FFCP PHASE1:Hg19::chr17:46675608..46675618,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3216 | |EntrezGene=3216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5117 | |HGNC=5117 | ||
|TSSclassifier=strong | |||
|UniProt=P17509 | |UniProt=P17509 | ||
|association_with_transcript=462bp_to_uc002int.1_5end | |association_with_transcript=462bp_to_uc002int.1_5end | ||
|cluster_id=chr17:46675608..46675618,- | |||
|description=CAGE_peak_10_at_HOXB6_5end | |description=CAGE_peak_10_at_HOXB6_5end | ||
|id=chr17:46675608..46675618,- | |id=chr17:46675608..46675618,- | ||
|ontology_enrichment_celltype=CL:1000449;4.34e-24;15!CL:0002681;2.40e-22;12!CL:0002584;2.40e-22;12!CL:1000497;3.63e-21;17!CL:0002518;3.63e-21;17!CL:1000746;1.67e-17;7!CL:1000612;1.67e-17;7!CL:0002188;2.38e-14;5!CL:1000507;2.06e-12;10!CL:1000494;2.06e-12;10!CL:0000239;2.80e-11;3!CL:1000615;2.80e-11;3!CL:0002306;2.80e-11;3!CL:0002553;4.34e-09;1!CL:0000167;1.13e-08;1!CL:0000164;1.13e-08;1!CL:0000502;1.13e-08;1!CL:0000172;1.13e-08;1!CL:0000173;1.13e-08;1 | |ontology_enrichment_celltype=CL:1000449!3.15e-20!16;CL:0002681!4.02e-19!13;CL:0002584!4.02e-19!13;CL:1000497!2.11e-17!18;CL:0002518!2.11e-17!18;CL:1000507!1.01e-14!12;CL:1000494!1.01e-14!12;CL:1000612!3.44e-11!7;CL:1000746!3.44e-11!7;CL:0002078!9.47e-08!44;CL:0000666!3.47e-07!4;CL:0002188!3.47e-07!4;CL:0000066!6.77e-07!254 | ||
| | |ontology_enrichment_celltype_v019=CL:1000449;4.34e-24;15!CL:0002681;2.40e-22;12!CL:0002584;2.40e-22;12!CL:1000497;3.63e-21;17!CL:0002518;3.63e-21;17!CL:1000746;1.67e-17;7!CL:1000612;1.67e-17;7!CL:0002188;2.38e-14;5!CL:1000507;2.06e-12;10!CL:1000494;2.06e-12;10!CL:0000239;2.80e-11;3!CL:1000615;2.80e-11;3!CL:0002306;2.80e-11;3!CL:0002553;4.34e-09;1!CL:0000167;1.13e-08;1!CL:0000164;1.13e-08;1!CL:0000502;1.13e-08;1!CL:0000172;1.13e-08;1!CL:0000173;1.13e-08;1 | ||
|ontology_enrichment_disease=DOID:4430;1.13e-08;1 | |ontology_enrichment_celltype_v019_2=CL:1000449,7.58e-24,15;CL:0002681,4.78e-22,12;CL:0002584,4.78e-22,12;CL:1000497,5.93e-21,17;CL:0002518,5.93e-21,17;CL:1000746,3.52e-17,7;CL:1000612,3.52e-17,7;CL:0002188,3.50e-14,5;CL:1000507,2.58e-12,10;CL:1000494,2.58e-12,10;CL:0000239,2.96e-11,3;CL:1000615,2.96e-11,3;CL:0002306,2.96e-11,3;CL:0002553,4.19e-09,1;CL:0000167,1.22e-08,1;CL:0000164,1.22e-08,1;CL:0000502,1.22e-08,1;CL:0000172,1.22e-08,1;CL:0000173,1.22e-08,1;CL:0002351,1.22e-08,1 | ||
|ontology_enrichment_uberon=UBERON:0006555;4.34e-24;15!UBERON:0004819;4.34e-24;15!UBERON:0001285;4.34e-24;15!UBERON:0007684;4.34e-24;15!UBERON:0000353;6.68e-24;15!UBERON:0001225;2.40e-22;12!UBERON:0008987;2.40e-22;12!UBERON:0000489;1.11e-19;29!UBERON:0002113;4.16e-19;24!UBERON:0011143;4.16e-19;24!UBERON:0001851;8.68e-18;15!UBERON:0000074;1.67e-17;7!UBERON:0001229;1.67e-17;7!UBERON:0006554;4.55e-15;30!UBERON:0001008;4.55e-15;30!UBERON:0004211;2.06e-12;10!UBERON:0009773;2.06e-12;10!UBERON:0001231;2.06e-12;10!UBERON:0004810;2.06e-12;10!UBERON:0006853;2.80e-11;3!UBERON:0007685;2.80e-11;3!UBERON:0004134;2.80e-11;3!UBERON:0006947;5.27e-11;3!UBERON:0004054;5.27e-11;3!UBERON:0001000;4.34e-09;1!UBERON:0005352;4.34e-09;1!UBERON:0004175;8.85e-09;21!UBERON:0001301;1.13e-08;1!UBERON:0007195;1.13e-08;1!UBERON:0005904;1.81e-08;4!UBERON:0005172;2.02e-07;52!UBERON:0005173;2.02e-07;52!UBERON:0005177;7.99e-07;99 | |ontology_enrichment_development_v019=CL:0002351;1.13e-08;1 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.13e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0006555!1.33e-21!17;UBERON:0005103!1.33e-21!17;UBERON:0000083!1.33e-21!17;UBERON:0009201!1.33e-21!17;UBERON:0004819!1.33e-21!17;UBERON:0006553!1.33e-21!17;UBERON:0003074!1.33e-21!17;UBERON:0003060!1.33e-21!17;UBERON:0002113!2.10e-20!27;UBERON:0003918!2.10e-20!27;UBERON:0005095!2.10e-20!27;UBERON:0007687!2.10e-20!27;UBERON:0000058!2.76e-20!26;UBERON:0004211!3.15e-20!16;UBERON:0001285!3.15e-20!16;UBERON:0007684!3.15e-20!16;UBERON:0003220!3.15e-20!16;UBERON:0004208!3.15e-20!16;UBERON:0003887!3.16e-20!21;UBERON:0000080!4.36e-20!18;UBERON:0002120!4.36e-20!18;UBERON:0004875!4.36e-20!18;UBERON:0005721!4.36e-20!18;UBERON:0005754!4.36e-20!18;UBERON:0007297!4.36e-20!18;UBERON:0000489!5.41e-20!32;UBERON:0001225!4.02e-19!13;UBERON:0008987!4.02e-19!13;UBERON:0000353!1.26e-18!17;UBERON:0004876!1.62e-17!20;UBERON:0006554!1.43e-15!44;UBERON:0001008!4.86e-15!45;UBERON:0001851!1.00e-14!16;UBERON:0009773!1.01e-14!12;UBERON:0001231!1.01e-14!12;UBERON:0004810!1.01e-14!12;UBERON:0002417!3.46e-13!61;UBERON:0000916!3.46e-13!61;UBERON:0003064!1.81e-12!37;UBERON:0005172!4.15e-12!55;UBERON:0005173!4.15e-12!55;UBERON:0005177!3.04e-11!107;UBERON:0000074!3.44e-11!7;UBERON:0001229!3.44e-11!7;UBERON:0001230!3.44e-11!7;UBERON:0005749!3.44e-11!7;UBERON:0004199!3.44e-11!7;UBERON:0004209!3.44e-11!7;UBERON:0004198!3.44e-11!7;UBERON:0002100!9.37e-10!216;UBERON:0009569!4.31e-09!113;UBERON:0003886!1.24e-08!63;UBERON:0003103!3.18e-08!69;UBERON:0000464!5.87e-08!104;UBERON:0000466!9.10e-08!126;UBERON:0003104!1.33e-07!238;UBERON:0009142!1.33e-07!238;UBERON:0005256!2.33e-07!143;UBERON:0002553!4.59e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.34e-24;15!UBERON:0004819;4.34e-24;15!UBERON:0001285;4.34e-24;15!UBERON:0007684;4.34e-24;15!UBERON:0000353;6.68e-24;15!UBERON:0001225;2.40e-22;12!UBERON:0008987;2.40e-22;12!UBERON:0000489;1.11e-19;29!UBERON:0002113;4.16e-19;24!UBERON:0011143;4.16e-19;24!UBERON:0001851;8.68e-18;15!UBERON:0000074;1.67e-17;7!UBERON:0001229;1.67e-17;7!UBERON:0006554;4.55e-15;30!UBERON:0001008;4.55e-15;30!UBERON:0004211;2.06e-12;10!UBERON:0009773;2.06e-12;10!UBERON:0001231;2.06e-12;10!UBERON:0004810;2.06e-12;10!UBERON:0006853;2.80e-11;3!UBERON:0007685;2.80e-11;3!UBERON:0004134;2.80e-11;3!UBERON:0006947;5.27e-11;3!UBERON:0004054;5.27e-11;3!UBERON:0001000;4.34e-09;1!UBERON:0005352;4.34e-09;1!UBERON:0004175;8.85e-09;21!UBERON:0001301;1.13e-08;1!UBERON:0007195;1.13e-08;1!UBERON:0005904;1.81e-08;4!UBERON:0005172;2.02e-07;52!UBERON:0005173;2.02e-07;52!UBERON:0005177;7.99e-07;99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,7.57e-29,16;UBERON:0004819,7.57e-29,16;UBERON:0004211,7.58e-24,15;UBERON:0009773,7.58e-24,15;UBERON:0001231,7.58e-24,15;UBERON:0001285,7.58e-24,15;UBERON:0007684,7.58e-24,15;UBERON:0004208,7.58e-24,15;UBERON:0000353,1.19e-23,15;UBERON:0005103,7.19e-23,8;UBERON:0000083,7.19e-23,8;UBERON:0009201,7.19e-23,8;UBERON:0006553,7.19e-23,8;UBERON:0003074,7.19e-23,8;UBERON:0003060,7.19e-23,8;UBERON:0000489,1.95e-22,31;UBERON:0001225,4.78e-22,12;UBERON:0008987,4.78e-22,12;UBERON:0002113,6.88e-22,26;UBERON:0003918,6.88e-22,26;UBERON:0011143,6.88e-22,26;UBERON:0005095,6.88e-22,26;UBERON:0007687,6.88e-22,26;UBERON:0000080,2.54e-20,9;UBERON:0002120,2.54e-20,9;UBERON:0004875,2.54e-20,9;UBERON:0005721,2.54e-20,9;UBERON:0005754,2.54e-20,9;UBERON:0007297,2.54e-20,9;UBERON:0000058,2.56e-18,19;UBERON:0001851,1.50e-17,15;UBERON:0010532,3.52e-17,7;UBERON:0000074,3.52e-17,7;UBERON:0001229,3.52e-17,7;UBERON:0001230,3.52e-17,7;UBERON:0003220,3.52e-17,7;UBERON:0005749,3.52e-17,7;UBERON:0004199,3.52e-17,7;UBERON:0004209,3.52e-17,7;UBERON:0004198,3.52e-17,7;UBERON:0004876,1.31e-16,11;UBERON:0003887,3.25e-15,12;UBERON:0005177,1.08e-13,101;UBERON:0004810,2.58e-12,10;UBERON:0005172,3.66e-12,54;UBERON:0005173,3.66e-12,54;UBERON:0006554,1.68e-11,47;UBERON:0006853,2.96e-11,3;UBERON:0007685,2.96e-11,3;UBERON:0004134,2.96e-11,3;UBERON:0001008,3.12e-11,48;UBERON:0006947,6.95e-11,3;UBERON:0004054,6.95e-11,3;UBERON:0002417,8.79e-11,60;UBERON:0000916,8.79e-11,60;UBERON:0009569,2.17e-10,112;UBERON:0003103,2.44e-09,68;UBERON:0001000,4.52e-09,1;UBERON:0005352,4.52e-09,1;UBERON:0007195,1.42e-08,1;UBERON:0001301,1.65e-08,1;UBERON:0005904,2.23e-08,4;UBERON:0004175,2.23e-07,25 | |||
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| ||
|short_description=p10@HOXB6 | |short_description=p10@HOXB6 | ||
}} | }} |
Latest revision as of 07:23, 25 September 2015
Short description: | p10@HOXB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HOXB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 462bp_to_uc002int.1_5end |
EntrezGene: | HOXB6 |
HGNC: | 5117 |
UniProt: | P17509 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 7.58e-24 | 15 |
kidney cortical cell | 4.78e-22 | 12 |
renal cortical epithelial cell | 4.78e-22 | 12 |
kidney cell | 5.93e-21 | 17 |
kidney epithelial cell | 5.93e-21 | 17 |
glomerular cell | 3.52e-17 | 7 |
kidney corpuscule cell | 3.52e-17 | 7 |
glomerular endothelial cell | 3.50e-14 | 5 |
kidney tubule cell | 2.58e-12 | 10 |
nephron tubule epithelial cell | 2.58e-12 | 10 |
brush border epithelial cell | 2.96e-11 | 3 |
kidney cortex tubule cell | 2.96e-11 | 3 |
epithelial cell of proximal tubule | 2.96e-11 | 3 |
lung fibroblast | 4.19e-09 | 1 |
peptide hormone secreting cell | 1.22e-08 | 1 |
enteroendocrine cell | 1.22e-08 | 1 |
type D enteroendocrine cell | 1.22e-08 | 1 |
somatostatin secreting cell | 1.22e-08 | 1 |
pancreatic D cell | 1.22e-08 | 1 |
progenitor cell of endocrine pancreas | 1.22e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.22e-08 | 1 |