UBERON:0002530
From FANTOM5_SSTAR
Name: | gland | |
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Namespace: | FANTOM | |
Definition: | "A gland is an organ in an animal's body that synthesizes a substance for release such as hormones or breast milk, often into the bloodstream (endocrine gland) or into cavities inside the body or its outer surface (exocrine gland). A gland is an organ specialised for secretion[GO]." [Wikipedia:Gland] | |
Xrefs: |
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Synonyms: |
"Druese" RELATED [BTO:0000522] "glandula" RELATED LATIN [Wikipedia:Gland] "glandula" RELATED [BTO:0000522] | |
Comments: | none of the major model vertebrate ontologies have a class called gland. Is this class superfluous? Also GO says secretion by tissue. | |
Alt_id: | UBERON:MIAA_0000021 | |
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000062(organ) |
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Children
is a: | UBERON:0002365 (exocrine gland),UBERON:0002368 (endocrine gland),UBERON:0003296 (gland of diencephalon),UBERON:0003297 (gland of integumental system),UBERON:0003408 (gland of gut),UBERON:0003937 (sex gland),UBERON:0005058 (hemolymphoid system gland) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10018-101C9 (liver, adult, pool1)
- 10022-101D4 (prostate, adult, pool1)
- 10027-101D9 (thymus, adult, pool1)
- 10028-101E1 (thyroid, adult, pool1)
- 10043-101F7 (thymus, fetal, pool1)
- 10060-101H6 (thyroid, fetal, donor1)
- 10081-102A9 (adrenal gland, adult, pool1)
- 10086-102B5 (liver, fetal, pool1)
- 10089-102B8
- 10092-102C2
... further results Mouse (Mus musculus)
- 10018-101C9 (liver, adult, pool1)
- 10022-101D4 (prostate, adult, pool1)
- 10027-101D9 (thymus, adult, pool1)
- 10028-101E1 (thyroid, adult, pool1)
- 10043-101F7 (thymus, fetal, pool1)
- 10060-101H6 (thyroid, fetal, donor1)
- 10081-102A9 (adrenal gland, adult, pool1)
- 10086-102B5 (liver, fetal, pool1)
- 10089-102B8
- 10092-102C2
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002530 (gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data