FFCP PHASE1:Hg19::chr17:46675558..46675577,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3216 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5117 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-46bp_to_AB464576,CU677079,DQ890732,HQ447184_5end | |||
|cluster_id=chr17:46675558..46675577,- | |||
|coexpression_cluster_id=C3645 | |||
|description=CAGE_peak_2_at_HOXB6_5end | |||
|id=chr17:46675558..46675577,- | |||
|ontology_enrichment_celltype=CL:1000449!4.07e-13!16;CL:1000497!3.22e-12!18;CL:0002518!3.22e-12!18;CL:0002681!5.95e-11!13;CL:0002584!5.95e-11!13;CL:1000507!3.14e-10!12;CL:1000494!3.14e-10!12;CL:0000222!1.35e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.00e-18;15!CL:1000497;2.60e-17;17!CL:0002518;2.60e-17;17!CL:0002681;6.73e-15;12!CL:0002584;6.73e-15;12!CL:1000507;1.52e-12;10!CL:1000494;1.52e-12;10!CL:1000746;4.36e-09;7!CL:1000612;4.36e-09;7!CL:0002188;2.47e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.97e-18,15;CL:1000497,2.67e-17,17;CL:0002518,2.67e-17,17;CL:0002681,6.71e-15,12;CL:0002584,6.71e-15,12;CL:1000507,1.45e-12,10;CL:1000494,1.45e-12,10;CL:1000746,4.16e-09,7;CL:1000612,4.16e-09,7;CL:0002188,2.57e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.21e-18!216;UBERON:0000489!5.76e-17!32;UBERON:0000080!8.35e-15!18;UBERON:0002120!8.35e-15!18;UBERON:0004875!8.35e-15!18;UBERON:0005721!8.35e-15!18;UBERON:0005754!8.35e-15!18;UBERON:0007297!8.35e-15!18;UBERON:0002113!1.23e-14!27;UBERON:0003918!1.23e-14!27;UBERON:0005095!1.23e-14!27;UBERON:0007687!1.23e-14!27;UBERON:0006555!6.16e-14!17;UBERON:0005103!6.16e-14!17;UBERON:0000083!6.16e-14!17;UBERON:0009201!6.16e-14!17;UBERON:0004819!6.16e-14!17;UBERON:0006553!6.16e-14!17;UBERON:0003074!6.16e-14!17;UBERON:0003060!6.16e-14!17;UBERON:0003887!9.58e-14!21;UBERON:0000058!1.82e-13!26;UBERON:0005177!1.88e-13!107;UBERON:0003104!3.18e-13!238;UBERON:0009142!3.18e-13!238;UBERON:0005256!3.72e-13!143;UBERON:0004211!4.07e-13!16;UBERON:0001285!4.07e-13!16;UBERON:0007684!4.07e-13!16;UBERON:0003220!4.07e-13!16;UBERON:0004208!4.07e-13!16;UBERON:0004876!2.03e-12!20;UBERON:0002417!3.92e-12!61;UBERON:0000916!3.92e-12!61;UBERON:0001008!9.08e-12!45;UBERON:0006554!2.14e-11!44;UBERON:0009569!2.25e-11!113;UBERON:0003914!5.82e-11!118;UBERON:0001225!5.95e-11!13;UBERON:0008987!5.95e-11!13;UBERON:0005172!1.41e-10!55;UBERON:0005173!1.41e-10!55;UBERON:0003886!2.37e-10!63;UBERON:0009773!3.14e-10!12;UBERON:0001231!3.14e-10!12;UBERON:0004810!3.14e-10!12;UBERON:0000353!7.68e-10!17;UBERON:0000466!9.46e-10!126;UBERON:0003064!8.46e-09!37;UBERON:0000464!1.21e-08!104;UBERON:0001851!1.33e-08!16;UBERON:0002553!7.50e-08!70;UBERON:0000926!2.60e-07!448;UBERON:0004120!2.60e-07!448;UBERON:0006603!2.60e-07!448;UBERON:0000490!2.63e-07!138;UBERON:0000055!3.13e-07!69;UBERON:0004290!4.36e-07!70;UBERON:0001135!4.95e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;3.83e-20;29!UBERON:0006555;3.00e-18;15!UBERON:0004819;3.00e-18;15!UBERON:0001285;3.00e-18;15!UBERON:0007684;3.00e-18;15!UBERON:0002113;7.23e-18;24!UBERON:0011143;7.23e-18;24!UBERON:0006554;7.52e-16;30!UBERON:0001008;7.52e-16;30!UBERON:0000353;3.33e-15;15!UBERON:0001225;6.73e-15;12!UBERON:0008987;6.73e-15;12!UBERON:0004211;1.52e-12;10!UBERON:0009773;1.52e-12;10!UBERON:0001231;1.52e-12;10!UBERON:0004810;1.52e-12;10!UBERON:0001851;3.89e-11;15!UBERON:0000074;4.36e-09;7!UBERON:0001229;4.36e-09;7!UBERON:0002417;1.15e-08;58!UBERON:0000916;1.15e-08;58!UBERON:0005172;1.36e-07;52!UBERON:0005173;1.36e-07;52!UBERON:0011135;2.65e-07;5!UBERON:0002216;2.65e-07;5!UBERON:0011134;2.65e-07;5!UBERON:0002209;2.65e-07;5!UBERON:0002213;2.65e-07;5!UBERON:0007844;2.65e-07;5!UBERON:0011138;2.65e-07;5!UBERON:0001130;2.65e-07;5!UBERON:0001066;2.65e-07;5!UBERON:0001468;2.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.43e-22,31;UBERON:0002113,2.54e-20,26;UBERON:0003918,2.54e-20,26;UBERON:0011143,2.54e-20,26;UBERON:0005095,2.54e-20,26;UBERON:0007687,2.54e-20,26;UBERON:0006555,1.59e-19,16;UBERON:0004819,1.59e-19,16;UBERON:0004211,2.97e-18,15;UBERON:0009773,2.97e-18,15;UBERON:0001231,2.97e-18,15;UBERON:0001285,2.97e-18,15;UBERON:0007684,2.97e-18,15;UBERON:0004208,2.97e-18,15;UBERON:0003104,7.38e-17,160;UBERON:0009142,7.38e-17,160;UBERON:0002417,2.84e-15,60;UBERON:0000916,2.84e-15,60;UBERON:0000353,3.03e-15,15;UBERON:0001225,6.71e-15,12;UBERON:0008987,6.71e-15,12;UBERON:0002100,1.36e-14,199;UBERON:0000058,2.27e-13,19;UBERON:0001008,2.92e-13,48;UBERON:0005172,9.58e-13,54;UBERON:0005173,9.58e-13,54;UBERON:0006554,9.89e-13,47;UBERON:0004810,1.45e-12,10;UBERON:0000080,1.04e-11,9;UBERON:0002120,1.04e-11,9;UBERON:0004875,1.04e-11,9;UBERON:0005721,1.04e-11,9;UBERON:0005754,1.04e-11,9;UBERON:0007297,1.04e-11,9;UBERON:0005177,1.83e-11,101;UBERON:0009569,2.21e-11,112;UBERON:0001851,3.88e-11,15;UBERON:0005103,2.26e-10,8;UBERON:0000083,2.26e-10,8;UBERON:0009201,2.26e-10,8;UBERON:0006553,2.26e-10,8;UBERON:0003074,2.26e-10,8;UBERON:0003060,2.26e-10,8;UBERON:0003887,1.29e-09,12;UBERON:0010532,4.16e-09,7;UBERON:0000074,4.16e-09,7;UBERON:0001229,4.16e-09,7;UBERON:0001230,4.16e-09,7;UBERON:0003220,4.16e-09,7;UBERON:0005749,4.16e-09,7;UBERON:0004199,4.16e-09,7;UBERON:0004209,4.16e-09,7;UBERON:0004198,4.16e-09,7;UBERON:0004876,4.21e-09,11;UBERON:0005256,7.82e-09,122;UBERON:0007503,7.20e-08,78;UBERON:0011135,2.50e-07,5;UBERON:0002216,2.50e-07,5;UBERON:0011134,2.50e-07,5;UBERON:0002209,2.50e-07,5;UBERON:0002213,2.50e-07,5;UBERON:0005856,2.50e-07,5;UBERON:0005866,2.50e-07,5;UBERON:0005863,2.50e-07,5;UBERON:0007844,2.50e-07,5;UBERON:0011138,2.50e-07,5;UBERON:0001130,2.50e-07,5;UBERON:0001066,2.50e-07,5;UBERON:0001468,2.50e-07,5;UBERON:0003103,2.93e-07,68 | |||
|phase1_expression=0.181678379270557,1.2846031433459,1.69145284915165,0,2.23480547213644,0,2.53299878168311,2.52687949370732,4.96252693579693,24.5733936501509,11.1648186875588,0,1.31883489114227,14.8519623552056,7.29074226601415,1.34465029290355,3.61616716814386,5.84248072309899,2.92759679274304,0,0,0.626909442956176,0,0.273748850145768,0.251085279189606,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0.860234595106124,1.04142150482278,0,0,4.12677062910101,0.626984899610432,1.55050055501597,0.71153252537342,3.01248551488203,0.402829317109147,3.04108842287405,3.66093086322254,0.735326160691737,0,0.982297011124877,0.22452937262617,1.0135033243499,0,3.79706263827252,0.916008719652036,0,0,0,0,0.12663051166458,0.397227542439656,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,5.38015249986484,9.27732539285743,12.6260896607143,16.4327443841631,0,0,0,0,0,7.28129089550421,10.0606539854273,0,0,0,0,0,0,0.680593098960126,0.179389635688862,0,0,0,0.412210116953756,0,0,1.0126579934476,1.26668106709558,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0,0,1.97529702878181,0.310983165046111,0.756962552626885,0,0,1.92972281457866,2.76269842704961,3.25057549622385,0.721879481669586,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,3.69077727312324,4.20725321410337,1.6462960453256,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0.570762456703795,0,0,0,0,0.148631162288728,0,0,0,0,0,0,8.37527504423104,0.264145302039678,0.207328115540772,0.288239906833923,0,0.253991577168676,0.381988425558278,0,3.4214489204541,0.308482478109971,0.300343057843917,0.285826432630578,0,0.43596006883328,0,7.10994436667778,3.57656445851882,3.381211010224,0,0,0.257207374262142,17.0218958427934,0,0.714889968290738,0.542621605391443,4.11620168390384,0,0.710783897485092,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,1.44781306667579,0.410952645100767,0.895304816199478,0,0,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,8.58840442033979,30.0102312635806,14.377046256086,0,0,0,0,0.300946099727719,0,0,0,1.29058417979192,0,3.13281851940385,0.343143423810856,0,0,0,0,6.65741758041988,0.30239029332968,0.496215615637554,0.767309866440312,0.841980283299221,3.07533958213682,1.02341449813341,4.18220194973379,0,12.0283561166071,3.37367278094941,5.99528238900807,3.11552657510173,7.08883308605751,0.241718899183244,0,0,0,0,0.524497659837696,10.8287907097779,7.00839567650174,11.7652465376528,26.3050604375869,5.38313307353666,23.8840106548883,18.2000264645872,5.18198198645135,15.4227252690289,2.70946437543853,8.52872615553251,22.9388645740534,32.4119643482202,16.7906066041634,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.676695028044854,2.61882649094895,1.5350367472613,0.413509717453592,0,0,2.04543905798642,0.178064071293475,0,0,0,0,0.464845549297286,0.62962469366128,2.0911118104818,0.308033580176089,0.532306030317022,0.869932992075073,0,0,0,1.2655176988749,0.762520775695299,37.6169753227661,17.9734374974247,0,0.78494864019923,2.69808686374972,4.66712950551293,4.24124648444471,0.202182481573316,0,0,0,1.21856744815642,0,0,0,0,0,0,0.876901770507525,4.6302042741335,9.83842128069949,0.405820753925408,0.6196469961995,0.563391205064483,5.0193973271418,1.76848273823618,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,1.60044461320525,0.43050537267123,8.42357378338128,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0.423347165447766,0,4.21195767170188,0.228234679033192,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0.879049075631364,0,0.111443384277478,61.3734077101852,0,0,0,0,0,1.00177834520615,0,0,0.597743964753209,0.828851746593443,0,1.63629892003448,0,0,8.44762500784872,0,0,1.28236427328014,0,0,0,0,0,0,0,2.17499872630438,0,0,0.709163045303809,0,0,0.173624994933292,0,0,0,0,0,0,0,0,3.46276163267087,0,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0.995261931078505,0.619202951523374,3.05515072466813,0,0,0.104421949505455,0,0,0,0,0.19566461893209,6.06950948835232,71.8143613185891,3.62972148145992,0.30607276163049,0.063186579628488,2.70582154946087,8.29505531177977,0.664653872707185,1.323967823502,0.627865836814451,0,62.3294905805246,6.79505897764379,0,0,0,26.3837269045466,2.23581842213102,0,0,0,0.0969890164884194,0,0,1.50746117111426,0.19871461170299,0,3.51992488922645,0,0,0,0.864542502924636,10.9955132319279,8.06496489951233,0,7.70365720505682,0.235694034616795,9.92100704337382,11.5063130943567,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,3.49487848582361,0,0,0,0.492137407573744,0,0,0,0.160753148465019,0,0,0,0,0,0,16.312781410934,15.8412856167694,0,0,0.383830394638891,0,0.662091970365432,0,0,0,0,7.18381149374925,0.5746476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| |||
|short_description=p2@HOXB6 | |||
}} |
Latest revision as of 07:22, 25 September 2015
Short description: | p2@HOXB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXB6_5end |
Coexpression cluster: | C3645_ductus_seminal_alveolar_endometrial_Smooth_small_nonsmall |
Association with transcript: | -46bp_to_AB464576, CU677079, DQ890732, HQ447184_5end |
EntrezGene: | HOXB6 |
HGNC: | 5117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.97e-18 | 15 |
kidney cell | 2.67e-17 | 17 |
kidney epithelial cell | 2.67e-17 | 17 |
kidney cortical cell | 6.71e-15 | 12 |
renal cortical epithelial cell | 6.71e-15 | 12 |
kidney tubule cell | 1.45e-12 | 10 |
nephron tubule epithelial cell | 1.45e-12 | 10 |
glomerular cell | 4.16e-09 | 7 |
kidney corpuscule cell | 4.16e-09 | 7 |
glomerular endothelial cell | 2.57e-07 | 5 |