FFCP PHASE1:Hg19::chr9:71735910..71735923,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:71735910..71735923,+
|short_description=p16@TJP2
|description=CAGE_peak_16_at_TJP2_5end
|association_with_transcript=-256bp_to_NM_001170414_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9414 | |EntrezGene=9414 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11828 | |HGNC=11828 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z2R3 | |UniProt=B7Z2R3 | ||
|association_with_transcript=-256bp_to_NM_001170414_5end | |||
|cluster_id=chr9:71735910..71735923,+ | |||
|coexpression_cluster_id=C4826 | |||
|description=CAGE_peak_16_at_TJP2_5end | |||
|id=chr9:71735910..71735923,+ | |||
|ontology_enrichment_celltype=CL:1000449!8.87e-17!16;CL:0000066!1.20e-16!254;CL:1000507!1.46e-16!12;CL:1000494!1.46e-16!12;CL:1000497!1.56e-14!18;CL:0002518!1.56e-14!18;CL:0002681!1.04e-11!13;CL:0002584!1.04e-11!13;CL:0002322!9.66e-09!5;CL:0000239!2.12e-07!3;CL:1000615!2.12e-07!3;CL:0002306!2.12e-07!3;CL:0000039!4.01e-07!7;CL:0000586!4.01e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.39e-52;10!CL:1000494;3.39e-52;10!CL:1000449;3.29e-41;15!CL:1000497;4.12e-36;17!CL:0002518;4.12e-36;17!CL:0002681;1.81e-27;12!CL:0002584;1.81e-27;12!CL:0000239;3.86e-17;3!CL:1000615;3.86e-17;3!CL:0002306;3.86e-17;3!CL:0000039;1.84e-12;7!CL:0000586;1.84e-12;7!CL:0000650;3.01e-12;2!CL:1000500;3.01e-12;2!CL:1000618;3.01e-12;2!CL:1001318;3.01e-12;2!CL:0002173;3.01e-12;2!CL:1000746;1.53e-07;7!CL:1000612;1.53e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.69e-52,10;CL:1000494,2.69e-52,10;CL:1000449,3.59e-41,15;CL:1000497,4.44e-36,17;CL:0002518,4.44e-36,17;CL:0002681,2.09e-27,12;CL:0002584,2.09e-27,12;CL:0000239,3.38e-17,3;CL:1000615,3.38e-17,3;CL:0002306,3.38e-17,3;CL:0000039,2.30e-12,7;CL:0000586,2.30e-12,7;CL:0000650,3.01e-12,2;CL:1000500,3.01e-12,2;CL:1000618,3.01e-12,2;CL:1001318,3.01e-12,2;CL:0002173,3.01e-12,2;CL:0000066,1.12e-11,253;CL:1000746,1.78e-07,7;CL:1000612,1.78e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.09e-13;10!UBERON:0005564;4.09e-13;10!UBERON:0003104;7.42e-08;31 | |||
|ontology_enrichment_disease=DOID:305!4.31e-14!106;DOID:299!1.13e-10!25;DOID:0050687!3.08e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.22e-11;2!DOID:299;2.09e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.75e-11,2;DOID:299,1.94e-09,25;DOID:305,4.22e-08,106 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;3.39e-52;10!UBERON:0009773;3.39e-52;10!UBERON:0001231;3.39e-52;10!UBERON:0004810;3.39e-52;10!UBERON:0006555;3.29e-41;15!UBERON:0004819;3.29e-41;15!UBERON:0001285;3.29e-41;15!UBERON:0007684;3.29e-41;15!UBERON:0002113;4.57e-35;24!UBERON:0011143;4.57e-35;24!UBERON:0000489;1.50e-28;29!UBERON:0006554;1.65e-27;30!UBERON:0001008;1.65e-27;30!UBERON:0001225;1.81e-27;12!UBERON:0008987;1.81e-27;12!UBERON:0001851;9.78e-22;15!UBERON:0000353;9.78e-22;15!UBERON:0000160;2.11e-17;17!UBERON:0006853;3.86e-17;3!UBERON:0007685;3.86e-17;3!UBERON:0004134;3.86e-17;3!UBERON:0005409;7.56e-17;22!UBERON:0005172;5.72e-15;52!UBERON:0005173;5.72e-15;52!UBERON:0003567;3.01e-12;2!UBERON:0003838;3.01e-12;2!UBERON:0003586;3.01e-12;2!UBERON:0005169;3.01e-12;2!UBERON:0002321;3.01e-12;2!UBERON:0005215;3.01e-12;2!UBERON:0002303;3.01e-12;2!UBERON:0002319;3.01e-12;2!UBERON:0000059;1.31e-11;11!UBERON:0000473;6.42e-11;8!UBERON:0002417;1.05e-10;58!UBERON:0000916;1.05e-10;58!UBERON:0004921;2.51e-10;33!UBERON:0004907;5.56e-10;5!UBERON:0001155;2.74e-09;9!UBERON:0003101;4.29e-08;22!UBERON:0000079;4.29e-08;22!UBERON:0003135;5.79e-08;11!UBERON:0000074;1.53e-07;7!UBERON:0001229;1.53e-07;7 | |||
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| ||
|short_description=p16@TJP2 | |||
}} | }} |
Latest revision as of 16:39, 17 September 2015
Short description: | p16@TJP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TJP2_5end |
Coexpression cluster: | C4826_hepatocellular_Renal_kidney_adenocarcinoma_Intestinal_small_Prostate |
Association with transcript: | -256bp_to_NM_001170414_5end |
EntrezGene: | TJP2 |
HGNC: | 11828 |
UniProt: | B7Z2R3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.69e-52 | 10 |
nephron tubule epithelial cell | 2.69e-52 | 10 |
epithelial cell of nephron | 3.59e-41 | 15 |
kidney cell | 4.44e-36 | 17 |
kidney epithelial cell | 4.44e-36 | 17 |
kidney cortical cell | 2.09e-27 | 12 |
renal cortical epithelial cell | 2.09e-27 | 12 |
brush border epithelial cell | 3.38e-17 | 3 |
kidney cortex tubule cell | 3.38e-17 | 3 |
epithelial cell of proximal tubule | 3.38e-17 | 3 |
germ line cell | 2.30e-12 | 7 |
germ cell | 2.30e-12 | 7 |
mesangial cell | 3.01e-12 | 2 |
kidney interstitial cell | 3.01e-12 | 2 |
juxtaglomerular complex cell | 3.01e-12 | 2 |
renal interstitial pericyte | 3.01e-12 | 2 |
extraglomerular mesangial cell | 3.01e-12 | 2 |
epithelial cell | 1.12e-11 | 253 |
glomerular cell | 1.78e-07 | 7 |
kidney corpuscule cell | 1.78e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.75e-11 | 2 |
adenocarcinoma | 1.94e-09 | 25 |
carcinoma | 4.22e-08 | 106 |