;chr17:35294075..35294102,+!p1@ENST00000559335!1.38!23.01!LHX1;;chr10:8096631..8096660,+!p1@GATA3!1.29!22.11!GATA3;;chr11:34642612..34642646,+!p1@EHF!1.28!18.05!EHF;;chr17:46622205..46622218,-!p3@HOXB2!1.27!20.30!HOXB2;;chr1:209979411..209979433,-!p2@IRF6!1.25!16.69!IRF6;;chr10:8096772..8096787,+!p2@GATA3!1.21!18.05!GATA3;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.21!15.34!POU3F3;;chr2:176994408..176994492,+!p1@HOXD8!1.19!14.44!HOXD8;;chr6:34204672..34204692,+!p1@HMGA1!1.18!1564.31!HMGA1;;chr6:10415484..10415508,-!p3@TFAP2A!1.18!13.99!TFAP2A;;chr7:27205136..27205164,-!p1@HOXA9!1.18!13.99!HOXA9;;chr16:86600426..86600441,+!p1@FOXC2!1.15!32.49!FOXC2;;chr12:66218598..66218645,+!p2@HMGA2!1.12!56.40!HMGA2;;chr21:38071430..38071456,+!p1@SIM2!1.12!12.18!SIM2;;chr7:27205106..27205134,-!p2@HOXA9!1.12!12.18!HOXA9;;chr12:66218212..66218244,+!p5@HMGA2!1.11!17.15!HMGA2;;chr17:46622440..46622477,-!p5@HOXB2!1.10!13.08!HOXB2;;chr10:102505493..102505546,+!p2@PAX2!1.10!11.73!PAX2;;chr7:27224795..27224840,-!p2@HOXA11!1.09!11.28!HOXA11;;chr1:6479968..6479986,-!p1@HES2!1.09!11.28!HES2;;chr12:66218003..66218018,+!p9@HMGA2!1.08!13.54!HMGA2;;chr17:46675558..46675577,-!p2@HOXB6!1.07!10.83!HOXB6;;chr6:1312325..1312340,+!p1@FOXQ1!1.06!17.15!FOXQ1;;chr5:2751762..2751784,-!p1@IRX2!1.06!10.38!IRX2;;chr17:41623692..41623715,-!p1@ETV4!1.04!42.86!ETV4;;chr11:65554528..65554546,+!p1@OVOL1!1.04!9.93!OVOL1;;chr2:5832508..5832524,+!p1@SOX11!1.04!9.93!SOX11;;chr2:46524897..46524911,+!p2@EPAS1!1.02!26.62!EPAS1;;chr17:46622229..46622257,-!p6@HOXB2!1.01!10.83!HOXB2;;chr17:46132044..46132080,+!p4@NFE2L1!1.00!9.02!NFE2L1;;chr17:70117153..70117174,+!p1@SOX9!0.99!93.40!SOX9;;chr6:10412600..10412637,-!p1@TFAP2A!0.98!14.44!TFAP2A;;chr12:66218378..66218401,+!p6@HMGA2!0.98!13.54!HMGA2;;chr20:50721803..50721857,-!p2@ZFP64!0.96!13.08!ZFP64;;chr7:27192185..27192209,-!p1@HOXA3!0.96!8.12!HOXA3;;chr7:27224842..27224872,-!p1@HOXA11!0.96!8.12!HOXA11;;chr2:177053386..177053402,+!p1@HOXD1!0.96!8.12!HOXD1;;chr4:299227..299272,-!p1@ZNF732!0.96!8.12!ZNF732;;chr6:21593973..21593988,+!p1@SOX4!0.92!277.04!SOX4;;chr12:66218183..66218209,+!p4@HMGA2!0.92!14.44!HMGA2;;chr2:122042770..122042785,-!p1@TFCP2L1!0.91!7.22!TFCP2L1;;chr11:61520075..61520136,+!p1@C11orf9!0.89!14.89!C11orf9;;chr12:54378923..54378966,+!p1@HOXC10!0.89!6.77!HOXC10;;chr7:27153454..27153469,-!p2@HOXA3!0.89!6.77!HOXA3;;chr13:73633131..73633149,+!p1@KLF5!0.88!74.45!KLF5;;chr20:31350184..31350200,+!p1@DNMT3B!0.87!13.99!DNMT3B;;chr1:24646002..24646013,+!p3@GRHL3!0.86!6.32!GRHL3;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.86!6.32!HOXC5;;chr14:38064429..38064486,-!p1@FOXA1!0.86!6.32!FOXA1;;chr6:50786591..50786614,+!p1@TFAP2B!0.86!6.32!TFAP2B;;chr16:86600870..86600921,+!p2@FOXC2!0.86!6.32!FOXC2;;chr17:46703528..46703549,-!p5@HOXB9!0.86!6.32!HOXB9;;chr17:46688334..46688385,-!p1@HOXB7!0.85!9.02!HOXB7;;chr20:6748325..6748352,+!p1@BMP2!0.85!9.02!BMP2;;chr17:46667594..46667619,-!p1@HOXB3!0.84!5.87!HOXB3;;chr17:46692457..46692484,-!p2@HOXB8!0.84!5.87!HOXB8;;chr17:7493405..7493419,-!p1@SOX15!0.84!5.87!SOX15;;chr10:102505327..102505344,+!p1@PAX2!0.84!5.87!PAX2;;chr7:27196217..27196246,-!p2@HOXA7!0.84!5.87!HOXA7;;chr17:46622070..46622109,-!p1@HOXB2!0.83!13.54!HOXB2;;chr12:3069037..3069119,+!p2@TEAD4!0.82!20.76!TEAD4;;chr12:54447599..54447630,+!p3@HOXC4!0.81!6.77!HOXC4;;chr11:65554563..65554576,+!p2@OVOL1!0.81!5.41!OVOL1;;chr5:3595961..3595975,+!p3@IRX1!0.81!5.41!IRX1;;chr21:38071403..38071428,+!p2@SIM2!0.81!5.41!SIM2;;chr16:51185318..51185348,-!p2@SALL1!0.81!5.41!SALL1;;chr12:66218836..66218888,+!p1@HMGA2!0.80!54.14!HMGA2;;chr2:239148671..239148686,-!p1@HES6!0.80!20.76!HES6;;chr17:46622114..46622138,-!p4@HOXB2!0.79!8.12!HOXB2;;chr11:65667846..65667868,-!p1@FOSL1!0.78!146.19!FOSL1;;chr17:46687959..46688007,-!p2@HOXB7!0.78!7.22!HOXB7;;chr17:46703826..46703845,-!p3@HOXB9!0.78!4.96!HOXB9;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!0.78!4.96!POU3F3;;chr2:176973498..176973524,+!p1@HOXD10!0.78!4.96!HOXD10;;chr3:111314186..111314204,-!p1@ZBED2!0.78!4.96!ZBED2;;chr5:2751785..2751808,-!p2@IRX2!0.78!4.96!IRX2;;chr22:41697497..41697515,+!p2@ZC3H7B!0.77!14.44!ZC3H7B;;chr3:52001426..52001447,-!p3@PCBP4!0.76!14.44!PCBP4;;chr17:41622834..41622883,-!p6@ETV4!0.76!5.87!ETV4;;chr20:42295745..42295765,+!p1@MYBL2!0.75!84.37!MYBL2;;chr10:104155480..104155534,+!p2@NFKB2!0.75!32.94!NFKB2;;chr17:46655704..46655718,-!p2@HOXB4!0.75!7.22!HOXB4;;chr17:41622765..41622821,-!p2@ETV4!0.74!7.22!ETV4;;chr10:8095593..8095625,+!p3@GATA3!0.74!5.41!GATA3;;chr10:119302232..119302265,+!p1@EMX2!0.74!4.51!EMX2;;chr16:51185172..51185197,-!p1@SALL1!0.74!4.51!SALL1;;chr16:52581025..52581072,-!p1@TOX3!0.74!4.51!TOX3;;chr17:36105074..36105086,-!p2@HNF1B!0.74!4.51!HNF1B;;chr6:1610293..1610310,+!p1@FOXC1!0.73!7.67!FOXC1;;chr19:49864746..49864780,-!p2@TEAD2!0.73!6.32!TEAD2;;chr18:3450161..3450183,+!p1@TGIF1!0.72!162.43!TGIF1;;chr17:41623009..41623053,-!p4@ETV4!0.72!7.22!ETV4;;chr15:83953397..83953425,-!p1@BNC1!0.72!4.96!BNC1;;chr12:66218443..66218461,+!p8@HMGA2!0.71!5.41!HMGA2;;chr7:44143925..44143970,+!p1@AEBP1!0.70!101.97!AEBP1;;chr22:42229246..42229270,+!p2@SREBF2!0.70!57.75!SREBF2;;chr19:45260775..45260838,+!p5@BCL3!0.70!5.41!BCL3;;chr1:24645832..24645853,+!p1@GRHL3!0.70!4.06!GRHL3;;chr1:24645921..24645973,+!p2@GRHL3!0.70!4.06!GRHL3;;chr2:176972000..176972025,+!p4@HOXD11!0.70!4.06!HOXD11;;chr10:119302645..119302712,+!p3@EMX2!0.70!4.06!EMX2;;chr7:27213893..27213954,-!p1@HOXA10!0.70!4.06!HOXA10;;chr7:27219833..27219845,-!p7@HOXA10!0.70!4.06!HOXA10;;chr17:46675619..46675642,-!p5@HOXB6!0.70!4.06!HOXB6;;chr19:45504688..45504782,+!p1@RELB!0.69!27.07!RELB;;chr10:104154246..104154347,+!p3@NFKB2!0.68!26.17!NFKB2;;chr19:45252008..45252024,+!p2@BCL3!0.68!13.99!BCL3;;chr17:46621937..46621966,-!p2@HOXB2!0.68!11.28!HOXB2;;chr8:128748308..128748324,+!p2@MYC!0.67!118.21!MYC;;chr20:42295713..42295738,+!p2@MYBL2!0.67!24.82!MYBL2;;chr17:41622925..41622976,-!p3@ETV4!0.67!5.87!ETV4;;chr11:63684602..63684664,-!p1@RCOR2!0.66!7.67!RCOR2;;chr15:80696703..80696754,+!p1@ARNT2!0.66!4.96!ARNT2;;chr17:46667628..46667642,-!p2@HOXB3!0.66!3.61!HOXB3;;chr17:46690839..46690884,-!p1@HOXB8!0.66!3.61!HOXB8;;chr5:3595977..3595999,+!p1@IRX1!0.66!3.61!IRX1;;chr6:10419824..10419840,-!p9@TFAP2A!0.66!3.61!TFAP2A;;chr6:134210243..134210257,+!p1@TCF21!0.66!3.61!TCF21;;chr7:27196267..27196311,-!p1@HOXA7!0.66!3.61!HOXA7;;chr7:27219849..27219867,-!p6@HOXA10!0.66!3.61!HOXA10;;chr2:16080659..16080685,+!p1@MYCN!0.66!3.61!MYCN;;chr2:177001290..177001315,+!p1@HOXD3!0.66!3.61!HOXD3;;chr2:5832493..5832507,+!p2@SOX11!0.66!3.61!SOX11;;chr7:26191809..26191890,+!p1@NFE2L3!0.65!19.85!NFE2L3;;chr6:21597765..21597779,+!p2@SOX4!0.64!31.58!SOX4;;chr5:76383133..76383186,-!p2@ZBED3!0.64!7.67!ZBED3;;chr19:17356436..17356481,-!p3@NR2F6!0.64!6.32!NR2F6;;chr1:151032860..151032918,+!p1@MLLT11!0.63!46.47!MLLT11;;chr6:44233252..44233296,-!p1@NFKBIE!0.63!37.90!NFKBIE;;chr19:49865646..49865718,-!p1@TEAD2!0.63!33.39!TEAD2;;chr17:7492684..7492778,-!p2@SOX15!0.63!7.67!SOX15;;chr12:80084303..80084332,-!p1@PAWR!0.62!22.11!PAWR;;chr8:60031619..60031676,-!p1@TOX!0.62!7.67!TOX;;chr1:247171347..247171366,-!p2@ZNF695!0.62!6.32!ZNF695;;chr10:119303078..119303169,+!p2@EMX2!0.62!3.16!EMX2;;chr17:46622175..46622186,-!p12@HOXB2!0.62!3.16!HOXB2;;chr17:46692318..46692362,-!p5@HOXB8!0.62!3.16!HOXB8;;chr2:176969228..176969260,+!p1@HOXD11!0.62!3.16!HOXD11;;chr3:69915385..69915438,+!p3@MITF!0.62!3.16!MITF;;chr6:1312155..1312187,+!p2@FOXQ1!0.62!3.16!FOXQ1;;chr7:27183291..27183324,-!p1@HOXA5!0.62!3.16!HOXA5;;chr11:65667884..65667895,-!p2@FOSL1!0.61!13.99!FOSL1;;chr17:46675420..46675465,-!p3@HOXB6!0.61!3.61!HOXB6;;chr19:45908292..45908374,-!p1@PPP1R13L!0.60!31.58!PPP1R13L;;chr3:52001396..52001425,-!p4@PCBP4!0.60!5.87!PCBP4;;chr12:80084137..80084165,-!p10@PAWR!0.60!4.06!PAWR;;chr6:34204642..34204664,+!p2@HMGA1!0.59!476.02!HMGA1;;chr20:42136308..42136358,+!p2@L3MBTL1!0.59!4.06!L3MBTL;;chr3:52001448..52001478,-!p2@PCBP4!0.58!48.28!PCBP4;;chr12:80084737..80084763,-!p3@PAWR!0.58!12.63!PAWR;;chr14:21994337..21994442,-!p1@SALL2!0.58!9.02!SALL2;;chr18:74072572..74072588,-!p2@ZNF516!0.58!4.96!ZNF516;;chr1:935467..935484,-!p1@HES4!0.57!14.44!HES4;;chr7:28448965..28448994,+!p2@CREB5!0.57!11.28!CREB5;;chr20:50808667..50808729,-!p3@ZFP64!0.57!5.87!ZFP64;;chr22:30162893..30162907,-!p2@ZMAT5!0.57!3.61!ZMAT5;;chr3:69915369..69915381,+!p4@MITF!0.57!2.71!MITF;;chr17:41622982..41623001,-!p11@ETV4!0.57!2.71!ETV4;;chr17:41623716..41623727,-!p12@ETV4!0.57!2.71!ETV4;;chr17:46131916..46131952,+!p7@NFE2L1!0.57!2.71!NFE2L1;;chr17:46675539..46675551,-!p7@HOXB6!0.57!2.71!HOXB6;;chr17:46692624..46692659,-!p3@HOXB8!0.57!2.71!HOXB8;;chr17:46703436..46703460,-!p7@HOXB9!0.57!2.71!HOXB9;;chr12:66218420..66218439,+!p12@HMGA2!0.57!2.71!HMGA2;;chr5:3595934..3595957,+!p2@IRX1!0.57!2.71!IRX1;;chr6:10415263..10415274,-!p8@TFAP2A!0.57!2.71!TFAP2A;;chr7:101917407..101917443,+!p3@CUX1!0.57!2.71!CUX1;;chr8:67874805..67874831,-!p1@TCF24!0.57!2.71!TCF24;;chrY:21906594..21906622,-!p1@KDM5D!0.57!2.71!KDM5D;;chr8:128749984..128750033,+!p4@MYC!0.56!11.28!MYC;;chr19:36545291..36545314,-!p2@THAP8!0.56!7.67!THAP8;;chr19:53496768..53496799,-!p1@ZNF702P!0.56!4.51!ZNF702P;;chr19:58987711..58987729,+!p2@ZNF446!0.56!4.51!ZNF446;;chr17:40440225..40440268,+!p3@STAT5A!0.56!3.61!STAT5A;;chr3:12330560..12330579,+!p1@PPARG!0.56!3.16!PPARG;;chr14:69259772..69259790,-!p1@ZFP36L1!0.55!332.08!ZFP36L1;;chr22:42229100..42229146,+!p1@SRE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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002518;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002584;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:1000494;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000353;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001008;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002113;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 34: Line 43:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Renal%2520Cortical%2520Epithelial%2520Cells%252c%2520donor1.CNhs11331.11516-119H4.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Renal%2520Cortical%2520Epithelial%2520Cells%252c%2520donor1.CNhs11331.11516-119H4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Renal%2520Cortical%2520Epithelial%2520Cells%252c%2520donor1.CNhs11331.11516-119H4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Renal%2520Cortical%2520Epithelial%2520Cells%252c%2520donor1.CNhs11331.11516-119H4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Renal%2520Cortical%2520Epithelial%2520Cells%252c%2520donor1.CNhs11331.11516-119H4.hg38.nobarcode.ctss.bed.gz
|id=FF:11516-119H4
|id=FF:11516-119H4
|is_a=EFO:0002091;;FF:0000002;;FF:0000152;;FF:0000210
|is_a=EFO:0002091;;FF:0000152
|is_obsolete=
|library_id=CNhs11331
|library_id_phase_based=2:CNhs11331
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11516
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10002.GATCAG.11516
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11516
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10002.GATCAG.11516
|name=Renal Cortical Epithelial Cells, donor1
|name=Renal Cortical Epithelial Cells, donor1
|namespace=FANTOM5
|namespace=FANTOM5
Line 41: Line 64:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11331,LSID768,release014,COMPLETED
|profile_hcage=CNhs11331,LSID768,release014,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=SRhi10002,,,
|profile_srnaseq=SRhi10002,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=119
|rna_box=119
|rna_catalog_number=SC4115
|rna_catalog_number=SC4115
Line 55: Line 81:
|rna_tube_id=119H4
|rna_tube_id=119H4
|rna_weight_ug=10
|rna_weight_ug=10
|rnaseq_library_id=SRhi10002.GATCAG
|sample_age=
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=lot:0787
|sample_cell_catalog=lot:0787
|sample_cell_line=
|sample_cell_line=
Line 68: Line 96:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.94726163892124e-206!GO:0005737;cytoplasm;1.56309031853365e-192!GO:0043226;organelle;2.4694568744761e-159!GO:0043229;intracellular organelle;3.12391028531737e-159!GO:0043231;intracellular membrane-bound organelle;2.78989295980043e-152!GO:0043227;membrane-bound organelle;7.73265349889237e-152!GO:0044444;cytoplasmic part;3.62687773628999e-134!GO:0044422;organelle part;9.05378033491127e-127!GO:0044446;intracellular organelle part;1.11310526017081e-125!GO:0032991;macromolecular complex;2.21201551240554e-75!GO:0005515;protein binding;6.70938261206351e-75!GO:0044238;primary metabolic process;1.37671855546746e-72!GO:0044237;cellular metabolic process;3.54627485753548e-72!GO:0030529;ribonucleoprotein complex;1.54731891221677e-70!GO:0005739;mitochondrion;4.0291467015736e-69!GO:0043170;macromolecule metabolic process;2.7837353726208e-61!GO:0043233;organelle lumen;1.59748358442827e-54!GO:0031974;membrane-enclosed lumen;1.59748358442827e-54!GO:0031090;organelle membrane;9.61180397734542e-51!GO:0005840;ribosome;3.00024620012816e-50!GO:0003723;RNA binding;7.61101673499284e-50!GO:0019538;protein metabolic process;1.19850251351466e-49!GO:0044428;nuclear part;1.70952750037103e-48!GO:0009058;biosynthetic process;4.35741094698328e-48!GO:0006412;translation;2.62860606217035e-46!GO:0044429;mitochondrial part;1.98439564190382e-45!GO:0005634;nucleus;5.44318892748606e-45!GO:0016043;cellular component organization and biogenesis;8.06668813602241e-45!GO:0044260;cellular macromolecule metabolic process;1.15831460140668e-44!GO:0003735;structural constituent of ribosome;2.21355196431829e-44!GO:0044267;cellular protein metabolic process;2.9755633120261e-44!GO:0044249;cellular biosynthetic process;3.20851890302702e-43!GO:0031967;organelle envelope;1.6257539045979e-39!GO:0031975;envelope;4.09782548178847e-39!GO:0009059;macromolecule biosynthetic process;9.9170579227023e-39!GO:0033279;ribosomal subunit;2.88962246537139e-38!GO:0043234;protein complex;2.24718434490728e-37!GO:0033036;macromolecule localization;2.50901433493708e-36!GO:0015031;protein transport;7.37427791621936e-36!GO:0008104;protein localization;2.6582510024209e-34!GO:0005829;cytosol;2.05253574629189e-33!GO:0045184;establishment of protein localization;2.70960004777553e-33!GO:0006996;organelle organization and biogenesis;1.13193488885557e-32!GO:0043228;non-membrane-bound organelle;1.61645662508263e-32!GO:0043232;intracellular non-membrane-bound organelle;1.61645662508263e-32!GO:0005740;mitochondrial envelope;4.04314488545118e-31!GO:0006396;RNA processing;3.88496378063687e-30!GO:0046907;intracellular transport;2.05969282759828e-29!GO:0043283;biopolymer metabolic process;2.35705669869929e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.19714943702228e-29!GO:0031966;mitochondrial membrane;1.00278215631932e-28!GO:0031981;nuclear lumen;1.05120394632235e-28!GO:0019866;organelle inner membrane;9.42280002815467e-28!GO:0005743;mitochondrial inner membrane;1.51915319997714e-26!GO:0065003;macromolecular complex assembly;5.10763138736563e-26!GO:0006886;intracellular protein transport;1.89342496768652e-24!GO:0016071;mRNA metabolic process;5.70490156063571e-24!GO:0022607;cellular component assembly;8.11816276039811e-24!GO:0044445;cytosolic part;6.42017143343987e-23!GO:0010467;gene expression;9.82685617913272e-23!GO:0008380;RNA splicing;2.96019116377915e-22!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.47223650340043e-21!GO:0006397;mRNA processing;1.56945550796352e-20!GO:0006259;DNA metabolic process;3.2887498916654e-20!GO:0012505;endomembrane system;4.14711316866732e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.62552502238332e-20!GO:0015935;small ribosomal subunit;1.00813413206057e-19!GO:0015934;large ribosomal subunit;1.56463252401924e-19!GO:0051641;cellular localization;6.58569167989524e-19!GO:0006119;oxidative phosphorylation;7.10546469872743e-19!GO:0051649;establishment of cellular localization;1.09067125655912e-18!GO:0007049;cell cycle;1.27323553788403e-18!GO:0048770;pigment granule;2.0929520801313e-18!GO:0042470;melanosome;2.0929520801313e-18!GO:0005783;endoplasmic reticulum;3.02424300708574e-18!GO:0031980;mitochondrial lumen;3.08137045685084e-18!GO:0005759;mitochondrial matrix;3.08137045685084e-18!GO:0044455;mitochondrial membrane part;4.49929442106208e-17!GO:0000166;nucleotide binding;6.19138501427573e-17!GO:0005681;spliceosome;9.27076469349664e-17!GO:0051186;cofactor metabolic process;1.50816605221922e-16!GO:0005654;nucleoplasm;5.57770804562309e-16!GO:0005794;Golgi apparatus;8.43318930260439e-16!GO:0008134;transcription factor binding;9.86935753741947e-16!GO:0044432;endoplasmic reticulum part;1.16246927499266e-15!GO:0006457;protein folding;1.56030669967457e-15!GO:0016874;ligase activity;2.54133373005313e-15!GO:0043412;biopolymer modification;2.692276814561e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.67027231148508e-15!GO:0005746;mitochondrial respiratory chain;1.2425796662436e-14!GO:0022402;cell cycle process;1.24763572260314e-14!GO:0012501;programmed cell death;1.42787395111059e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.01784482164231e-14!GO:0006915;apoptosis;3.48521480637387e-14!GO:0006464;protein modification process;3.53182106142097e-14!GO:0005730;nucleolus;8.32055212512802e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.12346098707334e-13!GO:0044265;cellular macromolecule catabolic process;1.2682892336721e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.84383496447813e-13!GO:0003954;NADH dehydrogenase activity;1.84383496447813e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.84383496447813e-13!GO:0016462;pyrophosphatase activity;1.87825338038796e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.22063778316456e-13!GO:0044451;nucleoplasm part;2.31043664131955e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;2.33368584437285e-13!GO:0006605;protein targeting;3.97453995085325e-13!GO:0044248;cellular catabolic process;3.99082762268893e-13!GO:0005761;mitochondrial ribosome;5.07947088908529e-13!GO:0000313;organellar ribosome;5.07947088908529e-13!GO:0000278;mitotic cell cycle;5.33098168772844e-13!GO:0006732;coenzyme metabolic process;6.09232190124126e-13!GO:0008219;cell death;6.09232190124126e-13!GO:0016265;death;6.09232190124126e-13!GO:0017111;nucleoside-triphosphatase activity;8.01013760704893e-13!GO:0009057;macromolecule catabolic process;1.22876141533639e-12!GO:0032553;ribonucleotide binding;1.22876141533639e-12!GO:0032555;purine ribonucleotide binding;1.22876141533639e-12!GO:0022618;protein-RNA complex assembly;2.61301179696683e-12!GO:0017076;purine nucleotide binding;3.9150188493894e-12!GO:0043285;biopolymer catabolic process;6.76123144187533e-12!GO:0042775;organelle ATP synthesis coupled electron transport;7.49880625501993e-12!GO:0042773;ATP synthesis coupled electron transport;7.49880625501993e-12!GO:0051082;unfolded protein binding;1.09755948056949e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.16614237648486e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.21725804789602e-11!GO:0045271;respiratory chain complex I;1.21725804789602e-11!GO:0005747;mitochondrial respiratory chain complex I;1.21725804789602e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.29664070158459e-11!GO:0005789;endoplasmic reticulum membrane;1.65003424075285e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.59124982571672e-11!GO:0043067;regulation of programmed cell death;3.59863736622345e-11!GO:0042981;regulation of apoptosis;4.93991254330438e-11!GO:0043687;post-translational protein modification;6.11358356097878e-11!GO:0000502;proteasome complex (sensu Eukaryota);7.43524217798269e-11!GO:0006512;ubiquitin cycle;1.48284638249306e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;1.49943818858572e-10!GO:0009055;electron carrier activity;1.52509167169196e-10!GO:0019941;modification-dependent protein catabolic process;2.07133890934497e-10!GO:0043632;modification-dependent macromolecule catabolic process;2.07133890934497e-10!GO:0005524;ATP binding;2.16007761114182e-10!GO:0044427;chromosomal part;2.32698070024928e-10!GO:0051276;chromosome organization and biogenesis;2.52434000794949e-10!GO:0032559;adenyl ribonucleotide binding;2.67131932936678e-10!GO:0044257;cellular protein catabolic process;2.85303101003043e-10!GO:0006511;ubiquitin-dependent protein catabolic process;3.21661774510623e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;3.44714692430391e-10!GO:0048523;negative regulation of cellular process;3.69612634960495e-10!GO:0005694;chromosome;5.55676565043656e-10!GO:0016192;vesicle-mediated transport;5.70286024823647e-10!GO:0016740;transferase activity;5.70315634715628e-10!GO:0003712;transcription cofactor activity;6.51670195445523e-10!GO:0030163;protein catabolic process;8.54753830703237e-10!GO:0030554;adenyl nucleotide binding;1.05944452850152e-09!GO:0005635;nuclear envelope;1.11810968399844e-09!GO:0000074;regulation of progression through cell cycle;1.40054039204314e-09!GO:0051726;regulation of cell cycle;1.43527551577317e-09!GO:0006323;DNA packaging;1.57622366661607e-09!GO:0000785;chromatin;1.61730332232662e-09!GO:0007005;mitochondrion organization and biogenesis;1.67372638713264e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;2.32022549706702e-09!GO:0000375;RNA splicing, via transesterification reactions;2.32022549706702e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.32022549706702e-09!GO:0008135;translation factor activity, nucleic acid binding;2.46461422994138e-09!GO:0048193;Golgi vesicle transport;3.25256701666217e-09!GO:0022403;cell cycle phase;3.87901701844647e-09!GO:0048519;negative regulation of biological process;4.55090350868615e-09!GO:0051188;cofactor biosynthetic process;5.03367796201128e-09!GO:0006163;purine nucleotide metabolic process;6.66500709526062e-09!GO:0006974;response to DNA damage stimulus;7.49256888120731e-09!GO:0009259;ribonucleotide metabolic process;1.12047490899005e-08!GO:0005768;endosome;1.22311133107093e-08!GO:0006399;tRNA metabolic process;1.47407340479612e-08!GO:0009056;catabolic process;1.48822206594827e-08!GO:0009150;purine ribonucleotide metabolic process;1.81122227019885e-08!GO:0007067;mitosis;1.90579233071058e-08!GO:0000087;M phase of mitotic cell cycle;1.94194377432647e-08!GO:0031965;nuclear membrane;2.30384068661665e-08!GO:0006461;protein complex assembly;2.60835330820806e-08!GO:0005793;ER-Golgi intermediate compartment;2.82739817781346e-08!GO:0042254;ribosome biogenesis and assembly;3.09791196737153e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.09791196737153e-08!GO:0006164;purine nucleotide biosynthetic process;3.45329306347713e-08!GO:0043069;negative regulation of programmed cell death;3.95488944757065e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.15284885220913e-08!GO:0006333;chromatin assembly or disassembly;4.67521737789247e-08!GO:0006913;nucleocytoplasmic transport;5.08146504704127e-08!GO:0030532;small nuclear ribonucleoprotein complex;7.00149076086659e-08!GO:0006446;regulation of translational initiation;7.15579487830125e-08!GO:0006413;translational initiation;9.02909742592244e-08!GO:0009260;ribonucleotide biosynthetic process;9.06297489595754e-08!GO:0009152;purine ribonucleotide biosynthetic process;9.28489781792736e-08!GO:0051169;nuclear transport;9.86478803585963e-08!GO:0043066;negative regulation of apoptosis;1.09621219148067e-07!GO:0006916;anti-apoptosis;1.09621219148067e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.12631356237442e-07!GO:0009141;nucleoside triphosphate metabolic process;1.16154877915448e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.30750223309205e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.30750223309205e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.30750223309205e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.32718977040228e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.49133164168751e-07!GO:0017038;protein import;1.49777217871448e-07!GO:0065004;protein-DNA complex assembly;1.7294110083417e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.77734203007247e-07!GO:0003676;nucleic acid binding;2.0987436249606e-07!GO:0008639;small protein conjugating enzyme activity;2.67509934009635e-07!GO:0043038;amino acid activation;2.67509934009635e-07!GO:0006418;tRNA aminoacylation for protein translation;2.67509934009635e-07!GO:0043039;tRNA aminoacylation;2.67509934009635e-07!GO:0006793;phosphorus metabolic process;2.76404423898104e-07!GO:0006796;phosphate metabolic process;2.76404423898104e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.1234141051741e-07!GO:0009144;purine nucleoside triphosphate metabolic process;3.1234141051741e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.16953045728351e-07!GO:0009719;response to endogenous stimulus;3.23068146357316e-07!GO:0044453;nuclear membrane part;3.28709031775762e-07!GO:0003743;translation initiation factor activity;3.78532418523131e-07!GO:0044431;Golgi apparatus part;3.7912014084514e-07!GO:0009117;nucleotide metabolic process;4.04989987063512e-07!GO:0004842;ubiquitin-protein ligase activity;4.85102666270027e-07!GO:0051246;regulation of protein metabolic process;5.09178059922624e-07!GO:0006260;DNA replication;5.12324727963884e-07!GO:0009060;aerobic respiration;6.10161797053291e-07!GO:0009108;coenzyme biosynthetic process;7.85342021906275e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.90801352416819e-07!GO:0006281;DNA repair;8.26476054823909e-07!GO:0019787;small conjugating protein ligase activity;8.95665459941433e-07!GO:0031497;chromatin assembly;9.35578228170867e-07!GO:0006334;nucleosome assembly;9.39362541296076e-07!GO:0009142;nucleoside triphosphate biosynthetic process;9.39723242768639e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.39723242768639e-07!GO:0015986;ATP synthesis coupled proton transport;9.83653869532363e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.83653869532363e-07!GO:0008565;protein transporter activity;9.83653869532363e-07!GO:0042623;ATPase activity, coupled;1.06694462163056e-06!GO:0006366;transcription from RNA polymerase II promoter;1.15452800088227e-06!GO:0000279;M phase;1.28983618105669e-06!GO:0015630;microtubule cytoskeleton;1.5576384111039e-06!GO:0016070;RNA metabolic process;1.60132591180286e-06!GO:0065002;intracellular protein transport across a membrane;1.67267793178028e-06!GO:0050794;regulation of cellular process;1.72146640304613e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.78987157218879e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.86754622740308e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.9536848037325e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.9536848037325e-06!GO:0005773;vacuole;2.12352293509137e-06!GO:0016881;acid-amino acid ligase activity;2.13543294694093e-06!GO:0045333;cellular respiration;2.24957764899063e-06!GO:0046034;ATP metabolic process;2.26695956856097e-06!GO:0016604;nuclear body;2.28915866929718e-06!GO:0051301;cell division;2.28915866929718e-06!GO:0019829;cation-transporting ATPase activity;2.55279148364766e-06!GO:0031988;membrane-bound vesicle;3.1973904407664e-06!GO:0003924;GTPase activity;3.43831220164556e-06!GO:0003714;transcription corepressor activity;3.51921968939833e-06!GO:0016126;sterol biosynthetic process;3.61861749233253e-06!GO:0016563;transcription activator activity;4.14961044382341e-06!GO:0031252;leading edge;4.52527370261189e-06!GO:0016310;phosphorylation;5.3156087407858e-06!GO:0016491;oxidoreductase activity;5.32492536539871e-06!GO:0007010;cytoskeleton organization and biogenesis;5.45291508310147e-06!GO:0015078;hydrogen ion transmembrane transporter activity;5.55241267173264e-06!GO:0016787;hydrolase activity;5.82725344612115e-06!GO:0048522;positive regulation of cellular process;5.98205770733383e-06!GO:0048475;coated membrane;6.16730010237288e-06!GO:0030117;membrane coat;6.16730010237288e-06!GO:0008610;lipid biosynthetic process;6.70343572871665e-06!GO:0042802;identical protein binding;6.70343572871665e-06!GO:0005643;nuclear pore;7.130407975622e-06!GO:0016887;ATPase activity;8.02283210826079e-06!GO:0030120;vesicle coat;9.1312709947249e-06!GO:0030662;coated vesicle membrane;9.1312709947249e-06!GO:0005788;endoplasmic reticulum lumen;9.25390772420645e-06!GO:0044440;endosomal part;9.42662851488556e-06!GO:0010008;endosome membrane;9.42662851488556e-06!GO:0008654;phospholipid biosynthetic process;1.11384740047192e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.19504439134983e-05!GO:0006754;ATP biosynthetic process;1.35550172046504e-05!GO:0006753;nucleoside phosphate metabolic process;1.35550172046504e-05!GO:0006364;rRNA processing;1.55779129294226e-05!GO:0045454;cell redox homeostasis;1.55779129294226e-05!GO:0000323;lytic vacuole;1.67518735363733e-05!GO:0005764;lysosome;1.67518735363733e-05!GO:0000139;Golgi membrane;1.75791161443974e-05!GO:0045259;proton-transporting ATP synthase complex;1.82530372183526e-05!GO:0006099;tricarboxylic acid cycle;1.89995097173413e-05!GO:0046356;acetyl-CoA catabolic process;1.89995097173413e-05!GO:0005762;mitochondrial large ribosomal subunit;1.98409335276293e-05!GO:0000315;organellar large ribosomal subunit;1.98409335276293e-05!GO:0016564;transcription repressor activity;2.04425518162697e-05!GO:0031410;cytoplasmic vesicle;2.05352042357476e-05!GO:0016568;chromatin modification;2.07030800123209e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.28210255019164e-05!GO:0048468;cell development;2.34344112681945e-05!GO:0006084;acetyl-CoA metabolic process;2.51871254791398e-05!GO:0031982;vesicle;2.52485925692811e-05!GO:0032446;protein modification by small protein conjugation;2.56667126783478e-05!GO:0016072;rRNA metabolic process;2.61441184654103e-05!GO:0005770;late endosome;2.82539142029312e-05!GO:0019899;enzyme binding;2.82539142029312e-05!GO:0006082;organic acid metabolic process;3.34071884365515e-05!GO:0006752;group transfer coenzyme metabolic process;3.41970931840365e-05!GO:0007264;small GTPase mediated signal transduction;3.50264515309148e-05!GO:0006695;cholesterol biosynthetic process;3.52144409183091e-05!GO:0016567;protein ubiquitination;3.5268201440993e-05!GO:0045786;negative regulation of progression through cell cycle;3.55537648518678e-05!GO:0019752;carboxylic acid metabolic process;3.829192759182e-05!GO:0016469;proton-transporting two-sector ATPase complex;3.87516946523506e-05!GO:0016853;isomerase activity;4.31085300231916e-05!GO:0051187;cofactor catabolic process;4.63193449793552e-05!GO:0051329;interphase of mitotic cell cycle;5.56694029432672e-05!GO:0031324;negative regulation of cellular metabolic process;6.01017023338885e-05!GO:0051170;nuclear import;6.11982522825741e-05!GO:0065009;regulation of a molecular function;7.212631900286e-05!GO:0005667;transcription factor complex;7.54872119324532e-05!GO:0044262;cellular carbohydrate metabolic process;8.34989292373887e-05!GO:0006606;protein import into nucleus;8.85059600588961e-05!GO:0009109;coenzyme catabolic process;9.28076964065797e-05!GO:0046930;pore complex;9.6124344993181e-05!GO:0007243;protein kinase cascade;9.75867911489815e-05!GO:0051427;hormone receptor binding;9.79489459071414e-05!GO:0016607;nuclear speck;9.96255031550356e-05!GO:0009892;negative regulation of metabolic process;0.00010057229531981!GO:0005905;coated pit;0.000102724367030784!GO:0051325;interphase;0.000118053881374139!GO:0030029;actin filament-based process;0.00012371721988531!GO:0006888;ER to Golgi vesicle-mediated transport;0.000123925349265903!GO:0005525;GTP binding;0.000125681829595789!GO:0003713;transcription coactivator activity;0.000133459174435247!GO:0016779;nucleotidyltransferase activity;0.000139586079883998!GO:0003697;single-stranded DNA binding;0.000143411299391884!GO:0050789;regulation of biological process;0.000176615292833108!GO:0035257;nuclear hormone receptor binding;0.000179086152932784!GO:0000245;spliceosome assembly;0.000211936653803042!GO:0030176;integral to endoplasmic reticulum membrane;0.00021353856845239!GO:0004298;threonine endopeptidase activity;0.000236839608261431!GO:0019843;rRNA binding;0.000265541094903539!GO:0043065;positive regulation of apoptosis;0.000274015128698945!GO:0046474;glycerophospholipid biosynthetic process;0.000282646725450791!GO:0008026;ATP-dependent helicase activity;0.00028586681452128!GO:0008637;apoptotic mitochondrial changes;0.000298345052131119!GO:0006403;RNA localization;0.000305772737381194!GO:0048518;positive regulation of biological process;0.000321804727664536!GO:0030118;clathrin coat;0.000323230055532526!GO:0050657;nucleic acid transport;0.000324803403233676!GO:0051236;establishment of RNA localization;0.000324803403233676!GO:0050658;RNA transport;0.000324803403233676!GO:0043068;positive regulation of programmed cell death;0.000346859770301914!GO:0033116;ER-Golgi intermediate compartment membrane;0.000359254813194194!GO:0006839;mitochondrial transport;0.000371416529404172!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000388107240552475!GO:0000314;organellar small ribosomal subunit;0.00041265462512554!GO:0005763;mitochondrial small ribosomal subunit;0.00041265462512554!GO:0043623;cellular protein complex assembly;0.000443225798403291!GO:0000786;nucleosome;0.000480442006573783!GO:0016044;membrane organization and biogenesis;0.000490408060955555!GO:0004386;helicase activity;0.000524798065709368!GO:0008092;cytoskeletal protein binding;0.000526240620237536!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000527109743601632!GO:0008632;apoptotic program;0.000527109743601632!GO:0048471;perinuclear region of cytoplasm;0.000590486453781205!GO:0008250;oligosaccharyl transferase complex;0.000623482889621122!GO:0005874;microtubule;0.000641402918675381!GO:0009967;positive regulation of signal transduction;0.00065007894493641!GO:0008361;regulation of cell size;0.000667555058885285!GO:0009165;nucleotide biosynthetic process;0.000707143183340119!GO:0015980;energy derivation by oxidation of organic compounds;0.000740923513043966!GO:0001558;regulation of cell growth;0.000760651357983783!GO:0006091;generation of precursor metabolites and energy;0.000764237610065871!GO:0006520;amino acid metabolic process;0.000766942474473566!GO:0005791;rough endoplasmic reticulum;0.00078683154425255!GO:0016049;cell growth;0.00078747343222308!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00080078100294664!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000805310872018499!GO:0032561;guanyl ribonucleotide binding;0.000808524626832218!GO:0019001;guanyl nucleotide binding;0.000808524626832218!GO:0006626;protein targeting to mitochondrion;0.000822319230642812!GO:0030867;rough endoplasmic reticulum membrane;0.000822319230642812!GO:0003899;DNA-directed RNA polymerase activity;0.000839137564464097!GO:0031968;organelle outer membrane;0.000977843161539491!GO:0043566;structure-specific DNA binding;0.000998596012628225!GO:0046467;membrane lipid biosynthetic process;0.00101619468769541!GO:0016481;negative regulation of transcription;0.00108572362121292!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00109151288327715!GO:0001836;release of cytochrome c from mitochondria;0.00117342627491052!GO:0005048;signal sequence binding;0.00117661824078282!GO:0051920;peroxiredoxin activity;0.00120323543274415!GO:0005798;Golgi-associated vesicle;0.00124689997466957!GO:0043681;protein import into mitochondrion;0.00126618037726604!GO:0019867;outer membrane;0.00134033013816712!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00134285924265464!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00135127243634281!GO:0005769;early endosome;0.00140759344573026!GO:0030119;AP-type membrane coat adaptor complex;0.00143574077416237!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00153486320867645!GO:0005741;mitochondrial outer membrane;0.00157727353021913!GO:0030133;transport vesicle;0.00172251039891123!GO:0007006;mitochondrial membrane organization and biogenesis;0.0017856319516729!GO:0030131;clathrin adaptor complex;0.00182869111222653!GO:0001726;ruffle;0.00188862468334354!GO:0004674;protein serine/threonine kinase activity;0.00189577405388691!GO:0018196;peptidyl-asparagine modification;0.00190685720243074!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00190685720243074!GO:0005885;Arp2/3 protein complex;0.00191441025172544!GO:0006979;response to oxidative stress;0.00191905671052137!GO:0043021;ribonucleoprotein binding;0.00191905671052137!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00191905671052137!GO:0016859;cis-trans isomerase activity;0.00193457428159514!GO:0051789;response to protein stimulus;0.00195124229831129!GO:0006986;response to unfolded protein;0.00195124229831129!GO:0016301;kinase activity;0.001970824921335!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00205692164428492!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00211531431410916!GO:0005813;centrosome;0.00231787130567316!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00234973058560813!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00237736964074399!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00239586980830069!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00243773141820216!GO:0031902;late endosome membrane;0.00244319301904917!GO:0006613;cotranslational protein targeting to membrane;0.00256596906665149!GO:0019318;hexose metabolic process;0.00290852718859072!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00292138923414373!GO:0005774;vacuolar membrane;0.00293239293109016!GO:0045941;positive regulation of transcription;0.00305218102526087!GO:0005815;microtubule organizing center;0.00307904184032847!GO:0007265;Ras protein signal transduction;0.00322151725546471!GO:0006740;NADPH regeneration;0.00322957288589804!GO:0006098;pentose-phosphate shunt;0.00322957288589804!GO:0043488;regulation of mRNA stability;0.00335788143674151!GO:0043487;regulation of RNA stability;0.00335788143674151!GO:0005996;monosaccharide metabolic process;0.0034262210623906!GO:0000151;ubiquitin ligase complex;0.00346241900329507!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00355557669495411!GO:0046489;phosphoinositide biosynthetic process;0.00358180775125207!GO:0051028;mRNA transport;0.00360221533382921!GO:0045893;positive regulation of transcription, DNA-dependent;0.00410838563783019!GO:0015992;proton transport;0.00412166694625421!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0042472956797068!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0042472956797068!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0042472956797068!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00425328433802352!GO:0030031;cell projection biogenesis;0.00438972996478847!GO:0040008;regulation of growth;0.00446100482645811!GO:0030132;clathrin coat of coated pit;0.00446987471378932!GO:0008283;cell proliferation;0.00453877269002405!GO:0006818;hydrogen transport;0.00456777194616408!GO:0051101;regulation of DNA binding;0.00473980056287704!GO:0004576;oligosaccharyl transferase activity;0.0048124151346225!GO:0017166;vinculin binding;0.0048124151346225!GO:0030027;lamellipodium;0.00483385900672361!GO:0006066;alcohol metabolic process;0.00489320656291763!GO:0006007;glucose catabolic process;0.00492419280642694!GO:0005819;spindle;0.00501873303115639!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00523238335578071!GO:0015399;primary active transmembrane transporter activity;0.00523238335578071!GO:0005684;U2-dependent spliceosome;0.00523238335578071!GO:0003724;RNA helicase activity;0.00525824594386562!GO:0006917;induction of apoptosis;0.00531645124692155!GO:0006778;porphyrin metabolic process;0.00537391114912272!GO:0033013;tetrapyrrole metabolic process;0.00537391114912272!GO:0030880;RNA polymerase complex;0.00541154313594067!GO:0006414;translational elongation;0.00554599723759294!GO:0030145;manganese ion binding;0.00557392582960339!GO:0030125;clathrin vesicle coat;0.00557392582960339!GO:0030665;clathrin coated vesicle membrane;0.00557392582960339!GO:0016272;prefoldin complex;0.00561546137196975!GO:0016125;sterol metabolic process;0.00570223951677407!GO:0044255;cellular lipid metabolic process;0.00610562595106618!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00610847163246343!GO:0030658;transport vesicle membrane;0.00673615623932517!GO:0009966;regulation of signal transduction;0.00673615623932517!GO:0001666;response to hypoxia;0.00708224747148286!GO:0006643;membrane lipid metabolic process;0.00708224747148286!GO:0012502;induction of programmed cell death;0.00730870605101001!GO:0006650;glycerophospholipid metabolic process;0.00745566226520536!GO:0046483;heterocycle metabolic process;0.00769534710340026!GO:0006595;polyamine metabolic process;0.00786606338294502!GO:0050790;regulation of catalytic activity;0.00794408460780782!GO:0007088;regulation of mitosis;0.0079957576218092!GO:0008033;tRNA processing;0.00807121733320864!GO:0008629;induction of apoptosis by intracellular signals;0.00808780072550096!GO:0044437;vacuolar part;0.00811330058622129!GO:0005765;lysosomal membrane;0.00851564126340491!GO:0043154;negative regulation of caspase activity;0.00856537544356625!GO:0006807;nitrogen compound metabolic process;0.00897332996693324!GO:0048487;beta-tubulin binding;0.00908525401101557!GO:0035258;steroid hormone receptor binding;0.00909096630573399!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00921825797837356!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00921825797837356!GO:0051252;regulation of RNA metabolic process;0.00963470959020535!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.010087278894064!GO:0030659;cytoplasmic vesicle membrane;0.0102700567782491!GO:0051287;NAD binding;0.0107468712715966!GO:0050662;coenzyme binding;0.0112993057711551!GO:0006779;porphyrin biosynthetic process;0.0113873371213108!GO:0033014;tetrapyrrole biosynthetic process;0.0113873371213108!GO:0006749;glutathione metabolic process;0.0115593178607833!GO:0006509;membrane protein ectodomain proteolysis;0.0116391444153748!GO:0033619;membrane protein proteolysis;0.0116391444153748!GO:0007242;intracellular signaling cascade;0.0116626228873554!GO:0016311;dephosphorylation;0.0117861778319897!GO:0006612;protein targeting to membrane;0.0118426888373502!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0118426888373502!GO:0000428;DNA-directed RNA polymerase complex;0.0118426888373502!GO:0000096;sulfur amino acid metabolic process;0.0119078598505112!GO:0031072;heat shock protein binding;0.0122211042137326!GO:0008186;RNA-dependent ATPase activity;0.0127204934729039!GO:0006519;amino acid and derivative metabolic process;0.0127883108530227!GO:0043281;regulation of caspase activity;0.0128992926079485!GO:0033673;negative regulation of kinase activity;0.0130072087121762!GO:0006469;negative regulation of protein kinase activity;0.0130072087121762!GO:0030660;Golgi-associated vesicle membrane;0.0134260535332888!GO:0006739;NADP metabolic process;0.0134687575518769!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0140187855414692!GO:0006220;pyrimidine nucleotide metabolic process;0.0140187855414692!GO:0007051;spindle organization and biogenesis;0.0143484459086977!GO:0051348;negative regulation of transferase activity;0.0145300785453576!GO:0042168;heme metabolic process;0.0149062142229708!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0149965723756727!GO:0009308;amine metabolic process;0.0150466916069453!GO:0032508;DNA duplex unwinding;0.0151507893713321!GO:0032392;DNA geometric change;0.0151507893713321!GO:0006402;mRNA catabolic process;0.0152059118324087!GO:0008047;enzyme activator activity;0.0155125977653218!GO:0051087;chaperone binding;0.0156110837804836!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0161999933933652!GO:0015002;heme-copper terminal oxidase activity;0.0161999933933652!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0161999933933652!GO:0004129;cytochrome-c oxidase activity;0.0161999933933652!GO:0006401;RNA catabolic process;0.0162681260762583!GO:0007040;lysosome organization and biogenesis;0.0169034581811985!GO:0006733;oxidoreduction coenzyme metabolic process;0.0171736051186011!GO:0006767;water-soluble vitamin metabolic process;0.0180678700600196!GO:0016860;intramolecular oxidoreductase activity;0.0182309108721898!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0182309108721898!GO:0000049;tRNA binding;0.018274074750187!GO:0051168;nuclear export;0.0182773778227835!GO:0004680;casein kinase activity;0.0183722230038164!GO:0006633;fatty acid biosynthetic process;0.0185056118185727!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0195449976919887!GO:0000118;histone deacetylase complex;0.0195638477203853!GO:0016791;phosphoric monoester hydrolase activity;0.0195638477203853!GO:0051128;regulation of cellular component organization and biogenesis;0.0196886325077425!GO:0046519;sphingoid metabolic process;0.0196886325077425!GO:0015631;tubulin binding;0.0205220126921013!GO:0008139;nuclear localization sequence binding;0.0207418213855768!GO:0005975;carbohydrate metabolic process;0.0215507374776537!GO:0043433;negative regulation of transcription factor activity;0.0216590867786717!GO:0030433;ER-associated protein catabolic process;0.02166348140159!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.02166348140159!GO:0005869;dynactin complex;0.0216635299884472!GO:0006261;DNA-dependent DNA replication;0.0221858570456872!GO:0030503;regulation of cell redox homeostasis;0.022313442522468!GO:0046365;monosaccharide catabolic process;0.0224405284343629!GO:0044452;nucleolar part;0.0225737998007443!GO:0003684;damaged DNA binding;0.0225737998007443!GO:0006644;phospholipid metabolic process;0.0225737998007443!GO:0046822;regulation of nucleocytoplasmic transport;0.0228708776495936!GO:0051098;regulation of binding;0.0229456729922236!GO:0006383;transcription from RNA polymerase III promoter;0.0229609462797697!GO:0051090;regulation of transcription factor activity;0.0229675600147765!GO:0005862;muscle thin filament tropomyosin;0.0232416952809207!GO:0045892;negative regulation of transcription, DNA-dependent;0.0234753519822303!GO:0007266;Rho protein signal transduction;0.0234930849660858!GO:0006950;response to stress;0.0234930849660858!GO:0043284;biopolymer biosynthetic process;0.0234930849660858!GO:0008094;DNA-dependent ATPase activity;0.0237940639045956!GO:0043492;ATPase activity, coupled to movement of substances;0.0238455096820715!GO:0006672;ceramide metabolic process;0.0246664892394038!GO:0040029;regulation of gene expression, epigenetic;0.0247294027170463!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0248610961209797!GO:0000086;G2/M transition of mitotic cell cycle;0.0248657861609985!GO:0048037;cofactor binding;0.0249857827046021!GO:0005657;replication fork;0.0250484197701165!GO:0006268;DNA unwinding during replication;0.0251488192817029!GO:0035035;histone acetyltransferase binding;0.0253865277848047!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0256473649290692!GO:0006506;GPI anchor biosynthetic process;0.0256473649290692!GO:0008538;proteasome activator activity;0.0261384763227588!GO:0065007;biological regulation;0.026343335796796!GO:0007017;microtubule-based process;0.0263810871968724!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0264346312437469!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0271840315904298!GO:0006289;nucleotide-excision repair;0.0272301399945488!GO:0008652;amino acid biosynthetic process;0.0272320907541669!GO:0004004;ATP-dependent RNA helicase activity;0.0272320907541669!GO:0007033;vacuole organization and biogenesis;0.0273207026188919!GO:0046394;carboxylic acid biosynthetic process;0.0275121591736317!GO:0016053;organic acid biosynthetic process;0.0275121591736317!GO:0016197;endosome transport;0.0276266416689339!GO:0000209;protein polyubiquitination;0.0279266393848132!GO:0006984;ER-nuclear signaling pathway;0.028023392673734!GO:0019320;hexose catabolic process;0.0282485198989382!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0282524608678867!GO:0019206;nucleoside kinase activity;0.0283012857654262!GO:0009112;nucleobase metabolic process;0.0283725879364354!GO:0031301;integral to organelle membrane;0.0284985660497202!GO:0008286;insulin receptor signaling pathway;0.0288802191859746!GO:0007346;regulation of progression through mitotic cell cycle;0.0289293305662448!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0290159613381834!GO:0032981;mitochondrial respiratory chain complex I assembly;0.029022883917387!GO:0010257;NADH dehydrogenase complex assembly;0.029022883917387!GO:0033108;mitochondrial respiratory chain complex assembly;0.029022883917387!GO:0016363;nuclear matrix;0.029022883917387!GO:0006783;heme biosynthetic process;0.029022883917387!GO:0006769;nicotinamide metabolic process;0.029022883917387!GO:0006497;protein amino acid lipidation;0.0290622040874637!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0292068919607182!GO:0044433;cytoplasmic vesicle part;0.0295942326235085!GO:0033559;unsaturated fatty acid metabolic process;0.0296520158580689!GO:0006636;unsaturated fatty acid biosynthetic process;0.0296520158580689!GO:0031272;regulation of pseudopodium formation;0.0296520158580689!GO:0031269;pseudopodium formation;0.0296520158580689!GO:0031344;regulation of cell projection organization and biogenesis;0.0296520158580689!GO:0031268;pseudopodium organization and biogenesis;0.0296520158580689!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0296520158580689!GO:0031274;positive regulation of pseudopodium formation;0.0296520158580689!GO:0005083;small GTPase regulator activity;0.0303252810795537!GO:0007021;tubulin folding;0.0306048122546354!GO:0030521;androgen receptor signaling pathway;0.0307657055827514!GO:0008243;plasminogen activator activity;0.0309876343617658!GO:0043189;H4/H2A histone acetyltransferase complex;0.0314925872253088!GO:0005938;cell cortex;0.0316084534060775!GO:0003756;protein disulfide isomerase activity;0.0323424240631695!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0323424240631695!GO:0004177;aminopeptidase activity;0.0323658069907629!GO:0016485;protein processing;0.0326807168829596!GO:0032594;protein transport within lipid bilayer;0.0326807168829596!GO:0032907;transforming growth factor-beta3 production;0.0326807168829596!GO:0032596;protein transport into lipid raft;0.0326807168829596!GO:0032910;regulation of transforming growth factor-beta3 production;0.0326807168829596!GO:0032595;B cell receptor transport within lipid bilayer;0.0326807168829596!GO:0033606;chemokine receptor transport within lipid bilayer;0.0326807168829596!GO:0032600;chemokine receptor transport out of lipid raft;0.0326807168829596!GO:0032599;protein transport out of lipid raft;0.0326807168829596!GO:0032597;B cell receptor transport into lipid raft;0.0326807168829596!GO:0032913;negative regulation of transforming growth factor-beta3 production;0.0326807168829596!GO:0000792;heterochromatin;0.0335589447200517!GO:0003729;mRNA binding;0.0347142908945774!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0347580517170798!GO:0006458;'de novo' protein folding;0.0349407943220728!GO:0051084;'de novo' posttranslational protein folding;0.0349407943220728!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0367840195568009!GO:0042158;lipoprotein biosynthetic process;0.0369217286987913!GO:0008625;induction of apoptosis via death domain receptors;0.0376519885132068!GO:0045792;negative regulation of cell size;0.0376519885132068!GO:0006629;lipid metabolic process;0.0377921888667613!GO:0003682;chromatin binding;0.0379210654042381!GO:0000082;G1/S transition of mitotic cell cycle;0.0380795354180559!GO:0006505;GPI anchor metabolic process;0.0385133196969864!GO:0006417;regulation of translation;0.0388436127704285!GO:0031529;ruffle organization and biogenesis;0.0391210021963877!GO:0046164;alcohol catabolic process;0.0403482237009805!GO:0003746;translation elongation factor activity;0.0403604240988268!GO:0043414;biopolymer methylation;0.0406658665642327!GO:0004721;phosphoprotein phosphatase activity;0.04098610050571!GO:0006096;glycolysis;0.0410145634053187!GO:0006013;mannose metabolic process;0.0412037803156796!GO:0051336;regulation of hydrolase activity;0.041262187420814!GO:0005832;chaperonin-containing T-complex;0.041262187420814!GO:0003678;DNA helicase activity;0.0412688170426248!GO:0005092;GDP-dissociation inhibitor activity;0.0416013927986491!GO:0005637;nuclear inner membrane;0.0419454969856741!GO:0003711;transcription elongation regulator activity;0.0420716997805485!GO:0030308;negative regulation of cell growth;0.0426170642033061!GO:0000123;histone acetyltransferase complex;0.0429763572325257!GO:0051540;metal cluster binding;0.0429763572325257!GO:0051536;iron-sulfur cluster binding;0.0429763572325257!GO:0051539;4 iron, 4 sulfur cluster binding;0.0443600861872544!GO:0008426;protein kinase C inhibitor activity;0.0443600861872544!GO:0030508;thiol-disulfide exchange intermediate activity;0.0443600861872544!GO:0051338;regulation of transferase activity;0.044609062952615!GO:0006338;chromatin remodeling;0.0448145548739338!GO:0009303;rRNA transcription;0.0454216008534039!GO:0044275;cellular carbohydrate catabolic process;0.0457102601976682!GO:0035267;NuA4 histone acetyltransferase complex;0.0463635541830282!GO:0008203;cholesterol metabolic process;0.0466722861835667!GO:0003779;actin binding;0.0467727426998527!GO:0032507;maintenance of cellular protein localization;0.0480073180613981!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0480469137686328!GO:0046870;cadmium ion binding;0.0484825736402749!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0488815166719922!GO:0042982;amyloid precursor protein metabolic process;0.0492252959127365!GO:0046426;negative regulation of JAK-STAT cascade;0.0492534973311083!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0493003298409927!GO:0043022;ribosome binding;0.0494172291411742!GO:0000305;response to oxygen radical;0.0494172291411742!GO:0045334;clathrin-coated endocytic vesicle;0.0494639729092984!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0496896500140487
|sample_id=11516
|sample_id=11516
|sample_note=
|sample_note=
Line 75: Line 104:
|sample_tissue=kidney
|sample_tissue=kidney
|top_motifs=XCPE1{core}:2.05747226137;ZEB1:1.95512620104;MYOD1:1.78303980301;SNAI1..3:1.76024385102;ZNF148:1.51283291733;SP1:1.51125000144;ZNF423:1.43846541217;LHX3,4:1.34461387577;TFCP2:1.31239826431;VSX1,2:1.30251295176;PBX1:1.2980213164;LMO2:1.13991703803;RXRA_VDR{dimer}:1.11620119185;PPARG:1.05940985081;LEF1_TCF7_TCF7L1,2:1.05134188753;GTF2A1,2:1.04331731143;EBF1:1.02583223012;HNF1A:1.01441474706;POU2F1..3:1.00816589948;bHLH_family:0.984761868075;TFAP2{A,C}:0.981922772678;NKX2-3_NKX2-5:0.948115083039;HOX{A5,B5}:0.892949882071;ZIC1..3:0.850332676785;GZF1:0.847953387359;TP53:0.843479296314;RREB1:0.823394130302;ADNP_IRX_SIX_ZHX:0.775229552294;SOX2:0.771214704779;GLI1..3:0.736717939199;TBX4,5:0.733687887062;MTF1:0.674404622159;TEAD1:0.668285656409;ESRRA:0.663580410302;STAT5{A,B}:0.657662229631;NR3C1:0.638146239919;JUN:0.637279820866;HIC1:0.636937758943;TFAP2B:0.632960454198;FOXQ1:0.603412191968;TBP:0.590035029633;GFI1:0.588650378022;HAND1,2:0.561314610194;ONECUT1,2:0.553468775388;SPZ1:0.545219381628;FOSL2:0.502606850719;NR1H4:0.450683816931;ESR1:0.43458277615;NFY{A,B,C}:0.430612907779;NR6A1:0.399211395082;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.378711366215;GFI1B:0.363074795771;PAX1,9:0.33398180275;PAX5:0.329924528223;FOS_FOS{B,L1}_JUN{B,D}:0.329819063016;POU5F1:0.326234196689;TLX1..3_NFIC{dimer}:0.303624148078;MAZ:0.26427071207;RORA:0.240374292539;TFAP4:0.212250809808;TEF:0.212112108376;SOX{8,9,10}:0.212079522587;NFKB1_REL_RELA:0.211278776276;PAX8:0.196746969754;NR5A1,2:0.187343839993;POU3F1..4:0.181230480248;BACH2:0.163333005423;GTF2I:0.153546358871;CRX:0.143949027709;ZBTB6:0.131866335008;EP300:0.12117390169;TFDP1:0.0939855674523;REST:0.0674083293112;HNF4A_NR2F1,2:0.0597463133821;T:0.0544103297912;POU1F1:0.0476592698096;SOX17:0.0388893536384;AR:0.0299552088639;IKZF1:0.0271759883355;NFE2L2:0.0110858464345;FOX{F1,F2,J1}:0.00731753099731;MEF2{A,B,C,D}:-0.00150600760476;NFE2:-0.0046907088222;STAT2,4,6:-0.0137567492015;RXR{A,B,G}:-0.0366573134712;GCM1,2:-0.0387176393756;PRRX1,2:-0.0415713563127;FOXM1:-0.0589695056579;NANOG:-0.0767890609723;SRF:-0.0932427447405;PATZ1:-0.0950428905318;CEBPA,B_DDIT3:-0.0998751808149;E2F1..5:-0.101375265703;OCT4_SOX2{dimer}:-0.115654974709;ZFP161:-0.118122162095;HLF:-0.121042164473;MTE{core}:-0.139187734511;KLF4:-0.150059458751;MED-1{core}:-0.172946101861;TAL1_TCF{3,4,12}:-0.181101409734;NFE2L1:-0.190522334098;ETS1,2:-0.229153012034;RFX1:-0.258507584587;ZNF143:-0.266738306121;GATA6:-0.285246782406;ARID5B:-0.288703382762;MYB:-0.304932280069;NHLH1,2:-0.315010184583;MYBL2:-0.332267923996;PDX1:-0.3573594364;EN1,2:-0.358402256489;XBP1:-0.376132883214;SREBF1,2:-0.377378175224;CUX2:-0.387359545653;ATF2:-0.388121191241;RUNX1..3:-0.393297198201;SMAD1..7,9:-0.401795582288;HMX1:-0.422180159316;HOX{A6,A7,B6,B7}:-0.425065621255;NKX3-1:-0.446514175486;SPIB:-0.46588143882;HES1:-0.484591110727;NKX6-1,2:-0.485557761693;EGR1..3:-0.491648137572;ALX1:-0.498908330171;ZNF384:-0.508402051918;TOPORS:-0.512017922262;FOXL1:-0.522953073294;MZF1:-0.535782160913;UFEwm:-0.548856972792;ATF4:-0.564334158702;IRF7:-0.575562697272;ATF6:-0.584898450184;PRDM1:-0.594298727772;RFX2..5_RFXANK_RFXAP:-0.594370983141;NFIL3:-0.596394449262;DBP:-0.608703909268;FOXA2:-0.623976687121;ZNF238:-0.628707654115;SOX5:-0.631962521506;SPI1:-0.637443103637;CDC5L:-0.640358129325;PITX1..3:-0.646425955382;HBP1_HMGB_SSRP1_UBTF:-0.649858435378;BREu{core}:-0.652045383767;NFATC1..3:-0.695892070161;FOX{D1,D2}:-0.70980890022;ALX4:-0.734508270776;NRF1:-0.748662404067;POU6F1:-0.768439677281;EVI1:-0.787859306462;NKX3-2:-0.789903107255;HOX{A4,D4}:-0.799951747783;TLX2:-0.808530103218;PAX2:-0.812693816882;FOXD3:-0.841782464666;CDX1,2,4:-0.842463921506;ATF5_CREB3:-0.885074925171;PAX6:-0.911019930069;IRF1,2:-0.95093687373;MYFfamily:-0.957787009967;FOXP1:-0.986136578595;ELK1,4_GABP{A,B1}:-0.986498873368;NKX2-2,8:-0.990806157035;YY1:-0.99642863608;HIF1A:-0.998367876091;PAX4:-1.06812186155;CREB1:-1.09347692154;STAT1,3:-1.10241747221;IKZF2:-1.11246307306;FOX{I1,J2}:-1.11757826089;AHR_ARNT_ARNT2:-1.12723082578;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.16064704733;NANOG{mouse}:-1.18166158539;ELF1,2,4:-1.18746235852;PAX3,7:-1.19534740703;NKX2-1,4:-1.19735338828;MAFB:-1.20554111512;FOXO1,3,4:-1.20802124726;TGIF1:-1.22772278315;FOXP3:-1.23321003153;DMAP1_NCOR{1,2}_SMARC:-1.26715776784;HOXA9_MEIS1:-1.27501399475;AIRE:-1.30251423885;BPTF:-1.33513371825;HSF1,2:-1.33837151852;RBPJ:-1.35126165074;FOXN1:-1.37116456707;NFIX:-1.37436692614;HMGA1,2:-1.395141787;ZBTB16:-1.43169930389;GATA4:-1.68961348402
|top_motifs=XCPE1{core}:2.05747226137;ZEB1:1.95512620104;MYOD1:1.78303980301;SNAI1..3:1.76024385102;ZNF148:1.51283291733;SP1:1.51125000144;ZNF423:1.43846541217;LHX3,4:1.34461387577;TFCP2:1.31239826431;VSX1,2:1.30251295176;PBX1:1.2980213164;LMO2:1.13991703803;RXRA_VDR{dimer}:1.11620119185;PPARG:1.05940985081;LEF1_TCF7_TCF7L1,2:1.05134188753;GTF2A1,2:1.04331731143;EBF1:1.02583223012;HNF1A:1.01441474706;POU2F1..3:1.00816589948;bHLH_family:0.984761868075;TFAP2{A,C}:0.981922772678;NKX2-3_NKX2-5:0.948115083039;HOX{A5,B5}:0.892949882071;ZIC1..3:0.850332676785;GZF1:0.847953387359;TP53:0.843479296314;RREB1:0.823394130302;ADNP_IRX_SIX_ZHX:0.775229552294;SOX2:0.771214704779;GLI1..3:0.736717939199;TBX4,5:0.733687887062;MTF1:0.674404622159;TEAD1:0.668285656409;ESRRA:0.663580410302;STAT5{A,B}:0.657662229631;NR3C1:0.638146239919;JUN:0.637279820866;HIC1:0.636937758943;TFAP2B:0.632960454198;FOXQ1:0.603412191968;TBP:0.590035029633;GFI1:0.588650378022;HAND1,2:0.561314610194;ONECUT1,2:0.553468775388;SPZ1:0.545219381628;FOSL2:0.502606850719;NR1H4:0.450683816931;ESR1:0.43458277615;NFY{A,B,C}:0.430612907779;NR6A1:0.399211395082;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.378711366215;GFI1B:0.363074795771;PAX1,9:0.33398180275;PAX5:0.329924528223;FOS_FOS{B,L1}_JUN{B,D}:0.329819063016;POU5F1:0.326234196689;TLX1..3_NFIC{dimer}:0.303624148078;MAZ:0.26427071207;RORA:0.240374292539;TFAP4:0.212250809808;TEF:0.212112108376;SOX{8,9,10}:0.212079522587;NFKB1_REL_RELA:0.211278776276;PAX8:0.196746969754;NR5A1,2:0.187343839993;POU3F1..4:0.181230480248;BACH2:0.163333005423;GTF2I:0.153546358871;CRX:0.143949027709;ZBTB6:0.131866335008;EP300:0.12117390169;TFDP1:0.0939855674523;REST:0.0674083293112;HNF4A_NR2F1,2:0.0597463133821;T:0.0544103297912;POU1F1:0.0476592698096;SOX17:0.0388893536384;AR:0.0299552088639;IKZF1:0.0271759883355;NFE2L2:0.0110858464345;FOX{F1,F2,J1}:0.00731753099731;MEF2{A,B,C,D}:-0.00150600760476;NFE2:-0.0046907088222;STAT2,4,6:-0.0137567492015;RXR{A,B,G}:-0.0366573134712;GCM1,2:-0.0387176393756;PRRX1,2:-0.0415713563127;FOXM1:-0.0589695056579;NANOG:-0.0767890609723;SRF:-0.0932427447405;PATZ1:-0.0950428905318;CEBPA,B_DDIT3:-0.0998751808149;E2F1..5:-0.101375265703;OCT4_SOX2{dimer}:-0.115654974709;ZFP161:-0.118122162095;HLF:-0.121042164473;MTE{core}:-0.139187734511;KLF4:-0.150059458751;MED-1{core}:-0.172946101861;TAL1_TCF{3,4,12}:-0.181101409734;NFE2L1:-0.190522334098;ETS1,2:-0.229153012034;RFX1:-0.258507584587;ZNF143:-0.266738306121;GATA6:-0.285246782406;ARID5B:-0.288703382762;MYB:-0.304932280069;NHLH1,2:-0.315010184583;MYBL2:-0.332267923996;PDX1:-0.3573594364;EN1,2:-0.358402256489;XBP1:-0.376132883214;SREBF1,2:-0.377378175224;CUX2:-0.387359545653;ATF2:-0.388121191241;RUNX1..3:-0.393297198201;SMAD1..7,9:-0.401795582288;HMX1:-0.422180159316;HOX{A6,A7,B6,B7}:-0.425065621255;NKX3-1:-0.446514175486;SPIB:-0.46588143882;HES1:-0.484591110727;NKX6-1,2:-0.485557761693;EGR1..3:-0.491648137572;ALX1:-0.498908330171;ZNF384:-0.508402051918;TOPORS:-0.512017922262;FOXL1:-0.522953073294;MZF1:-0.535782160913;UFEwm:-0.548856972792;ATF4:-0.564334158702;IRF7:-0.575562697272;ATF6:-0.584898450184;PRDM1:-0.594298727772;RFX2..5_RFXANK_RFXAP:-0.594370983141;NFIL3:-0.596394449262;DBP:-0.608703909268;FOXA2:-0.623976687121;ZNF238:-0.628707654115;SOX5:-0.631962521506;SPI1:-0.637443103637;CDC5L:-0.640358129325;PITX1..3:-0.646425955382;HBP1_HMGB_SSRP1_UBTF:-0.649858435378;BREu{core}:-0.652045383767;NFATC1..3:-0.695892070161;FOX{D1,D2}:-0.70980890022;ALX4:-0.734508270776;NRF1:-0.748662404067;POU6F1:-0.768439677281;EVI1:-0.787859306462;NKX3-2:-0.789903107255;HOX{A4,D4}:-0.799951747783;TLX2:-0.808530103218;PAX2:-0.812693816882;FOXD3:-0.841782464666;CDX1,2,4:-0.842463921506;ATF5_CREB3:-0.885074925171;PAX6:-0.911019930069;IRF1,2:-0.95093687373;MYFfamily:-0.957787009967;FOXP1:-0.986136578595;ELK1,4_GABP{A,B1}:-0.986498873368;NKX2-2,8:-0.990806157035;YY1:-0.99642863608;HIF1A:-0.998367876091;PAX4:-1.06812186155;CREB1:-1.09347692154;STAT1,3:-1.10241747221;IKZF2:-1.11246307306;FOX{I1,J2}:-1.11757826089;AHR_ARNT_ARNT2:-1.12723082578;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.16064704733;NANOG{mouse}:-1.18166158539;ELF1,2,4:-1.18746235852;PAX3,7:-1.19534740703;NKX2-1,4:-1.19735338828;MAFB:-1.20554111512;FOXO1,3,4:-1.20802124726;TGIF1:-1.22772278315;FOXP3:-1.23321003153;DMAP1_NCOR{1,2}_SMARC:-1.26715776784;HOXA9_MEIS1:-1.27501399475;AIRE:-1.30251423885;BPTF:-1.33513371825;HSF1,2:-1.33837151852;RBPJ:-1.35126165074;FOXN1:-1.37116456707;NFIX:-1.37436692614;HMGA1,2:-1.395141787;ZBTB16:-1.43169930389;GATA4:-1.68961348402
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11516-119H4;search_select_hide=table117:FF:11516-119H4
}}
}}

Latest revision as of 18:05, 4 June 2020

Name:Renal Cortical Epithelial Cells, donor1
Species:Human (Homo sapiens)
Library ID:CNhs11331
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuekidney
dev stageNA
sexNA
ageNA
cell typeepithelial cell of kidney, renal cortex
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberSC4115
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005247
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11331 CAGE DRX008425 DRR009297
Accession ID Hg19

Library idBAMCTSS
CNhs11331 DRZ000722 DRZ002107
Accession ID Hg38

Library idBAMCTSS
CNhs11331 DRZ012072 DRZ013457
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005247
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10002.GATCAG sRNA-Seq DRX036996 DRR041362
Accession ID Hg19

Library idBAMCTSS
SRhi10002.GATCAG DRZ007004


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.12
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.0173
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0651
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.4
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.145
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0914
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0441
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.513
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.216
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.4
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.113
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11331

Jaspar motifP-value
MA0002.20.644
MA0003.10.404
MA0004.10.463
MA0006.10.101
MA0007.10.117
MA0009.10.216
MA0014.10.492
MA0017.10.0514
MA0018.20.916
MA0019.10.185
MA0024.10.851
MA0025.10.574
MA0027.10.667
MA0028.10.0135
MA0029.10.311
MA0030.10.31
MA0031.10.431
MA0035.20.024
MA0038.10.0184
MA0039.20.0313
MA0040.10.509
MA0041.10.303
MA0042.10.994
MA0043.10.382
MA0046.11.00953e-14
MA0047.20.828
MA0048.10.597
MA0050.12.82159e-4
MA0051.10.0507
MA0052.10.0771
MA0055.10.0572
MA0057.10.192
MA0058.10.507
MA0059.10.881
MA0060.14.62066e-7
MA0061.10.42
MA0062.24.74569e-5
MA0065.20.0538
MA0066.10.696
MA0067.10.138
MA0068.10.663
MA0069.10.51
MA0070.10.0153
MA0071.10.716
MA0072.10.788
MA0073.10.948
MA0074.10.886
MA0076.11.07352e-4
MA0077.10.00966
MA0078.10.613
MA0079.20.46
MA0080.20.00759
MA0081.10.0586
MA0083.10.0269
MA0084.10.16
MA0087.10.833
MA0088.10.698
MA0090.10.00242
MA0091.10.682
MA0092.10.905
MA0093.10.469
MA0099.24.85919e-8
MA0100.10.23
MA0101.10.148
MA0102.20.0551
MA0103.13.27664e-7
MA0104.20.601
MA0105.10.688
MA0106.10.087
MA0107.10.0427
MA0108.23.28222e-8
MA0111.10.253
MA0112.20.387
MA0113.10.821
MA0114.10.101
MA0115.10.51
MA0116.10.57
MA0117.10.158
MA0119.10.794
MA0122.10.388
MA0124.10.495
MA0125.10.227
MA0131.10.108
MA0135.10.164
MA0136.10.00351
MA0137.20.17
MA0138.20.79
MA0139.10.696
MA0140.10.306
MA0141.10.564
MA0142.10.869
MA0143.10.667
MA0144.10.979
MA0145.10.0544
MA0146.10.119
MA0147.10.641
MA0148.10.552
MA0149.10.261
MA0150.10.902
MA0152.10.0472
MA0153.14.2556e-8
MA0154.10.372
MA0155.10.11
MA0156.10.00801
MA0157.10.122
MA0159.10.315
MA0160.10.358
MA0162.10.106
MA0163.10.296
MA0164.10.651
MA0258.10.681
MA0259.10.234



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11331

Novel motifP-value
10.587
100.0666
1000.813
1010.0554
1020.493
1030.468
1040.58
1050.0708
1060.0829
1070.0148
1080.493
1090.217
110.663
1100.681
1110.993
1120.808
1130.442
1140.095
1150.958
1160.846
1170.427
1180.988
1190.168
120.76
1200.541
1210.959
1220.155
1230.0841
1240.241
1250.419
1260.275
1270.279
1280.196
1290.0194
130.381
1300.492
1310.423
1320.18
1330.147
1340.668
1350.788
1360.757
1370.0402
1380.278
1390.104
140.517
1400.284
1410.53
1420.787
1430.886
1440.471
1450.202
1460.0191
1470.582
1480.0991
1490.191
150.965
1500.448
1510.623
1520.0488
1530.202
1540.165
1550.945
1560.0552
1570.253
1580.929
1590.787
160.415
1600.124
1610.802
1620.156
1630.787
1640.205
1650.235
1660.567
1670.122
1680.93
1690.242
170.288
180.454
190.669
20.207
200.816
210.779
220.295
230.219
240.968
250.614
260.389
270.303
280.614
290.601
30.462
300.0338
310.431
320.495
330.214
340.233
350.161
360.902
370.671
380.399
390.205
40.124
400.00778
410.505
420.579
430.834
440.868
450.0817
460.675
470.977
480.779
490.984
50.521
500.243
510.491
520.316
530.569
540.417
550.134
560.313
570.94
580.395
590.114
60.218
600.403
610.366
620.247
630.301
640.549
650.0808
660.108
670.261
680.849
690.0428
70.984
700.958
710.249
720.809
730.0753
740.171
750.686
760.0708
770.00643
780.735
790.426
80.627
800.747
810.144
820.373
830.948
840.768
850.851
860.577
870.187
880.552
890.264
90.594
900.0315
910.895
920.707
930.253
940.677
950.63
960.795
970.691
980.783
990.0186



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11331


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
1000497 (kidney cell)
0002518 (kidney epithelial cell)
0002681 (kidney cortical cell)
1000449 (epithelial cell of nephron)
1000507 (kidney tubule cell)
0002584 (renal cortical epithelial cell)
1000494 (nephron tubule epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002113 (kidney)
0002100 (trunk)
0000483 (epithelium)
0001851 (cortex)
0000479 (tissue)
0000064 (organ part)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0006555 (excretory tube)
0006554 (urinary system structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003103 (compound organ)
0009569 (subdivision of trunk)
0004211 (nephron epithelium)
0009773 (renal tubule)
0000489 (cavitated compound organ)
0000353 (parenchyma)
0005177 (trunk region element)
0005172 (abdomen element)
0001231 (nephron tubule)
0004819 (kidney epithelium)
0005173 (abdominal segment element)
0004810 (nephron tubule epithelium)
0001285 (nephron)
0001225 (cortex of kidney)
0011143 (upper urinary tract)
0001008 (renal system)
0002417 (abdominal segment of trunk)
0008987 (renal parenchyma)
0007684 (uriniferous tubule)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000151 (human renal epithelial cell sample)
0000152 (human renal cortical epithelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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