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{{f5samples
{{f5samples
|F5samples=
|DRA_sample_Accession=CAGE@SAMD00005006
|ancestors_in_anatomy_facet=UBERON:0000015,UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0000949,UBERON:0001007,UBERON:0001041,UBERON:0001048,UBERON:0001062,UBERON:0001555,UBERON:0002050,UBERON:0002100,UBERON:0002107,UBERON:0002330,UBERON:0002365,UBERON:0002368,UBERON:0002405,UBERON:0002417,UBERON:0002423,UBERON:0002530,UBERON:0002532,UBERON:0003104,UBERON:0003894,UBERON:0004119,UBERON:0004120,UBERON:0004161,UBERON:0004185,UBERON:0004921,UBERON:0005057,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005256,UBERON:0005423,UBERON:0006235,UBERON:0006925,UBERON:0007026,UBERON:0008835,UBERON:0008836,UBERON:0009142
|accession_numbers=CAGE;DRX007908;DRR008780;DRZ000205;DRZ001590;DRZ011555;DRZ012940
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000255,CL:0000548
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002107,UBERON:0002100,UBERON:0001007,UBERON:0004119,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002368,UBERON:0005177,UBERON:0002365,UBERON:0005172,UBERON:0006925,UBERON:0002530,UBERON:0010317,UBERON:0005173,UBERON:0002417,UBERON:0000949,UBERON:0002330,UBERON:0000916,UBERON:0002423
|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:305,DOID:4,DOID:7
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000181,CL:0000417,CL:0000668,CL:0000412,CL:0000255,CL:0000182
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:7,DOID:305
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0100224,FF:0100578
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr1:201979743..201979762,+!p1@ELF3!2.07!116.44!ELF3;;chr12:100867627..100867652,+!p1@NR1H4!2.00!98.13!NR1H4;;chr1:197886461..197886558,+!p1@LHX9!1.96!90.95!LHX9;;chr1:201979703..201979721,+!p2@ELF3!1.92!81.79!ELF3;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.90!78.64!SEBOX;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!1.84!67.72!SEBOX;;chr12:100867653..100867677,+!p2@NR1H4!1.83!67.03!NR1H4;;chr11:61520075..61520136,+!p1@C11orf9!1.75!113.29!C11orf9;;chr7:73038839..73038862,-!p1@MLXIPL!1.71!50.49!MLXIPL;;chr3:12330560..12330579,+!p1@PPARG!1.66!50.99!PPARG;;chr17:41622765..41622821,-!p2@ETV4!1.56!52.86!ETV4;;chr20:22564895..22564910,-!p1@FOXA2!1.46!27.76!FOXA2;;chr17:41622731..41622764,-!p5@ETV4!1.44!26.38!ETV4;;chr18:55102628..55102646,+!p2@ONECUT2!1.43!25.79!ONECUT2;;chrX:30327504..30327509,-!p1@NR0B1!1.42!25.59!NR0B1;;chr19:50432453..50432468,+!p1@ATF5!1.40!1284.38!ATF5;;chr8:76319876..76319926,+!p1@HNF4G!1.38!23.03!HNF4G;;chr19:33793430..33793447,-!p1@CEBPA!1.37!91.44!CEBPA;;chr18:55102598..55102623,+!p1@ONECUT2!1.37!22.34!ONECUT2;;chr3:193853927..193853944,+!p1@HES1!1.35!668.72!HES1;;chr1:119530493..119530572,-!p1@TBX15!1.34!20.87!TBX15;;chr2:176969228..176969260,+!p1@HOXD11!1.34!20.67!HOXD11;;chr14:38064429..38064486,-!p1@FOXA1!1.33!20.37!FOXA1;;chr1:199996733..199996781,+!p1@NR5A2!1.29!18.60!NR5A2;;chr17:46703687..46703740,-!p1@HOXB9!1.28!17.91!HOXB9;;chr15:53082521..53082549,-!p1@ONECUT1!1.26!17.22!ONECUT1;;chr17:46682321..46682362,-!p1@HOXB6!1.25!16.83!HOXB6;;chr8:11561684..11561751,+!p1@GATA4!1.25!16.63!GATA4;;chr1:214161272..214161322,+!p1@PROX1!1.22!22.15!PROX1;;chr1:27240455..27240474,-!p1@NR0B2!1.22!15.65!NR0B2;;chr10:94449703..94449718,+!p1@HHEX!1.15!50.49!HHEX;;chr17:26697257..26697268,-!p3@SEBOX,p3@VTN!1.12!12.21!SEBOX;;chr19:19281060..19281078,-!p2@MEF2BNB-MEF2B,p2@MEF2B!1.11!11.91!MEF2B;;chr11:16419037..16419064,-!p3@SOX6!1.10!11.71!SOX6;;chr7:156803329..156803362,-!p1@MNX1!1.10!11.52!MNX1;;chr5:92918919..92918942,+!p1@NR2F1!1.09!50.99!NR2F1;;chr5:134369905..134369972,-!p1@PITX1!1.09!17.32!PITX1;;chr17:41622925..41622976,-!p3@ETV4!1.09!16.93!ETV4;;chr15:37392094..37392116,-!p6@MEIS2!1.09!14.08!MEIS2;;chr11:31832658..31832681,-!p1@PAX6!1.03!9.65!PAX6;;chr6:1312325..1312340,+!p1@FOXQ1!1.02!15.55!FOXQ1;;chr1:199996702..199996732,+!p5@NR5A2!1.02!9.45!NR5A2;;chr17:41623692..41623715,-!p1@ETV4!1.00!39.17!ETV4;;chr3:12329397..12329433,+!p2@PPARG!1.00!20.87!PPARG;;chr11:34663913..34663945,+!p6@EHF!1.00!8.96!EHF;;chr3:157823517..157823562,-!p1@SHOX2!0.99!9.45!SHOX2;;chr3:69915369..69915381,+!p4@MITF!0.99!8.86!MITF;;chr2:45236540..45236577,-!p1@SIX2!0.99!8.76!SIX2;;chr6:134210243..134210257,+!p1@TCF21!0.99!8.76!TCF21;;chr17:53342311..53342400,+!p1@HLF!0.98!9.84!HLF;;chr11:34664014..34664045,+!p4@EHF!0.97!8.27!EHF;;chr6:126240380..126240430,+!p2@NCOA7!0.96!21.85!NCOA7;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.96!8.07!HOXC5;;chr3:69915385..69915438,+!p3@MITF!0.95!7.97!MITF;;chr19:45971246..45971265,+!p1@FOSB!0.94!148.72!FOSB;;chr12:80084737..80084763,-!p3@PAWR!0.94!29.92!PAWR;;chr2:239148671..239148686,-!p1@HES6!0.93!28.74!HES6;;chr13:100634031..100634045,+!p1@ZIC2!0.93!7.58!ZIC2;;chr16:52581025..52581072,-!p1@TOX3!0.93!7.48!TOX3;;chr17:36105042..36105060,-!p1@HNF1B!0.92!7.38!HNF1B;;chr18:19749541..19749557,+!p1@GATA6!0.91!23.23!GATA6;;chr19:33865223..33865254,+!p5@CEBPG!0.91!7.19!CEBPG;;chr20:42984330..42984364,+!p2@HNF4A!0.91!7.19!HNF4A;;chr5:134369879..134369898,-!p2@PITX1!0.91!7.09!PITX1;;chr12:121416455..121416479,+!p2@HNF1A!0.91!7.09!HNF1A;;chr9:4300050..4300118,-!p1@GLIS3!0.88!45.57!GLIS3;;chr17:41623259..41623278,-!p7@ETV4!0.88!7.78!ETV4;;chr2:176969179..176969226,+!p2@HOXD11!0.88!6.59!HOXD11;;chr17:46692457..46692484,-!p2@HOXB8!0.87!6.50!HOXB8;;chr1:212782094..212782109,+!p1@ATF3!0.86!182.19!ATF3;;chr9:20621927..20621996,-!p3@MLLT3!0.86!10.93!MLLT3;;chr7:155250249..155250278,+!p@chr7:155250249..155250278,+!0.85!6.00!EN2;;chr5:76383070..76383117,-!p3@ZBED3!0.84!12.50!ZBED3;;chr8:123793988..123794016,+!p1@ZHX2!0.84!10.93!ZHX2;;chr14:37131058..37131139,+!p1@PAX9!0.84!5.91!PAX9;;chr12:54378923..54378966,+!p1@HOXC10!0.83!5.71!HOXC10;;chr16:52580953..52580992,-!p2@TOX3!0.83!5.71!TOX3;;chr15:76629123..76629151,+!p1@ISL2!0.81!6.10!ISL2;;chr1:214161358..214161377,+!p3@PROX1!0.81!5.41!PROX1;;chr19:33864600..33864732,+!p1@CEBPG!0.80!163.09!CEBPG;;chr3:169381420..169381535,-!p1@MECOM!0.80!6.40!MECOM;;chr12:100867736..100867750,+!p4@NR1H4!0.80!5.32!NR1H4;;chr8:60031682..60031710,-!p2@TOX!0.79!8.66!TOX;;chr17:79881332..79881348,-!p3@MAFG!0.79!7.78!MAFG;;chr8:80679993..80680011,-!p1@HEY1!0.79!7.68!HEY1;;chr1:200011711..200011752,+!p3@NR5A2!0.79!5.22!NR5A2;;chr19:46367576..46367592,+!p1@FOXA3!0.79!5.12!FOXA3;;chr12:121416489..121416503,+!p4@HNF1A!0.79!5.12!HNF1A;;chr5:92918894..92918912,+!p2@NR2F1!0.78!17.91!NR2F1;;chr13:100634130..100634143,+!p3@ZIC2!0.78!5.02!ZIC2;;chr4:149363475..149363492,-!p2@NR3C2!0.78!5.02!NR3C2;;chr9:22447422..22447483,+!p1@DMRTA1!0.78!5.02!DMRTA1;;chr5:158526917..158526932,-!p1@EBF1!0.77!12.89!EBF1;;chr9:1050331..1050363,+!p1@DMRT2!0.77!4.92!DMRT2;;chr12:54393880..54393962,+!p1@HOXC9!0.77!4.92!HOXC9;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.77!4.82!HOXC5;;chr19:4153613..4153652,+!p1@CREB3L3!0.77!4.82!CREB3L3;;chr5:76383133..76383186,-!p2@ZBED3!0.76!10.43!ZBED3;;chr19:50435736..50435781,+!p3@ATF5!0.76!6.79!ATF5;;chr12:54380404..54380433,+!p3@HOXC10!0.76!4.72!HOXC10;;chr1:204042233..204042249,+!p1@SOX13!0.75!32.19!SOX13;;chr6:126102292..126102329,+!p3@NCOA7!0.75!16.73!NCOA7;;chr1:61547894..61547968,+!p2@NFIA!0.75!14.47!NFIA;;chr1:164528687..164528711,+!p6@PBX1!0.75!5.51!PBX1;;chr13:100623375..100623425,-!p1@ZIC5!0.75!4.63!ZIC5;;chr3:12329358..12329393,+!p3@PPARG!0.74!11.91!PPARG;;chr3:114343826..114343869,-!p4@ZBTB20!0.74!9.55!ZBTB20;;chr7:27219833..27219845,-!p7@HOXA10!0.74!4.53!HOXA10;;chr7:27192185..27192209,-!p1@HOXA3!0.73!4.43!HOXA3;;chr2:177001290..177001315,+!p1@HOXD3!0.73!4.33!HOXD3;;chr4:149363494..149363543,-!p1@NR3C2!0.73!4.33!NR3C2;;chr2:172967621..172967637,-!p1@DLX2!0.72!12.50!DLX2;;chr12:57914286..57914304,-!p1@DDIT3!0.71!170.87!DDIT3;;chr5:72744594..72744609,-!p1@FOXD1!0.71!21.16!FOXD1;;chr8:60031619..60031676,-!p1@TOX!0.71!9.55!TOX;;chr2:71127699..71127744,+!p1@VAX2!0.71!9.06!VAX2;;chr6:126070769..126070801,+!p1@HEY2!0.71!4.92!HEY2;;chr12:100867695..100867706,+!p6@NR1H4!0.71!4.13!NR1H4;;chr3:114343768..114343822,-!p1@ZBTB20!0.70!19.78!ZBTB20;;chr2:122042770..122042785,-!p1@TFCP2L1!0.70!4.04!TFCP2L1;;chr1:119530636..119530653,-!p2@TBX15!0.70!4.04!TBX15;;chr12:100867777..100867788,+!p5@NR1H4!0.70!4.04!NR1H4;;chr7:17338266..17338282,+!p1@AHR!0.69!47.93!AHR;;chr9:14314131..14314147,-!p2@NFIB!0.69!24.51!NFIB;;chr19:53360870..53360873,-!p1@ZNF468!0.69!16.04!ZNF468;;chr20:51588873..51588953,+!p1@TSHZ2!0.69!5.32!TSHZ2;;chr8:86089417..86089440,+!p2@E2F5!0.68!8.27!E2F5;;chr9:4299959..4299974,-!p4@GLIS3!0.68!6.50!GLIS3;;chr17:41277372..41277418,-!p1@BRCA1!0.67!15.06!BRCA1;;chr1:214161328..214161348,+!p2@PROX1!0.67!3.64!PROX1;;chr7:27196267..27196311,-!p1@HOXA7!0.67!3.64!HOXA7;;chr13:73633131..73633149,+!p1@KLF5!0.66!44.19!KLF5;;chr12:26277956..26277980,-!p1@BHLHE41!0.66!14.57!BHLHE41;;chr7:28448965..28448994,+!p2@CREB5!0.66!14.27!CREB5;;chr8:123793860..123793921,+!p2@ZHX2!0.66!11.02!ZHX2;;chr17:41622834..41622883,-!p6@ETV4!0.66!4.53!ETV4;;chr17:46690839..46690884,-!p1@HOXB8!0.66!3.54!HOXB8;;chr17:46687959..46688007,-!p2@HOXB7!0.65!5.02!HOXB7;;chr17:36105074..36105086,-!p2@HNF1B!0.65!3.44!HNF1B;;chr6:126102254..126102289,+!p5@NCOA7!0.64!10.53!NCOA7;;chr13:72441315..72441454,-!p1@DACH1!0.64!7.48!DACH1;;chr20:6748325..6748352,+!p1@BMP2!0.64!5.12!BMP2;;chr6:126240442..126240459,+!p4@NCOA7!0.64!4.43!NCOA7;;chr7:27153454..27153469,-!p2@HOXA3!0.64!3.35!HOXA3;;chr17:46703212..46703238,-!p2@HOXB9!0.64!3.35!HOXB9;;chr13:79177703..79177729,-!p2@POU4F1!0.64!3.35!POU4F1;;chr7:14028743..14028799,-!p3@ETV1!0.63!4.33!ETV1;;chr3:157824001..157824078,-!p2@SHOX2!0.63!3.25!SHOX2;;chr1:200008734..200008765,+!p2@NR5A2!0.63!3.25!NR5A2;;chr12:124457746..124457828,+!p1@ZNF664!0.62!144.98!ZNF664;;chrX:84499081..84499115,+!p2@ZNF711!0.62!5.02!ZNF711;;chr12:100897130..100897149,+!p3@NR1H4!0.62!3.15!NR1H4;;chr13:100638100..100638115,+!p4@ZIC2!0.62!3.15!ZIC2;;chr19:33865166..33865182,+!p7@CEBPG!0.62!3.15!CEBPG;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.61!36.62!GLIS2;;chr19:37019136..37019178,-!p1@ZNF260!0.61!29.92!ZNF260;;chr7:17338324..17338341,+!p3@AHR!0.61!12.11!AHR;;chr18:19749517..19749531,+!p3@GATA6!0.61!6.10!GATA6;;chr17:46688334..46688385,-!p1@HOXB7!0.61!4.72!HOXB7;;chr1:47903709..47903764,+!p1@BC169308!0.61!3.54!FOXD2;;chr20:22565185..22565223,-!p3@FOXA2!0.61!3.05!FOXA2;;chr21:38071430..38071456,+!p1@SIM2!0.61!3.05!SIM2;;chr2:119605214..119605230,-!p1@EN1!0.61!3.05!EN1;;chr6:41514078..41514158,+!p1@FOXP4!0.60!32.68!FOXP4;;chr8:146228270..146228295,-!p1@ZNF252!0.60!19.88!ZNF252P;;chr19:59084872..59084920,-!p2@MZF1!0.60!9.15!MZF1;;chr12:54447599..54447630,+!p3@HOXC4!0.60!3.84!HOXC4;;chr17:41623667..41623682,-!p8@ETV4!0.60!3.25!ETV4;;chr18:55102806..55102847,+!p3@ONECUT2!0.60!2.95!ONECUT2;;chr11:31832610..31832639,-!p5@PAX6!0.60!2.95!PAX6;;chr4:149366111..149366128,-!p7@NR3C2!0.60!2.95!NR3C2;;chr1:61548225..61548299,+!p1@NFIA!0.59!45.97!NFIA;;chr10:94449675..94449694,+!p2@HHEX!0.59!8.96!HHEX;;chr5:158526459..158526481,-!p2@EBF1!0.59!4.13!EBF1;;chr10:31288398..31288455,-!p2@ZNF438!0.59!3.54!ZNF438;;chr7:14028488..14028516,-!p2@ETV1!0.59!3.25!ETV1;;chr14:38064590..38064606,-!p2@FOXA1!0.59!2.85!FOXA1;;chr1:2985760..2985774,+!p1@PRDM16!0.59!2.85!PRDM16;;chr8:103667935..103667960,-!p1@KLF10!0.58!154.63!KLF10;;chr15:37392616..37392638,-!p2@MEIS2!0.58!10.24!MEIS2;;chr19:57791328..57791377,+!p2@ZNF460!0.57!40.85!ZNF460;;chr10:114710098..114710130,+!p2@TCF7L2!0.57!25.10!TCF7L2;;chr12:121416340..121416360,+!p1@HNF1A!0.57!2.76!HNF1A;;chr17:79881433..79881452,-!p6@MAFG!0.57!2.76!MAFG;;chr17:70117153..70117174,+!p1@SOX9!0.56!33.47!SOX9;;chr19:44952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3.74!ZNF235;;chr19:53868940..53868990,+!p1@ZNF525,p2@ZNF765!0.22!3.54!ZNF525;;chr2:19558373..19558392,-!p1@OSR1!0.22!3.35!OSR1;;chr15:100106244..100106259,+!p2@MEF2A!0.22!2.76!MEF2A;;chr7:1570388..1570418,+!p2@MAFK!0.22!2.46!MAFK;;chr6:26659967..26659982,-!p1@ZNF322P1,p1@ZNF322!0.22!2.36!ZNF322;;chr1:23696308..23696339,-!p2@ZNF436!0.22!2.36!ZNF436;;chr11:63684602..63684664,-!p1@RCOR2!0.22!2.17!RCOR2;;chr19:55987998..55988026,+!p2@ZNF628!0.22!1.97!ZNF628;;chr19:21265028..21265052,+!p2@ZNF714!0.22!1.87!ZNF714;;chr10:114711019..114711041,+!p7@TCF7L2!0.22!1.48!TCF7L2;;chr8:145159277..145159282,+!p7@MAF1!0.22!1.48!MAF1;;chr19:37708814..37708838,+!p2@ZNF383!0.22!1.38!ZNF383;;chr9:99180662..99180690,-!p2@ZNF367!0.22!1.28!ZNF367;;chr20:306221..306232,+!p4@SOX12!0.22!1.18!SOX12;;chr6:45390077..45390105,+!p9@RUNX2!0.22!1.08!RUNX2;;chr12:66218003..66218018,+!p9@HMGA2!0.22!0.98!HMGA2;;chr2:25565329..25565342,-!p6@DNMT3A!0.22!0.89!DNMT3A;;chr19:47422934..47422958,+!p4@ARHGAP35!0.22!0.89!ARHGAP35;;chr11:62369291..62369351,-!p1@MTA2!0.21!26.87!MTA2;;chr20:33413416..33413466,-!p1@NCOA6!0.21!17.13!NCOA6;;chr3:179040767..179040866,+!p1@ZNF639!0.21!14.67!ZNF639;;chr7:64838754..64838778,+!p1@ZNF92!0.21!13.39!ZNF92;;chr12:133532864..133532899,-!p1@ZNF605!0.21!10.24!ZNF605;;chr12:27485785..27485816,+!p1@ARNTL2!0.21!9.45!ARNTL2;;chr4:87928413..87928433,+!p3@AFF1!0.21!8.37!AFF1;;chr19:57831829..57831890,+!p1@ZNF543!0.21!8.37!ZNF543;;chr2:178257401..178257432,-!p4@NFE2L2!0.21!7.58!NFE2L2;;chr12:57400261..57400344,-!p1@ZBTB39!0.21!6.20!ZBTB39;;chr19:44617538..44617598,+!p1@ZNF225!0.21!5.02!ZNF225;;chrX:46404811..46404869,-!p1@ZNF674!0.21!4.72!ZNF674;;chr9:115818951..115819011,-!p1@ZFP37!0.21!3.74!ZFP37;;chr19:36545291..36545314,-!p2@THAP8!0.21!2.85!THAP8;;chr19:37341160..37341194,-!p2@ZNF790!0.21!2.36!ZNF790;;chr3:23986748..23986761,+!p3@NR1D2!0.21!2.36!NR1D2;;chr12:122516678..122516687,+!p3@MLXIP!0.21!1.97!MLXIP;;chr19:44598560..44598576,+!p3@ZNF224!0.21!1.57!ZNF224;;chr2:74730430..74730451,-!p1@LBX2!0.21!1.57!LBX2;;chr6:43337124..43337144,-!p4@ZNF318!0.21!1.28!ZNF318;;chr19:58987786..58987805,+!p3@ZNF446!0.21!1.28!ZNF446;;chr18:19749386..19749404,+!p2@GATA6!0.21!1.28!GATA6;;chr14:21566540..21566580,-!p2@ZNF219!0.21!1.18!ZNF219;;chr12:80083807..80083859,-!p11@PAWR!0.21!0.98!PAWR;;chr7:14029312..14029325,-!p4@ETV1!0.21!0.98!ETV1;;chr8:81397846..81397860,+!p3@ZBTB10!0.21!0.98!ZBTB10;;chr10:44144240..44144252,-!p4@ZNF32!0.21!0.89!ZNF32;;chr15:76629097..76629120,+!p2@ISL2!0.21!0.79!ISL2;;chr6:21594252..21594285,+!p11@SOX4!0.21!0.79!SOX4;;chr1:151319283..151319314,-!p4@RFX5!0.21!0.79!RFX5;;chr1:38512457..38512474,-!p1@POU3F1!0.21!0.79!POU3F1;;chr8:102217817..102217936,-!p1@ZNF706!0.20!67.32!ZNF706;;chr2:169312725..169312810,+!p1@CERS6!0.20!34.35!CERS6;;chr3:23986762..23986821,+!p1@NR1D2!0.20!21.75!NR1D2;;chr10:38299546..38299686,+!p1@ZNF33A!0.20!20.18!ZNF33A;;chr16:3355472..3355514,+!p1@ZNF75A!0.20!19.59!ZNF75A;;chr19:42580274..42580375,+!p1@ZNF574!0.20!15.85!ZNF574;;chr11:13299319..13299424,+!p1@ARNTL!0.20!13.78!ARNTL;;chr3:141868293..141868355,-!p2@TFDP2!0.20!11.81!TFDP2;;chr12:19592405..19592492,+!p2@AEBP2!0.20!11.61!AEBP2;;chr19:56879653..56879743,+!p1@ZNF542!0.20!9.94!ZNF542;;chr15:50647370..50647405,-!p2@GABPB1!0.20!7.09!GABPB1;;chr20:42543441..42543497,+!p1@TOX2!0.20!5.71!TOX2;;chr5:178157651..178157689,-!p1@ZNF354A!0.20!5.22!ZNF354A;;chr19:9785724..9785740,-!p2@ZNF562!0.20!4.92!ZNF562;;chr3:101395936..101395962,-!p2@ZBTB11!0.20!4.92!ZBTB11;;chr11:65667884..65667895,-!p2@FOSL1!0.20!4.82!FOSL1;;chr2:242576641..242576731,-!p2@THAP4!0.20!4.72!THAP4;;chr17:38498402..38498445,+!p3@RARA!0.20!4.43!RARA;;chr19:22034809..22034878,-!p2@ZNF43!0.20!4.33!ZNF43;;chr19:44598534..44598559,+!p2@ZNF224!0.20!3.64!ZNF224;;chr19:4067039..4067064,-!p3@ZBTB7A!0.20!3.44!ZBTB7A;;
|ffid_belonging_in_development=CL:0000134,CL:0000223,UBERON:0001041,UBERON:0002532,UBERON:0006595,UBERON:0003104,UBERON:0004161,UBERON:0009497,UBERON:0010316
|fonse_cell_line=FF:0100224,FF:0101120
|fonse_cell_line=FF:0100224,FF:0101120
|fonse_cell_line_closure=FF:0100224,FF:0101120
|fonse_cell_line_closure=FF:0100224,FF:0101120
Line 35: Line 41:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/hepatoma%2520cell%2520line%253aLi-7.CNhs11271.10484-107A7.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/hepatoma%2520cell%2520line%253aLi-7.CNhs11271.10484-107A7.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/hepatoma%2520cell%2520line%253aLi-7.CNhs11271.10484-107A7.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/hepatoma%2520cell%2520line%253aLi-7.CNhs11271.10484-107A7.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/hepatoma%2520cell%2520line%253aLi-7.CNhs11271.10484-107A7.hg38.nobarcode.ctss.bed.gz
|id=FF:10484-107A7
|id=FF:10484-107A7
|is_a=EFO:0002091;;FF:0000003;;FF:0000210;;FF:0100578
|is_a=EFO:0002091;;FF:0000210;;FF:0100578
|is_obsolete=
|library_id=CNhs11271
|library_id_phase_based=2:CNhs11271
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10484
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10484
|name=hepatoma cell line:Li-7
|name=hepatoma cell line:Li-7
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 60:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11271,LSID758,release008,COMPLETED
|profile_hcage=CNhs11271,LSID758,release008,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=107
|rna_box=107
|rna_catalog_number=
|rna_catalog_number=
Line 57: Line 78:
|rna_weight_ug=36.4795
|rna_weight_ug=36.4795
|sample_age=45
|sample_age=45
|sample_category=cell lines
|sample_cell_catalog=RCB1941
|sample_cell_catalog=RCB1941
|sample_cell_line=Li-7
|sample_cell_line=Li-7
Line 69: Line 91:
|sample_ethnicity=unknown
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.80256457968107e-254!GO:0043231;intracellular membrane-bound organelle;1.97085684561143e-213!GO:0043227;membrane-bound organelle;2.58947460035789e-213!GO:0043226;organelle;3.57197425886753e-210!GO:0043229;intracellular organelle;8.37252680458192e-210!GO:0005737;cytoplasm;2.30022706862444e-183!GO:0044422;organelle part;1.20259338918849e-143!GO:0044446;intracellular organelle part;2.88569234040855e-142!GO:0044444;cytoplasmic part;1.71335185190756e-140!GO:0044237;cellular metabolic process;2.11996406525514e-103!GO:0044238;primary metabolic process;9.83176793311125e-102!GO:0032991;macromolecular complex;2.45435028114803e-100!GO:0030529;ribonucleoprotein complex;4.18069633487675e-91!GO:0043170;macromolecule metabolic process;5.89419565284772e-91!GO:0005634;nucleus;3.2452146513669e-85!GO:0044428;nuclear part;1.27319005324617e-79!GO:0043233;organelle lumen;9.12015178525838e-79!GO:0031974;membrane-enclosed lumen;9.12015178525838e-79!GO:0005739;mitochondrion;3.37213895730546e-76!GO:0003723;RNA binding;2.28691308872108e-73!GO:0005515;protein binding;1.77790988998268e-71!GO:0031090;organelle membrane;6.6580178451593e-55!GO:0006396;RNA processing;8.76880437483143e-55!GO:0005840;ribosome;1.56038147417711e-53!GO:0043283;biopolymer metabolic process;7.22357851045537e-51!GO:0010467;gene expression;1.51145739675119e-49!GO:0044429;mitochondrial part;2.34293555518218e-49!GO:0019538;protein metabolic process;9.49481511395132e-49!GO:0006412;translation;9.80419069481243e-49!GO:0043234;protein complex;1.96990094096119e-48!GO:0031981;nuclear lumen;4.23363194732161e-48!GO:0033036;macromolecule localization;1.23038352419992e-46!GO:0016043;cellular component organization and biogenesis;5.09986368774959e-46!GO:0015031;protein transport;9.01733700469727e-46!GO:0031967;organelle envelope;1.86250225851958e-44!GO:0031975;envelope;2.89459226162167e-44!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.45430873053108e-44!GO:0003735;structural constituent of ribosome;8.41191236020305e-44!GO:0044267;cellular protein metabolic process;1.88670851593925e-43!GO:0044260;cellular macromolecule metabolic process;4.79461429858391e-43!GO:0009058;biosynthetic process;1.03690256343655e-42!GO:0008104;protein localization;4.44620041178828e-42!GO:0045184;establishment of protein localization;5.72958273556244e-42!GO:0044249;cellular biosynthetic process;1.26550990720898e-41!GO:0005829;cytosol;1.31454158882707e-41!GO:0016071;mRNA metabolic process;4.36954105979999e-41!GO:0009059;macromolecule biosynthetic process;7.89267310118653e-39!GO:0008380;RNA splicing;1.20016146826802e-37!GO:0033279;ribosomal subunit;2.36136837594679e-37!GO:0046907;intracellular transport;7.80207073718752e-35!GO:0006397;mRNA processing;1.26158679748118e-34!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.64410319705529e-32!GO:0005740;mitochondrial envelope;1.15508430192084e-30!GO:0019866;organelle inner membrane;9.20391165558811e-30!GO:0003676;nucleic acid binding;1.21982880686578e-29!GO:0006996;organelle organization and biogenesis;1.47462485898295e-29!GO:0031966;mitochondrial membrane;4.3573035485724e-29!GO:0043228;non-membrane-bound organelle;9.17173204433817e-29!GO:0043232;intracellular non-membrane-bound organelle;9.17173204433817e-29!GO:0005654;nucleoplasm;1.78015053320748e-28!GO:0006886;intracellular protein transport;4.31673419088085e-28!GO:0065003;macromolecular complex assembly;7.70567037160977e-28!GO:0005743;mitochondrial inner membrane;8.56289144249374e-28!GO:0000166;nucleotide binding;1.55258213607369e-27!GO:0005681;spliceosome;4.41964896982764e-26!GO:0016070;RNA metabolic process;1.20104077915073e-25!GO:0006259;DNA metabolic process;1.70441346029895e-25!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.05090629639976e-24!GO:0022607;cellular component assembly;1.29127927999039e-24!GO:0044451;nucleoplasm part;7.33553341827685e-24!GO:0012505;endomembrane system;1.92891856738887e-23!GO:0016462;pyrophosphatase activity;4.72664592519796e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.89106733376207e-23!GO:0051649;establishment of cellular localization;7.55028238587743e-23!GO:0051641;cellular localization;8.18807554082063e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;9.98328616514087e-23!GO:0031980;mitochondrial lumen;1.41149585616846e-22!GO:0005759;mitochondrial matrix;1.41149585616846e-22!GO:0017111;nucleoside-triphosphatase activity;1.54900376862149e-22!GO:0044445;cytosolic part;2.55612835633027e-21!GO:0006457;protein folding;4.11976960207984e-21!GO:0005730;nucleolus;5.46627152791839e-21!GO:0016874;ligase activity;2.7382263549021e-20!GO:0006119;oxidative phosphorylation;2.81397582667735e-20!GO:0015935;small ribosomal subunit;1.73000430218707e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;5.86690102386522e-19!GO:0032553;ribonucleotide binding;5.9223161830365e-19!GO:0032555;purine ribonucleotide binding;5.9223161830365e-19!GO:0017076;purine nucleotide binding;6.36640679386646e-19!GO:0044248;cellular catabolic process;6.36640679386646e-19!GO:0044455;mitochondrial membrane part;6.64228475032967e-19!GO:0015934;large ribosomal subunit;7.33850154736113e-19!GO:0006511;ubiquitin-dependent protein catabolic process;1.0522686339235e-18!GO:0005783;endoplasmic reticulum;1.06771225602917e-18!GO:0019941;modification-dependent protein catabolic process;1.14977991980353e-18!GO:0043632;modification-dependent macromolecule catabolic process;1.14977991980353e-18!GO:0044257;cellular protein catabolic process;1.6925023941809e-18!GO:0007049;cell cycle;1.92227811026941e-18!GO:0044265;cellular macromolecule catabolic process;2.37034641613841e-18!GO:0000502;proteasome complex (sensu Eukaryota);8.00001050333099e-18!GO:0008134;transcription factor binding;1.21101371151172e-17!GO:0006512;ubiquitin cycle;2.01516441418035e-17!GO:0022618;protein-RNA complex assembly;2.56999449941514e-17!GO:0043285;biopolymer catabolic process;6.01394254585918e-17!GO:0006974;response to DNA damage stimulus;7.17405169617088e-17!GO:0051186;cofactor metabolic process;1.61931391049282e-16!GO:0005761;mitochondrial ribosome;1.92200894250397e-16!GO:0000313;organellar ribosome;1.92200894250397e-16!GO:0044432;endoplasmic reticulum part;5.92504037738027e-16!GO:0051082;unfolded protein binding;6.13375458380784e-16!GO:0048770;pigment granule;8.39771678687114e-16!GO:0042470;melanosome;8.39771678687114e-16!GO:0008135;translation factor activity, nucleic acid binding;9.48770548063658e-16!GO:0005746;mitochondrial respiratory chain;1.09837446937735e-15!GO:0042254;ribosome biogenesis and assembly;2.44937105374871e-15!GO:0030163;protein catabolic process;6.98365615286179e-15!GO:0009057;macromolecule catabolic process;7.33537681436681e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;9.5335525814608e-15!GO:0005635;nuclear envelope;1.84188163105815e-14!GO:0009719;response to endogenous stimulus;1.89134794644852e-14!GO:0005524;ATP binding;4.14178693848214e-14!GO:0032559;adenyl ribonucleotide binding;4.53214098450449e-14!GO:0031965;nuclear membrane;4.60279687557517e-14!GO:0005794;Golgi apparatus;4.97257870464849e-14!GO:0016887;ATPase activity;5.27564972824325e-14!GO:0050136;NADH dehydrogenase (quinone) activity;5.45217362801634e-14!GO:0003954;NADH dehydrogenase activity;5.45217362801634e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.45217362801634e-14!GO:0030554;adenyl nucleotide binding;6.47000294640252e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;8.86581057941279e-14!GO:0000375;RNA splicing, via transesterification reactions;8.86581057941279e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.86581057941279e-14!GO:0044453;nuclear membrane part;3.90638809846614e-13!GO:0042623;ATPase activity, coupled;4.17102983780072e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.81999455204676e-13!GO:0006366;transcription from RNA polymerase II promoter;6.1255632799027e-13!GO:0043412;biopolymer modification;6.29129366737075e-13!GO:0006281;DNA repair;6.31594364185267e-13!GO:0006732;coenzyme metabolic process;6.38931141053434e-13!GO:0006605;protein targeting;6.60220238975594e-13!GO:0048193;Golgi vesicle transport;6.89013926997729e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.58710696688042e-13!GO:0009055;electron carrier activity;1.43504316637389e-12!GO:0022402;cell cycle process;1.6917106056909e-12!GO:0012501;programmed cell death;1.75767138300577e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.88407308740778e-12!GO:0042773;ATP synthesis coupled electron transport;1.88407308740778e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.12402066357075e-12!GO:0006915;apoptosis;2.88680636861183e-12!GO:0005789;endoplasmic reticulum membrane;3.12219513074689e-12!GO:0030964;NADH dehydrogenase complex (quinone);4.62286720326638e-12!GO:0045271;respiratory chain complex I;4.62286720326638e-12!GO:0005747;mitochondrial respiratory chain complex I;4.62286720326638e-12!GO:0006260;DNA replication;6.14934504475701e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.17733732509705e-11!GO:0009056;catabolic process;1.29363023959559e-11!GO:0008219;cell death;1.37266548172064e-11!GO:0016265;death;1.37266548172064e-11!GO:0006403;RNA localization;1.38628857735645e-11!GO:0050657;nucleic acid transport;1.79867548610399e-11!GO:0051236;establishment of RNA localization;1.79867548610399e-11!GO:0050658;RNA transport;1.79867548610399e-11!GO:0003743;translation initiation factor activity;1.8100216740619e-11!GO:0016192;vesicle-mediated transport;1.92021457894703e-11!GO:0016604;nuclear body;2.27668307024852e-11!GO:0000278;mitotic cell cycle;3.18193241568462e-11!GO:0003712;transcription cofactor activity;3.37161299874812e-11!GO:0006399;tRNA metabolic process;3.65090985095675e-11!GO:0006913;nucleocytoplasmic transport;3.88470964563924e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.90038238289982e-11!GO:0004386;helicase activity;4.82821770809367e-11!GO:0005643;nuclear pore;4.82821770809367e-11!GO:0006464;protein modification process;5.13793239574846e-11!GO:0065002;intracellular protein transport across a membrane;6.81103369244236e-11!GO:0050794;regulation of cellular process;7.15622178232199e-11!GO:0008565;protein transporter activity;8.00463863552419e-11!GO:0051169;nuclear transport;8.124595955805e-11!GO:0005793;ER-Golgi intermediate compartment;1.0054118104952e-10!GO:0005694;chromosome;1.05733065384734e-10!GO:0006413;translational initiation;1.60575311404223e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.8744978552016e-10!GO:0006364;rRNA processing;2.46876429998118e-10!GO:0016072;rRNA metabolic process;4.09444724141182e-10!GO:0051276;chromosome organization and biogenesis;4.76670919201903e-10!GO:0006461;protein complex assembly;5.0558239545819e-10!GO:0008026;ATP-dependent helicase activity;5.62665698904688e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.94044095884252e-10!GO:0006446;regulation of translational initiation;7.7768596019815e-10!GO:0046930;pore complex;8.62153912912117e-10!GO:0009060;aerobic respiration;1.10737245753745e-09!GO:0005768;endosome;1.13139505432334e-09!GO:0051028;mRNA transport;1.71268630385859e-09!GO:0008639;small protein conjugating enzyme activity;1.75355505803868e-09!GO:0043687;post-translational protein modification;1.77636263771271e-09!GO:0016607;nuclear speck;3.26695474000768e-09!GO:0004842;ubiquitin-protein ligase activity;3.45527293130591e-09!GO:0045333;cellular respiration;4.23283126742585e-09!GO:0000087;M phase of mitotic cell cycle;5.606928927877e-09!GO:0019787;small conjugating protein ligase activity;7.04654994097989e-09!GO:0044427;chromosomal part;7.04654994097989e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.08267401051155e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.08266096545682e-08!GO:0007067;mitosis;1.17849749165926e-08!GO:0048523;negative regulation of cellular process;1.21141328119089e-08!GO:0051301;cell division;1.74378352874263e-08!GO:0016881;acid-amino acid ligase activity;1.84386916875321e-08!GO:0006323;DNA packaging;2.91112143645219e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.19814356619707e-08!GO:0004812;aminoacyl-tRNA ligase activity;3.19814356619707e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.19814356619707e-08!GO:0016568;chromatin modification;4.80006639204727e-08!GO:0030532;small nuclear ribonucleoprotein complex;4.85657586482514e-08!GO:0009259;ribonucleotide metabolic process;5.01585118534735e-08!GO:0043038;amino acid activation;5.29110135815149e-08!GO:0006418;tRNA aminoacylation for protein translation;5.29110135815149e-08!GO:0043039;tRNA aminoacylation;5.29110135815149e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.12776354242019e-08!GO:0022403;cell cycle phase;6.24424922583989e-08!GO:0051188;cofactor biosynthetic process;7.19989697054983e-08!GO:0006163;purine nucleotide metabolic process;7.89669613322076e-08!GO:0043067;regulation of programmed cell death;8.07962966297519e-08!GO:0042981;regulation of apoptosis;8.85670276589141e-08!GO:0006099;tricarboxylic acid cycle;1.23122396932486e-07!GO:0046356;acetyl-CoA catabolic process;1.23122396932486e-07!GO:0050789;regulation of biological process;1.23735071111048e-07!GO:0043566;structure-specific DNA binding;1.29099931695033e-07!GO:0016491;oxidoreductase activity;1.32714494008551e-07!GO:0005525;GTP binding;1.72491958930527e-07!GO:0051246;regulation of protein metabolic process;1.77906566839371e-07!GO:0017038;protein import;1.78456499908804e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.81266183442563e-07!GO:0051726;regulation of cell cycle;1.97082185273299e-07!GO:0051187;cofactor catabolic process;2.04369315905275e-07!GO:0019222;regulation of metabolic process;2.48637060800413e-07!GO:0000074;regulation of progression through cell cycle;2.49359533533867e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.59217485243546e-07!GO:0048519;negative regulation of biological process;2.91637321803137e-07!GO:0015986;ATP synthesis coupled proton transport;2.96994235162201e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.96994235162201e-07!GO:0005667;transcription factor complex;2.98247451169469e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.22208378074055e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.56876848557095e-07!GO:0009150;purine ribonucleotide metabolic process;3.7431456404008e-07!GO:0006164;purine nucleotide biosynthetic process;3.8573646952247e-07!GO:0044440;endosomal part;3.87927629529528e-07!GO:0010008;endosome membrane;3.87927629529528e-07!GO:0007005;mitochondrion organization and biogenesis;4.08328140889126e-07!GO:0006084;acetyl-CoA metabolic process;4.08909231020474e-07!GO:0016787;hydrolase activity;4.39929404775166e-07!GO:0000279;M phase;5.06168735974071e-07!GO:0009199;ribonucleoside triphosphate metabolic process;5.15663042658411e-07!GO:0003924;GTPase activity;5.18069716254609e-07!GO:0019829;cation-transporting ATPase activity;5.25298080201875e-07!GO:0032446;protein modification by small protein conjugation;5.64303371458242e-07!GO:0005770;late endosome;6.41719184530074e-07!GO:0016567;protein ubiquitination;6.7248916381256e-07!GO:0009260;ribonucleotide biosynthetic process;7.18237325743473e-07!GO:0031988;membrane-bound vesicle;8.04743270736873e-07!GO:0009141;nucleoside triphosphate metabolic process;8.08786850511305e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.34256412988893e-07!GO:0009144;purine nucleoside triphosphate metabolic process;8.34256412988893e-07!GO:0043069;negative regulation of programmed cell death;8.41060876435711e-07!GO:0016023;cytoplasmic membrane-bound vesicle;9.59044170837949e-07!GO:0016563;transcription activator activity;1.14831583654108e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.15422587047296e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.15422587047296e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.19702005040018e-06!GO:0009108;coenzyme biosynthetic process;1.33556875735612e-06!GO:0031982;vesicle;1.35029880426055e-06!GO:0009109;coenzyme catabolic process;1.36001671814024e-06!GO:0004298;threonine endopeptidase activity;1.74365108016962e-06!GO:0000245;spliceosome assembly;1.80820683763933e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.81797836661145e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.91726155754391e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.91726155754391e-06!GO:0031410;cytoplasmic vesicle;1.98934675954434e-06!GO:0043066;negative regulation of apoptosis;2.0960686738388e-06!GO:0046034;ATP metabolic process;2.12386058354599e-06!GO:0032561;guanyl ribonucleotide binding;2.19659643190766e-06!GO:0019001;guanyl nucleotide binding;2.19659643190766e-06!GO:0016564;transcription repressor activity;2.68039255209424e-06!GO:0044431;Golgi apparatus part;3.13634138758132e-06!GO:0030120;vesicle coat;3.18164027986028e-06!GO:0030662;coated vesicle membrane;3.18164027986028e-06!GO:0009892;negative regulation of metabolic process;3.24869950191759e-06!GO:0016740;transferase activity;3.53559989484363e-06!GO:0015630;microtubule cytoskeleton;3.56823125374546e-06!GO:0006754;ATP biosynthetic process;3.92696659426771e-06!GO:0006753;nucleoside phosphate metabolic process;3.92696659426771e-06!GO:0003724;RNA helicase activity;3.95395316945378e-06!GO:0031324;negative regulation of cellular metabolic process;4.95614947757384e-06!GO:0048475;coated membrane;5.00110388405771e-06!GO:0030117;membrane coat;5.00110388405771e-06!GO:0015078;hydrogen ion transmembrane transporter activity;5.19836226097625e-06!GO:0009117;nucleotide metabolic process;5.25702548549635e-06!GO:0005762;mitochondrial large ribosomal subunit;5.89821846351867e-06!GO:0000315;organellar large ribosomal subunit;5.89821846351867e-06!GO:0006613;cotranslational protein targeting to membrane;6.29590929564909e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.0280385585683e-06!GO:0043623;cellular protein complex assembly;7.33134538481439e-06!GO:0003713;transcription coactivator activity;7.40375204130003e-06!GO:0045259;proton-transporting ATP synthase complex;8.77262426598965e-06!GO:0003714;transcription corepressor activity;8.89369252747682e-06!GO:0051427;hormone receptor binding;9.60311282605241e-06!GO:0000785;chromatin;1.00768600380254e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.3558808867502e-05!GO:0006752;group transfer coenzyme metabolic process;1.46139407344994e-05!GO:0006261;DNA-dependent DNA replication;1.47458060597355e-05!GO:0005798;Golgi-associated vesicle;1.68079581048826e-05!GO:0006082;organic acid metabolic process;1.89686620167512e-05!GO:0043021;ribonucleoprotein binding;2.01339503448367e-05!GO:0051168;nuclear export;2.0497023691708e-05!GO:0006793;phosphorus metabolic process;2.06577780741722e-05!GO:0006796;phosphate metabolic process;2.06577780741722e-05!GO:0019752;carboxylic acid metabolic process;2.1556706892801e-05!GO:0035257;nuclear hormone receptor binding;2.181051795759e-05!GO:0003697;single-stranded DNA binding;2.19284306889251e-05!GO:0006091;generation of precursor metabolites and energy;2.39329464663887e-05!GO:0051170;nuclear import;2.77715640929889e-05!GO:0000151;ubiquitin ligase complex;2.8457975768894e-05!GO:0016853;isomerase activity;3.07806258952112e-05!GO:0000314;organellar small ribosomal subunit;3.10164905275715e-05!GO:0005763;mitochondrial small ribosomal subunit;3.10164905275715e-05!GO:0045454;cell redox homeostasis;3.11303245867042e-05!GO:0016779;nucleotidyltransferase activity;3.47480485749254e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.87233069150936e-05!GO:0031323;regulation of cellular metabolic process;4.7292568412416e-05!GO:0007243;protein kinase cascade;4.85555776375486e-05!GO:0006333;chromatin assembly or disassembly;5.3478412728204e-05!GO:0006606;protein import into nucleus;5.7143390252576e-05!GO:0005788;endoplasmic reticulum lumen;6.07245679752723e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.88206280787487e-05!GO:0000139;Golgi membrane;7.74363903136419e-05!GO:0048471;perinuclear region of cytoplasm;9.43677615705429e-05!GO:0008186;RNA-dependent ATPase activity;9.81200445216034e-05!GO:0006916;anti-apoptosis;0.000117963859890227!GO:0030867;rough endoplasmic reticulum membrane;0.00011830976917345!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000119970047419255!GO:0015399;primary active transmembrane transporter activity;0.000119970047419255!GO:0003899;DNA-directed RNA polymerase activity;0.000122178265942301!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000128617964837799!GO:0015980;energy derivation by oxidation of organic compounds;0.000147528135511052!GO:0065004;protein-DNA complex assembly;0.000149134044945651!GO:0065007;biological regulation;0.00015953821543112!GO:0008033;tRNA processing;0.000166894760873945!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000174164954830085!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00017442806980725!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000178118039811282!GO:0008654;phospholipid biosynthetic process;0.000191744570432937!GO:0031968;organelle outer membrane;0.000197438283764373!GO:0044452;nucleolar part;0.000198562656971132!GO:0006402;mRNA catabolic process;0.000203332116504759!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000209095546692599!GO:0003690;double-stranded DNA binding;0.000209125082558034!GO:0051789;response to protein stimulus;0.000230397292212643!GO:0006986;response to unfolded protein;0.000230397292212643!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000239224400949715!GO:0005769;early endosome;0.000247108761710408!GO:0003702;RNA polymerase II transcription factor activity;0.000265529959822742!GO:0050662;coenzyme binding;0.000277670965792011!GO:0005773;vacuole;0.000280671120215684!GO:0019867;outer membrane;0.000288346046682153!GO:0006350;transcription;0.000300575632223034!GO:0004004;ATP-dependent RNA helicase activity;0.000301744786919389!GO:0016310;phosphorylation;0.000305209888348742!GO:0007264;small GTPase mediated signal transduction;0.000324902354648118!GO:0008094;DNA-dependent ATPase activity;0.000328318620599379!GO:0006650;glycerophospholipid metabolic process;0.000332024064532975!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00036026776428485!GO:0006612;protein targeting to membrane;0.000365822673471572!GO:0005657;replication fork;0.000380352324659533!GO:0045893;positive regulation of transcription, DNA-dependent;0.000398353888594333!GO:0045941;positive regulation of transcription;0.000423717273538131!GO:0048522;positive regulation of cellular process;0.000428846288966897!GO:0046483;heterocycle metabolic process;0.000459613573180326!GO:0043681;protein import into mitochondrion;0.000460116855056741!GO:0005813;centrosome;0.00049780389169701!GO:0016481;negative regulation of transcription;0.000514022881332501!GO:0007051;spindle organization and biogenesis;0.000629469987053654!GO:0016363;nuclear matrix;0.000677704105235512!GO:0005741;mitochondrial outer membrane;0.000718773269104!GO:0042802;identical protein binding;0.000722601923634619!GO:0006302;double-strand break repair;0.000722601923634619!GO:0003678;DNA helicase activity;0.00072899227272015!GO:0006626;protein targeting to mitochondrion;0.000734009627086669!GO:0048500;signal recognition particle;0.000734120041851554!GO:0005815;microtubule organizing center;0.0007476013397984!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000750690439977587!GO:0003729;mRNA binding;0.000763250013891988!GO:0008250;oligosaccharyl transferase complex;0.000823149092668341!GO:0051920;peroxiredoxin activity;0.00082969888682913!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000835299133375803!GO:0000049;tRNA binding;0.000876129273573529!GO:0006891;intra-Golgi vesicle-mediated transport;0.000907782884332635!GO:0006401;RNA catabolic process;0.000929457590329073!GO:0010468;regulation of gene expression;0.000936621668335845!GO:0000323;lytic vacuole;0.000952646539568183!GO:0005764;lysosome;0.000952646539568183!GO:0030880;RNA polymerase complex;0.000966143788450411!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000975111263282755!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00100828817154774!GO:0006383;transcription from RNA polymerase III promoter;0.00104904235736917!GO:0006839;mitochondrial transport;0.00106205533608579!GO:0005791;rough endoplasmic reticulum;0.00106205533608579!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00106205533608579!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00106205533608579!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00106205533608579!GO:0006950;response to stress;0.00106205533608579!GO:0033116;ER-Golgi intermediate compartment membrane;0.00106205533608579!GO:0046489;phosphoinositide biosynthetic process;0.0011049384583785!GO:0005885;Arp2/3 protein complex;0.00111544261054572!GO:0006414;translational elongation;0.00111559431721258!GO:0046983;protein dimerization activity;0.00111935499216776!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00114041324727862!GO:0005905;coated pit;0.00116337243940142!GO:0007010;cytoskeleton organization and biogenesis;0.00117652115503551!GO:0003682;chromatin binding;0.00122993499551726!GO:0016859;cis-trans isomerase activity;0.00126242301050367!GO:0016741;transferase activity, transferring one-carbon groups;0.00128911683343823!GO:0005684;U2-dependent spliceosome;0.00128911683343823!GO:0019899;enzyme binding;0.00131783071014476!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00132665340694038!GO:0031072;heat shock protein binding;0.00135317278131762!GO:0048037;cofactor binding;0.00137264288794915!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00138044313250384!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00141722562293591!GO:0006807;nitrogen compound metabolic process;0.00145796076771225!GO:0006520;amino acid metabolic process;0.00151347696616807!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00151770307601116!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00156631135058031!GO:0000059;protein import into nucleus, docking;0.00156631135058031!GO:0051052;regulation of DNA metabolic process;0.00158862587699951!GO:0004576;oligosaccharyl transferase activity;0.00158972731728058!GO:0051287;NAD binding;0.00165815636710298!GO:0043492;ATPase activity, coupled to movement of substances;0.00166343343683546!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00169094494829405!GO:0008168;methyltransferase activity;0.00173051048426166!GO:0022890;inorganic cation transmembrane transporter activity;0.00179480091859404!GO:0046474;glycerophospholipid biosynthetic process;0.0018839243231525!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00190449870560725!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00194518289184571!GO:0000428;DNA-directed RNA polymerase complex;0.00194518289184571!GO:0045786;negative regulation of progression through cell cycle;0.00194609776092088!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00194609776092088!GO:0005874;microtubule;0.00201577325789017!GO:0005819;spindle;0.00216902912590282!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00217694248540878!GO:0016197;endosome transport;0.0021800365256426!GO:0051087;chaperone binding;0.00221259612270716!GO:0030384;phosphoinositide metabolic process;0.00223963211819126!GO:0008361;regulation of cell size;0.00223963211819126!GO:0016126;sterol biosynthetic process;0.00225945694652113!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00230116284248782!GO:0045047;protein targeting to ER;0.00230116284248782!GO:0032774;RNA biosynthetic process;0.00233991602309064!GO:0006695;cholesterol biosynthetic process;0.00234977321214812!GO:0003746;translation elongation factor activity;0.00246434282139623!GO:0035258;steroid hormone receptor binding;0.00247018489479748!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00248136392806068!GO:0008312;7S RNA binding;0.00248609816070682!GO:0006351;transcription, DNA-dependent;0.00257297938404342!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00266389189715574!GO:0006338;chromatin remodeling;0.00266621676618446!GO:0044262;cellular carbohydrate metabolic process;0.00273214380245583!GO:0008022;protein C-terminus binding;0.00310324683622809!GO:0007006;mitochondrial membrane organization and biogenesis;0.0031593424000784!GO:0009308;amine metabolic process;0.0032121862687238!GO:0030176;integral to endoplasmic reticulum membrane;0.0032121862687238!GO:0006405;RNA export from nucleus;0.00329536494583391!GO:0046904;calcium oxalate binding;0.00332859153437552!GO:0030568;plasmin inhibitor activity;0.00332859153437552!GO:0016049;cell growth;0.00334310189735727!GO:0009165;nucleotide biosynthetic process;0.00340168064270272!GO:0019843;rRNA binding;0.00349235224502427!GO:0006611;protein export from nucleus;0.00359300001280824!GO:0051329;interphase of mitotic cell cycle;0.00359337280396209!GO:0030036;actin cytoskeleton organization and biogenesis;0.00372475789258576!GO:0006352;transcription initiation;0.0037280254299705!GO:0031252;leading edge;0.00378039278498644!GO:0016272;prefoldin complex;0.00380298048112042!GO:0065009;regulation of a molecular function;0.00380441335470193!GO:0006595;polyamine metabolic process;0.00380862126228589!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.00383065875958336!GO:0005048;signal sequence binding;0.00383065875958336!GO:0007017;microtubule-based process;0.00386637612073102!GO:0006519;amino acid and derivative metabolic process;0.00387408024707099!GO:0048468;cell development;0.00408041253659354!GO:0009116;nucleoside metabolic process;0.00410388113874907!GO:0031902;late endosome membrane;0.00411808470507725!GO:0018196;peptidyl-asparagine modification;0.0041928641047649!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0041928641047649!GO:0030663;COPI coated vesicle membrane;0.00447853800402971!GO:0030126;COPI vesicle coat;0.00447853800402971!GO:0030133;transport vesicle;0.00463147223416837!GO:0030659;cytoplasmic vesicle membrane;0.00474407503160131!GO:0045045;secretory pathway;0.00481788005064508!GO:0006749;glutathione metabolic process;0.00509582320163052!GO:0051128;regulation of cellular component organization and biogenesis;0.00546589041716302!GO:0001558;regulation of cell growth;0.00555932439275178!GO:0015631;tubulin binding;0.00581698575451176!GO:0016251;general RNA polymerase II transcription factor activity;0.00618832300827842!GO:0032508;DNA duplex unwinding;0.00618832300827842!GO:0032392;DNA geometric change;0.00618832300827842!GO:0005637;nuclear inner membrane;0.00618832300827842!GO:0044433;cytoplasmic vesicle part;0.00620704418056259!GO:0051252;regulation of RNA metabolic process;0.0062212811856716!GO:0008234;cysteine-type peptidase activity;0.00643459244261249!GO:0012506;vesicle membrane;0.00658624762936213!GO:0051325;interphase;0.00661249443266586!GO:0000775;chromosome, pericentric region;0.00661371404211003!GO:0030132;clathrin coat of coated pit;0.00673587229949539!GO:0008092;cytoskeletal protein binding;0.00691655341324533!GO:0043488;regulation of mRNA stability;0.00714508347885696!GO:0043487;regulation of RNA stability;0.00714508347885696!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00735486997996956!GO:0015002;heme-copper terminal oxidase activity;0.00735486997996956!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00735486997996956!GO:0004129;cytochrome-c oxidase activity;0.00735486997996956!GO:0044255;cellular lipid metabolic process;0.00756205761496583!GO:0030658;transport vesicle membrane;0.00775913540384598!GO:0051539;4 iron, 4 sulfur cluster binding;0.00793680000748991!GO:0008610;lipid biosynthetic process;0.00795154521131871!GO:0008139;nuclear localization sequence binding;0.00797115830858742!GO:0048487;beta-tubulin binding;0.00803403259218998!GO:0008180;signalosome;0.00829368915219968!GO:0046467;membrane lipid biosynthetic process;0.00843734682550717!GO:0043022;ribosome binding;0.00860589387041256!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00867960804328006!GO:0016407;acetyltransferase activity;0.00874231127913663!GO:0047017;prostaglandin-F synthase activity;0.00883356984122734!GO:0000776;kinetochore;0.00900369417616103!GO:0015992;proton transport;0.00903061402311476!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00933605670096401!GO:0003711;transcription elongation regulator activity;0.0093473023129598!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00948417560541653!GO:0005832;chaperonin-containing T-complex;0.00948557262499951!GO:0030118;clathrin coat;0.00964535012672242!GO:0007052;mitotic spindle organization and biogenesis;0.00970686851092271!GO:0030503;regulation of cell redox homeostasis;0.0097088550433633!GO:0006818;hydrogen transport;0.00978629729969797!GO:0004527;exonuclease activity;0.0100813190299751!GO:0030521;androgen receptor signaling pathway;0.0103330350121472!GO:0001889;liver development;0.0108486864766621!GO:0004448;isocitrate dehydrogenase activity;0.0109024583854964!GO:0043624;cellular protein complex disassembly;0.0109101002392526!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0109560498093419!GO:0007040;lysosome organization and biogenesis;0.0111269154571373!GO:0045892;negative regulation of transcription, DNA-dependent;0.0111300990214878!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0111731521487897!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0111731521487897!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0117421650035939!GO:0048518;positive regulation of biological process;0.0118986755528853!GO:0003955;NAD(P)H dehydrogenase (quinone) activity;0.0125133883789463!GO:0006497;protein amino acid lipidation;0.0127466909144052!GO:0030134;ER to Golgi transport vesicle;0.0132381707415653!GO:0042158;lipoprotein biosynthetic process;0.0140869666634538!GO:0003684;damaged DNA binding;0.0140869666634538!GO:0030029;actin filament-based process;0.0141515893726822!GO:0007030;Golgi organization and biogenesis;0.014187462922847!GO:0033673;negative regulation of kinase activity;0.0142136618464323!GO:0006469;negative regulation of protein kinase activity;0.0142136618464323!GO:0030137;COPI-coated vesicle;0.01428305423027!GO:0045449;regulation of transcription;0.014462229585913!GO:0000075;cell cycle checkpoint;0.0147184720991935!GO:0006144;purine base metabolic process;0.0148407742245044!GO:0047006;20-alpha-hydroxysteroid dehydrogenase activity;0.0149050204990621!GO:0006066;alcohol metabolic process;0.0155671233993955!GO:0051716;cellular response to stimulus;0.0155671233993955!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0156488190027032!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0156523801409446!GO:0030660;Golgi-associated vesicle membrane;0.0159984212914412!GO:0008632;apoptotic program;0.0159988903410767!GO:0004674;protein serine/threonine kinase activity;0.0160062328335654!GO:0005758;mitochondrial intermembrane space;0.0160214072087677!GO:0046982;protein heterodimerization activity;0.0161052607978968!GO:0019783;small conjugating protein-specific protease activity;0.0161252732431596!GO:0016408;C-acyltransferase activity;0.0161263882226833!GO:0008287;protein serine/threonine phosphatase complex;0.0165049363078343!GO:0051540;metal cluster binding;0.0168557886216819!GO:0051536;iron-sulfur cluster binding;0.0168557886216819!GO:0006268;DNA unwinding during replication;0.016914906544047!GO:0046519;sphingoid metabolic process;0.017544374362235!GO:0006672;ceramide metabolic process;0.0177710945652604!GO:0007021;tubulin folding;0.0179170218659008!GO:0009112;nucleobase metabolic process;0.0180241543618265!GO:0031901;early endosome membrane;0.0180859122701825!GO:0000096;sulfur amino acid metabolic process;0.0182481574271992!GO:0006310;DNA recombination;0.0183181532305708!GO:0031124;mRNA 3'-end processing;0.0183181532305708!GO:0008538;proteasome activator activity;0.0183181532305708!GO:0004185;serine carboxypeptidase activity;0.0183181532305708!GO:0032984;macromolecular complex disassembly;0.0184979660182274!GO:0004843;ubiquitin-specific protease activity;0.0185244875933179!GO:0022406;membrane docking;0.0185490597356363!GO:0048278;vesicle docking;0.0185490597356363!GO:0016790;thiolester hydrolase activity;0.0186850991089952!GO:0006778;porphyrin metabolic process;0.0189692408002953!GO:0033013;tetrapyrrole metabolic process;0.0189692408002953!GO:0004680;casein kinase activity;0.0196028687731561!GO:0009893;positive regulation of metabolic process;0.0196380122187399!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0202048262227146!GO:0015036;disulfide oxidoreductase activity;0.020307926437176!GO:0006740;NADPH regeneration;0.0205301061497634!GO:0006098;pentose-phosphate shunt;0.0205301061497634!GO:0043065;positive regulation of apoptosis;0.0209780637392135!GO:0006506;GPI anchor biosynthetic process;0.0211691158358491!GO:0043284;biopolymer biosynthetic process;0.0214176258732587!GO:0009451;RNA modification;0.0217160436437408!GO:0040008;regulation of growth;0.0218193897605429!GO:0031497;chromatin assembly;0.0218212199931955!GO:0006979;response to oxidative stress;0.0222653906691683!GO:0004221;ubiquitin thiolesterase activity;0.0227152230179357!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0227432543188698!GO:0031970;organelle envelope lumen;0.0227834312342831!GO:0006400;tRNA modification;0.0228297761990093!GO:0006892;post-Golgi vesicle-mediated transport;0.0230717843924693!GO:0004003;ATP-dependent DNA helicase activity;0.0230717843924693!GO:0006118;electron transport;0.0237934803608159!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0239132965738291!GO:0000118;histone deacetylase complex;0.0242539468528577!GO:0006904;vesicle docking during exocytosis;0.0243138227643573!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0243758251344056!GO:0051348;negative regulation of transferase activity;0.0244419506944858!GO:0007033;vacuole organization and biogenesis;0.024655305531857!GO:0006643;membrane lipid metabolic process;0.0249150816915028!GO:0051101;regulation of DNA binding;0.0253428701580257!GO:0005669;transcription factor TFIID complex;0.0254016146569757!GO:0045446;endothelial cell differentiation;0.0254016146569757!GO:0035267;NuA4 histone acetyltransferase complex;0.026473820806101!GO:0035035;histone acetyltransferase binding;0.0266384302980012!GO:0006658;phosphatidylserine metabolic process;0.0270187826498842!GO:0043068;positive regulation of programmed cell death;0.0271876544358164!GO:0005869;dynactin complex;0.0276584475092018!GO:0006334;nucleosome assembly;0.0276584475092018!GO:0000339;RNA cap binding;0.0277892770056698!GO:0008017;microtubule binding;0.0280139662481288!GO:0009303;rRNA transcription;0.0281195688703325!GO:0043189;H4/H2A histone acetyltransferase complex;0.0282328876866198!GO:0043241;protein complex disassembly;0.0290444482950935!GO:0006629;lipid metabolic process;0.0290444482950935!GO:0030508;thiol-disulfide exchange intermediate activity;0.0291180404672818!GO:0009066;aspartate family amino acid metabolic process;0.0295630640839574!GO:0006505;GPI anchor metabolic process;0.0296733444379986!GO:0016044;membrane organization and biogenesis;0.0299759307187987!GO:0008408;3'-5' exonuclease activity;0.0301622458275132!GO:0007088;regulation of mitosis;0.0301703310865305!GO:0040029;regulation of gene expression, epigenetic;0.0305771633786353!GO:0017166;vinculin binding;0.0311173193726376!GO:0005521;lamin binding;0.0311173193726376!GO:0006275;regulation of DNA replication;0.0315798920096947!GO:0043130;ubiquitin binding;0.0321075449911873!GO:0032182;small conjugating protein binding;0.0321075449911873!GO:0004177;aminopeptidase activity;0.0324239259353954!GO:0008320;protein transmembrane transporter activity;0.0324239259353954!GO:0030127;COPII vesicle coat;0.0324239259353954!GO:0012507;ER to Golgi transport vesicle membrane;0.0324239259353954!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0324732156040108!GO:0010257;NADH dehydrogenase complex assembly;0.0324732156040108!GO:0033108;mitochondrial respiratory chain complex assembly;0.0324732156040108!GO:0030518;steroid hormone receptor signaling pathway;0.03250093099282!GO:0006417;regulation of translation;0.0329909065873687!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0334507412516312!GO:0007242;intracellular signaling cascade;0.0334587730498764!GO:0019318;hexose metabolic process;0.0337041978574492!GO:0003923;GPI-anchor transamidase activity;0.0338848986237755!GO:0016255;attachment of GPI anchor to protein;0.0338848986237755!GO:0042765;GPI-anchor transamidase complex;0.0338848986237755!GO:0006376;mRNA splice site selection;0.0339427822800985!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0339427822800985!GO:0051338;regulation of transferase activity;0.0339427822800985!GO:0006984;ER-nuclear signaling pathway;0.0342541156913564!GO:0051775;response to redox state;0.0342638987283826!GO:0006980;redox signal response;0.0342638987283826!GO:0030125;clathrin vesicle coat;0.0342638987283826!GO:0030665;clathrin coated vesicle membrane;0.0342638987283826!GO:0030119;AP-type membrane coat adaptor complex;0.0343271434775452!GO:0006596;polyamine biosynthetic process;0.0345299257598807!GO:0032200;telomere organization and biogenesis;0.0345307832649164!GO:0000723;telomere maintenance;0.0345307832649164!GO:0009889;regulation of biosynthetic process;0.0346708472085687!GO:0006355;regulation of transcription, DNA-dependent;0.0349698817259072!GO:0042176;regulation of protein catabolic process;0.0349698817259072!GO:0006378;mRNA polyadenylation;0.0349812835520734!GO:0000123;histone acetyltransferase complex;0.0351795168217472!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0351795168217472!GO:0006564;L-serine biosynthetic process;0.0353944924344931!GO:0005844;polysome;0.0357185325409798!GO:0005996;monosaccharide metabolic process;0.0358139576642988!GO:0031396;regulation of protein ubiquitination;0.0360214745836417!GO:0022411;cellular component disassembly;0.0366641359680938!GO:0030140;trans-Golgi network transport vesicle;0.0368995009294248!GO:0006739;NADP metabolic process;0.0369319943546311!GO:0016125;sterol metabolic process;0.0375597062899869!GO:0000287;magnesium ion binding;0.0376071443909749!GO:0050790;regulation of catalytic activity;0.0377850051652869!GO:0022884;macromolecule transmembrane transporter activity;0.0381873851094937!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0381873851094937!GO:0042770;DNA damage response, signal transduction;0.0381873851094937!GO:0003979;UDP-glucose 6-dehydrogenase activity;0.0382124615662105!GO:0046398;UDP-glucuronate metabolic process;0.0382124615662105!GO:0006065;UDP-glucuronate biosynthetic process;0.0382124615662105!GO:0046399;glucuronate biosynthetic process;0.0382124615662105!GO:0000209;protein polyubiquitination;0.0386101810373816!GO:0042393;histone binding;0.0387602284784856!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0388302698017854!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0388302698017854!GO:0045039;protein import into mitochondrial inner membrane;0.0388302698017854!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0397083901747451!GO:0005777;peroxisome;0.0397083901747451!GO:0042579;microbody;0.0397083901747451!GO:0042168;heme metabolic process;0.0397083901747451!GO:0008629;induction of apoptosis by intracellular signals;0.0397083901747451!GO:0043407;negative regulation of MAP kinase activity;0.0397083901747451!GO:0030433;ER-associated protein catabolic process;0.0399641283289863!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0399641283289863!GO:0004300;enoyl-CoA hydratase activity;0.0403142261502232!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0403142261502232!GO:0016791;phosphoric monoester hydrolase activity;0.0403678177018829!GO:0004192;cathepsin D activity;0.040631084812871!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.040631084812871!GO:0050811;GABA receptor binding;0.0410341268702383!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.041038717968222!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.0412046467337126!GO:0008537;proteasome activator complex;0.0418979599762632!GO:0051248;negative regulation of protein metabolic process;0.0419129983981528!GO:0050681;androgen receptor binding;0.0419129983981528!GO:0000178;exosome (RNase complex);0.042166440917514!GO:0051651;maintenance of cellular localization;0.0429574419912454!GO:0007034;vacuolar transport;0.04302344548456!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0434864427012619!GO:0006661;phosphatidylinositol biosynthetic process;0.0436056101938983!GO:0004532;exoribonuclease activity;0.0438140183878673!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0438140183878673!GO:0008286;insulin receptor signaling pathway;0.0441793646254631!GO:0030131;clathrin adaptor complex;0.04497826479541!GO:0050750;low-density lipoprotein receptor binding;0.0455678235488101!GO:0046966;thyroid hormone receptor binding;0.0455695798409508!GO:0003756;protein disulfide isomerase activity;0.0457250392512122!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0457250392512122!GO:0031399;regulation of protein modification process;0.0460347214860954!GO:0046488;phosphatidylinositol metabolic process;0.0461378933655875!GO:0030968;unfolded protein response;0.0461881862330982!GO:0022415;viral reproductive process;0.0462146632683256!GO:0016311;dephosphorylation;0.0462641948326517!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0465992492536754!GO:0001666;response to hypoxia;0.0469683129214499!GO:0043549;regulation of kinase activity;0.0487097376473404
|sample_id=10484
|sample_id=10484
|sample_note=
|sample_note=
Line 76: Line 99:
|sample_tissue=liver
|sample_tissue=liver
|top_motifs=HNF1A:3.68810866596;FOXQ1:2.50479712587;FOXD3:2.32699312722;ONECUT1,2:2.22184601046;ADNP_IRX_SIX_ZHX:2.00853097422;HNF4A_NR2F1,2:2.0028509829;FOXA2:1.7555617709;HOX{A6,A7,B6,B7}:1.72523561611;NR6A1:1.70665555788;AIRE:1.68106855961;NKX2-1,4:1.3937918511;T:1.37241876422;bHLH_family:1.21684780571;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.15265937972;DBP:1.1057026607;FOX{D1,D2}:1.09114724554;RORA:1.01513378726;NFE2L2:0.995691908652;CUX2:0.969203082386;POU6F1:0.954321163959;FOX{F1,F2,J1}:0.94907724752;EN1,2:0.854702615088;CEBPA,B_DDIT3:0.824771265751;STAT5{A,B}:0.802091078077;TEF:0.792641936231;ZBTB16:0.776397991976;NKX3-1:0.732720695823;CDX1,2,4:0.666859157585;PAX8:0.63671778062;PITX1..3:0.623502391548;ZEB1:0.62198562414;SOX2:0.609594289166;GATA6:0.604668073201;ELK1,4_GABP{A,B1}:0.601308954158;CRX:0.600618482819;ZNF143:0.584002621348;FOXP1:0.564696350041;RBPJ:0.561799743225;NKX3-2:0.559577682266;MYOD1:0.55728653626;SOX5:0.556127547521;NFY{A,B,C}:0.529035479456;HOX{A4,D4}:0.524711572098;FOX{I1,J2}:0.516745519107;TFAP2B:0.490457297065;HMGA1,2:0.488576987653;PBX1:0.476136713615;TFDP1:0.468782078554;EBF1:0.468619994676;PAX1,9:0.460111910273;EVI1:0.456996983344;TLX1..3_NFIC{dimer}:0.451767911007;LHX3,4:0.441091825545;RFX1:0.43449228103;E2F1..5:0.433270695952;HIC1:0.430179630745;NFE2:0.426918909814;NR1H4:0.422559740824;BPTF:0.390925991804;NKX6-1,2:0.383988978043;MED-1{core}:0.383826869549;ATF2:0.350591138925;YY1:0.345063449077;RXR{A,B,G}:0.340607823164;ZFP161:0.328088217275;ESRRA:0.309998117102;SNAI1..3:0.302287857952;NKX2-3_NKX2-5:0.298635565518;RFX2..5_RFXANK_RFXAP:0.277687525988;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.276939611743;HOXA9_MEIS1:0.269927412977;ATF4:0.263761321943;EP300:0.245840226007;OCT4_SOX2{dimer}:0.227934745231;BREu{core}:0.226535949889;STAT1,3:0.222428699369;IKZF2:0.217282747826;STAT2,4,6:0.213151271482;PDX1:0.209355173672;FOXL1:0.203196917986;AHR_ARNT_ARNT2:0.191817878366;TBP:0.176110105208;PATZ1:0.174490877854;MTE{core}:0.162839017364;IRF7:0.149943407504;MYB:0.137889134099;VSX1,2:0.136989306161;POU5F1:0.106758676688;SOX{8,9,10}:0.0893849395567;GFI1B:0.0651055612608;FOXN1:0.0626610073406;FOXP3:0.0574483536236;POU1F1:0.056616586565;EGR1..3:0.053943643145;NFIL3:0.0308014502709;TFAP2{A,C}:0.0279340810417;TEAD1:0.0183166659152;HAND1,2:-0.0115941272542;MEF2{A,B,C,D}:-0.0438306191817;CDC5L:-0.0460415151232;FOSL2:-0.049069155126;HES1:-0.0618051377042;LMO2:-0.0636065258741;PAX5:-0.0771020307972;NR5A1,2:-0.0787114045118;IKZF1:-0.0909366643272;IRF1,2:-0.0976633880526;NFIX:-0.0992032652253;HLF:-0.120358880744;SREBF1,2:-0.12358381392;NHLH1,2:-0.130199960619;PRRX1,2:-0.148820793656;MAZ:-0.174696359132;NRF1:-0.176055549465;ATF5_CREB3:-0.177864153207;UFEwm:-0.188387333891;SP1:-0.192237197291;NFKB1_REL_RELA:-0.194420453114;LEF1_TCF7_TCF7L1,2:-0.202284195576;FOS_FOS{B,L1}_JUN{B,D}:-0.227273525939;BACH2:-0.23098474345;GATA4:-0.236058786044;PAX4:-0.23669182347;SOX17:-0.23902886034;PRDM1:-0.272615062497;TBX4,5:-0.276484910769;ZNF384:-0.295976053669;NANOG:-0.305426916349;RREB1:-0.306895424602;TOPORS:-0.327128554861;XCPE1{core}:-0.327690144765;NFATC1..3:-0.331199736711;SRF:-0.332759821082;ZNF148:-0.353376468178;MYBL2:-0.368672438789;JUN:-0.376356026453;PAX2:-0.40020362717;GTF2A1,2:-0.402990871216;ALX4:-0.420401669375;HOX{A5,B5}:-0.422749558601;MYFfamily:-0.423453957853;GTF2I:-0.432466663175;MZF1:-0.449215057324;ELF1,2,4:-0.453269034359;AR:-0.462471596571;TP53:-0.480206972056;TAL1_TCF{3,4,12}:-0.481570914614;GFI1:-0.491731139872;POU2F1..3:-0.49224242729;XBP1:-0.533045463838;MTF1:-0.536063302386;ZBTB6:-0.544080305271;HIF1A:-0.546228331076;MAFB:-0.554877447781;PAX6:-0.556487060102;DMAP1_NCOR{1,2}_SMARC:-0.564879840827;TGIF1:-0.568290286994;HSF1,2:-0.622670264448;SPI1:-0.624980563861;FOXO1,3,4:-0.639419417354;REST:-0.639510263124;NANOG{mouse}:-0.656984980102;TFCP2:-0.664053537358;HBP1_HMGB_SSRP1_UBTF:-0.668852487771;SPIB:-0.678646148543;PPARG:-0.69114009594;RXRA_VDR{dimer}:-0.694807227587;NR3C1:-0.705982939211;KLF4:-0.715446682305;FOXM1:-0.733337191141;RUNX1..3:-0.748189581094;ESR1:-0.762086840558;CREB1:-0.77264805085;ETS1,2:-0.792052672555;ARID5B:-0.793448597875;ZIC1..3:-0.815885506233;SPZ1:-0.838544328268;ATF6:-0.880169983043;TFAP4:-0.887130768549;NFE2L1:-0.900093414758;ZNF423:-0.947378116655;ALX1:-1.03042557965;NKX2-2,8:-1.1124202121;PAX3,7:-1.13740652235;SMAD1..7,9:-1.20469232486;ZNF238:-1.30929113199;POU3F1..4:-1.32981390729;GCM1,2:-1.40672313649;HMX1:-1.44265031542;TLX2:-1.48144590085;GZF1:-1.50837498891;GLI1..3:-1.56360152494
|top_motifs=HNF1A:3.68810866596;FOXQ1:2.50479712587;FOXD3:2.32699312722;ONECUT1,2:2.22184601046;ADNP_IRX_SIX_ZHX:2.00853097422;HNF4A_NR2F1,2:2.0028509829;FOXA2:1.7555617709;HOX{A6,A7,B6,B7}:1.72523561611;NR6A1:1.70665555788;AIRE:1.68106855961;NKX2-1,4:1.3937918511;T:1.37241876422;bHLH_family:1.21684780571;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.15265937972;DBP:1.1057026607;FOX{D1,D2}:1.09114724554;RORA:1.01513378726;NFE2L2:0.995691908652;CUX2:0.969203082386;POU6F1:0.954321163959;FOX{F1,F2,J1}:0.94907724752;EN1,2:0.854702615088;CEBPA,B_DDIT3:0.824771265751;STAT5{A,B}:0.802091078077;TEF:0.792641936231;ZBTB16:0.776397991976;NKX3-1:0.732720695823;CDX1,2,4:0.666859157585;PAX8:0.63671778062;PITX1..3:0.623502391548;ZEB1:0.62198562414;SOX2:0.609594289166;GATA6:0.604668073201;ELK1,4_GABP{A,B1}:0.601308954158;CRX:0.600618482819;ZNF143:0.584002621348;FOXP1:0.564696350041;RBPJ:0.561799743225;NKX3-2:0.559577682266;MYOD1:0.55728653626;SOX5:0.556127547521;NFY{A,B,C}:0.529035479456;HOX{A4,D4}:0.524711572098;FOX{I1,J2}:0.516745519107;TFAP2B:0.490457297065;HMGA1,2:0.488576987653;PBX1:0.476136713615;TFDP1:0.468782078554;EBF1:0.468619994676;PAX1,9:0.460111910273;EVI1:0.456996983344;TLX1..3_NFIC{dimer}:0.451767911007;LHX3,4:0.441091825545;RFX1:0.43449228103;E2F1..5:0.433270695952;HIC1:0.430179630745;NFE2:0.426918909814;NR1H4:0.422559740824;BPTF:0.390925991804;NKX6-1,2:0.383988978043;MED-1{core}:0.383826869549;ATF2:0.350591138925;YY1:0.345063449077;RXR{A,B,G}:0.340607823164;ZFP161:0.328088217275;ESRRA:0.309998117102;SNAI1..3:0.302287857952;NKX2-3_NKX2-5:0.298635565518;RFX2..5_RFXANK_RFXAP:0.277687525988;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.276939611743;HOXA9_MEIS1:0.269927412977;ATF4:0.263761321943;EP300:0.245840226007;OCT4_SOX2{dimer}:0.227934745231;BREu{core}:0.226535949889;STAT1,3:0.222428699369;IKZF2:0.217282747826;STAT2,4,6:0.213151271482;PDX1:0.209355173672;FOXL1:0.203196917986;AHR_ARNT_ARNT2:0.191817878366;TBP:0.176110105208;PATZ1:0.174490877854;MTE{core}:0.162839017364;IRF7:0.149943407504;MYB:0.137889134099;VSX1,2:0.136989306161;POU5F1:0.106758676688;SOX{8,9,10}:0.0893849395567;GFI1B:0.0651055612608;FOXN1:0.0626610073406;FOXP3:0.0574483536236;POU1F1:0.056616586565;EGR1..3:0.053943643145;NFIL3:0.0308014502709;TFAP2{A,C}:0.0279340810417;TEAD1:0.0183166659152;HAND1,2:-0.0115941272542;MEF2{A,B,C,D}:-0.0438306191817;CDC5L:-0.0460415151232;FOSL2:-0.049069155126;HES1:-0.0618051377042;LMO2:-0.0636065258741;PAX5:-0.0771020307972;NR5A1,2:-0.0787114045118;IKZF1:-0.0909366643272;IRF1,2:-0.0976633880526;NFIX:-0.0992032652253;HLF:-0.120358880744;SREBF1,2:-0.12358381392;NHLH1,2:-0.130199960619;PRRX1,2:-0.148820793656;MAZ:-0.174696359132;NRF1:-0.176055549465;ATF5_CREB3:-0.177864153207;UFEwm:-0.188387333891;SP1:-0.192237197291;NFKB1_REL_RELA:-0.194420453114;LEF1_TCF7_TCF7L1,2:-0.202284195576;FOS_FOS{B,L1}_JUN{B,D}:-0.227273525939;BACH2:-0.23098474345;GATA4:-0.236058786044;PAX4:-0.23669182347;SOX17:-0.23902886034;PRDM1:-0.272615062497;TBX4,5:-0.276484910769;ZNF384:-0.295976053669;NANOG:-0.305426916349;RREB1:-0.306895424602;TOPORS:-0.327128554861;XCPE1{core}:-0.327690144765;NFATC1..3:-0.331199736711;SRF:-0.332759821082;ZNF148:-0.353376468178;MYBL2:-0.368672438789;JUN:-0.376356026453;PAX2:-0.40020362717;GTF2A1,2:-0.402990871216;ALX4:-0.420401669375;HOX{A5,B5}:-0.422749558601;MYFfamily:-0.423453957853;GTF2I:-0.432466663175;MZF1:-0.449215057324;ELF1,2,4:-0.453269034359;AR:-0.462471596571;TP53:-0.480206972056;TAL1_TCF{3,4,12}:-0.481570914614;GFI1:-0.491731139872;POU2F1..3:-0.49224242729;XBP1:-0.533045463838;MTF1:-0.536063302386;ZBTB6:-0.544080305271;HIF1A:-0.546228331076;MAFB:-0.554877447781;PAX6:-0.556487060102;DMAP1_NCOR{1,2}_SMARC:-0.564879840827;TGIF1:-0.568290286994;HSF1,2:-0.622670264448;SPI1:-0.624980563861;FOXO1,3,4:-0.639419417354;REST:-0.639510263124;NANOG{mouse}:-0.656984980102;TFCP2:-0.664053537358;HBP1_HMGB_SSRP1_UBTF:-0.668852487771;SPIB:-0.678646148543;PPARG:-0.69114009594;RXRA_VDR{dimer}:-0.694807227587;NR3C1:-0.705982939211;KLF4:-0.715446682305;FOXM1:-0.733337191141;RUNX1..3:-0.748189581094;ESR1:-0.762086840558;CREB1:-0.77264805085;ETS1,2:-0.792052672555;ARID5B:-0.793448597875;ZIC1..3:-0.815885506233;SPZ1:-0.838544328268;ATF6:-0.880169983043;TFAP4:-0.887130768549;NFE2L1:-0.900093414758;ZNF423:-0.947378116655;ALX1:-1.03042557965;NKX2-2,8:-1.1124202121;PAX3,7:-1.13740652235;SMAD1..7,9:-1.20469232486;ZNF238:-1.30929113199;POU3F1..4:-1.32981390729;GCM1,2:-1.40672313649;HMX1:-1.44265031542;TLX2:-1.48144590085;GZF1:-1.50837498891;GLI1..3:-1.56360152494
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10484-107A7;search_select_hide=table117:FF:10484-107A7
}}
}}

Latest revision as of 14:26, 3 June 2020

Name:hepatoma cell line:Li-7
Species:Human (Homo sapiens)
Library ID:CNhs11271
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueliver
dev stageNA
sexmale
age45
cell typehepatocyte
cell lineLi-7
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005006
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11271 CAGE DRX007908 DRR008780
Accession ID Hg19

Library idBAMCTSS
CNhs11271 DRZ000205 DRZ001590
Accession ID Hg38

Library idBAMCTSS
CNhs11271 DRZ011555 DRZ012940
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.168
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.0408
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.787
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.00132
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0771
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.165
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.157
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.178
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.00622
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0924
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0767
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.182
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11271

Jaspar motifP-value
MA0002.20.00251
MA0003.10.468
MA0004.10.237
MA0006.10.921
MA0007.10.119
MA0009.10.895
MA0014.10.823
MA0017.10.0242
MA0018.20.207
MA0019.10.497
MA0024.10.021
MA0025.10.776
MA0027.10.881
MA0028.10.114
MA0029.10.698
MA0030.10.0428
MA0031.19.21611e-4
MA0035.20.154
MA0038.10.136
MA0039.20.00703
MA0040.10.82
MA0041.10.616
MA0042.10.469
MA0043.10.119
MA0046.11.43665e-85
MA0047.23.94401e-8
MA0048.10.263
MA0050.10.867
MA0051.10.698
MA0052.10.00804
MA0055.10.183
MA0057.10.347
MA0058.10.448
MA0059.10.806
MA0060.10.00252
MA0061.10.00286
MA0062.20.858
MA0065.20.044
MA0066.10.154
MA0067.10.473
MA0068.10.353
MA0069.10.226
MA0070.10.457
MA0071.10.822
MA0072.10.398
MA0073.10.255
MA0074.10.352
MA0076.10.129
MA0077.10.0472
MA0078.10.531
MA0079.20.0939
MA0080.21.86567e-9
MA0081.10.0173
MA0083.10.635
MA0084.10.871
MA0087.10.606
MA0088.10.884
MA0090.10.687
MA0091.10.191
MA0092.10.251
MA0093.10.228
MA0099.20.0612
MA0100.10.297
MA0101.10.28
MA0102.20.0805
MA0103.10.0262
MA0104.20.23
MA0105.12.4317e-4
MA0106.10.215
MA0107.10.0639
MA0108.20.398
MA0111.10.396
MA0112.20.0962
MA0113.10.0892
MA0114.16.8577e-6
MA0115.10.0606
MA0116.19.12658e-4
MA0117.10.126
MA0119.10.493
MA0122.10.69
MA0124.10.365
MA0125.10.00482
MA0131.10.318
MA0135.10.167
MA0136.13.42038e-7
MA0137.20.577
MA0138.20.00646
MA0139.10.0738
MA0140.10.159
MA0141.10.867
MA0142.10.0786
MA0143.10.634
MA0144.10.645
MA0145.10.299
MA0146.10.138
MA0147.10.491
MA0148.13.67732e-6
MA0149.10.974
MA0150.10.331
MA0152.10.693
MA0153.13.41215e-62
MA0154.10.0676
MA0155.10.762
MA0156.16.00061e-5
MA0157.10.0768
MA0159.10.12
MA0160.10.743
MA0162.10.532
MA0163.10.00613
MA0164.10.51
MA0258.10.158
MA0259.10.751



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11271

Novel motifP-value
10.564
100.55
1000.0805
1010.131
1020.0628
1030.34
1040.513
1050.662
1060.922
1070.418
1080.564
1090.0711
110.0121
1100.156
1110.477
1120.375
1136.95257e-4
1140.234
1150.598
1160.246
1170.118
1180.278
1190.965
120.172
1200.721
1210.0354
1220.706
1230.831
1240.304
1250.846
1260.411
1270.0141
1280.00547
1290.605
130.45
1300.897
1310.242
1320.271
1330.479
1340.53
1350.179
1360.0825
1370.195
1380.879
1390.513
140.512
1400.313
1410.149
1420.89
1431.42638e-4
1440.769
1450.514
1460.573
1470.223
1480.346
1490.605
150.493
1500.839
1510.608
1520.809
1530.111
1540.41
1550.542
1560.389
1570.305
1580.256
1590.836
160.286
1600.055
1610.849
1620.973
1630.21
1640.921
1650.749
1660.348
1670.36
1680.4
1690.0865
170.389
180.407
190.199
20.19
200.029
210.485
220.0657
230.379
240.697
250.435
260.532
270.0165
280.687
290.332
30.14
300.357
310.964
322.80139e-4
330.603
340.333
350.899
360.628
370.247
380.457
390.652
40.336
400.708
410.00385
420.353
430.123
440.974
450.832
460.476
470.418
480.214
490.32
50.476
500.977
510.0874
520.916
530.451
540.83
550.362
560.817
570.75
580.305
590.0798
60.565
600.71
610.975
620.0585
630.784
640.436
650.172
660.138
670.0162
680.172
690.757
70.304
700.397
710.161
720.277
730.621
740.579
750.819
760.727
770.568
780.128
790.00296
80.67
800.294
810.573
820.0117
830.384
840.579
850.271
860.445
870.434
880.973
890.112
90.00778
900.927
910.107
920.534
930.939
940.0834
950.324
960.326
970.867
980.247
990.626



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11271


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000181 (metabolising cell)
0000417 (endopolyploid cell)
0000668 (parenchymal cell)
0000412 (polyploid cell)
0000255 (eukaryotic cell)
0000182 (hepatocyte)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
7 (disease of anatomical entity)
305 (carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002107 (liver)
0002100 (trunk)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0002365 (exocrine gland)
0005172 (abdomen element)
0006925 (digestive gland)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0002330 (exocrine system)
0000916 (abdomen)
0002423 (hepatobiliary system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100224 (liver cell line sample)
0100578 (hepatoma cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000223 (endodermal cell)
UBERON:0001041 (foregut)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0003104 (mesenchyme)
UBERON:0004161 (septum transversum)
UBERON:0009497 (epithelium of foregut-midgut junction)
UBERON:0010316 (germ layer / neural crest)

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