DOID:162
From FANTOM5_SSTAR
| Name: | cancer | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "A disease of cellular proliferation that is malignant and primary, characterized by uncontrolled cellular proliferation, local cell invasion and metastasis." [stedman:rlc, url:http://en.wikipedia.org/wiki/cancer, url:http://www2.merriam-webster.com/cgi-bin/mwmednlm?book | |
| Xrefs: |
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| Synonyms: |
"malignant neoplasm" EXACT [] "malignant tumor " EXACT [] "primary cancer" EXACT [] |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:14566(disease of cellular proliferation) |
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Children
| is a: | DOID:0050686 (organ system cancer),DOID:0050687 (cell type cancer) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10412-106B7 (malignant trichilemmal cyst cell line:DJM-1)
- 10413-106B8 (glioma cell line:GI-1)
- 10414-106B9 (maxillary sinus tumor cell line:HSQ-89)
... further results Mouse (Mus musculus)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10412-106B7 (malignant trichilemmal cyst cell line:DJM-1)
- 10413-106B8 (glioma cell line:GI-1)
- 10414-106B9 (maxillary sinus tumor cell line:HSQ-89)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:162 (cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
