FFCP PHASE1:Hg19::chr1:204347485..204347519,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:204347485..204347519,-
|short_description=p@chr1:204347485..204347519,-
|description=CAGE_peak_at_chr1:204347485..204347519,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:204347485..204347519,- | |||
|description=CAGE_peak_at_chr1:204347485..204347519,- | |||
|id=chr1:204347485..204347519,- | |||
|ontology_enrichment_celltype=CL:0000066!3.92e-30!254;CL:0002139!6.12e-12!24;CL:1000507!1.15e-10!12;CL:1000494!1.15e-10!12;CL:1000497!1.75e-10!18;CL:0002518!1.75e-10!18;CL:0000071!4.20e-09!18;CL:0002546!4.20e-09!18;CL:1000449!1.87e-08!16;CL:0002078!1.91e-07!44;CL:0000115!2.66e-07!35;CL:0000213!4.34e-07!57;CL:0000215!4.34e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.50e-24;10!CL:1000494;2.50e-24;10!CL:1000497;2.48e-19;17!CL:0002518;2.48e-19;17!CL:1000449;2.17e-15;15!CL:0002681;1.24e-09;12!CL:0002584;1.24e-09;12!CL:0002149;4.72e-09;6!CL:0002255;4.72e-09;6!CL:0000182;5.58e-09;12!CL:0000239;1.49e-08;3!CL:1000615;1.49e-08;3!CL:0002306;1.49e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.56e-24,10;CL:1000494,2.56e-24,10;CL:0000066,1.33e-23,253;CL:1000497,2.31e-19,17;CL:0002518,2.31e-19,17;CL:1000449,2.20e-15,15;CL:0002681,1.27e-09,12;CL:0002584,1.27e-09,12;CL:0002149,3.95e-09,6;CL:0002255,3.95e-09,6;CL:0000182,5.54e-09,12;CL:0000239,1.43e-08,3;CL:1000615,1.43e-08,3;CL:0002306,1.43e-08,3;CL:0000223,2.66e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;8.91e-14;13!UBERON:0004161;3.80e-10;11!UBERON:0003104;9.98e-09;31 | |||
|ontology_enrichment_disease=DOID:305!3.53e-28!106;DOID:0050687!6.77e-18!143;DOID:299!1.02e-16!25;DOID:162!1.93e-08!235;DOID:14566!3.22e-08!239;DOID:7!6.52e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:299;2.68e-17;25!DOID:3001;4.72e-09;6!DOID:305;6.80e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.07e-25,106;DOID:299,2.48e-17,25;DOID:0050687,6.10e-17,143;DOID:3001,3.95e-09,6;DOID:162,2.70e-07,235;DOID:14566,6.09e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0005172!4.23e-15!55;UBERON:0005173!4.23e-15!55;UBERON:0002417!1.50e-12!61;UBERON:0000916!1.50e-12!61;UBERON:0000489!1.89e-12!32;UBERON:0000058!3.74e-12!26;UBERON:0004921!8.65e-12!129;UBERON:0004185!8.65e-12!129;UBERON:0002113!9.81e-12!27;UBERON:0003918!9.81e-12!27;UBERON:0005095!9.81e-12!27;UBERON:0007687!9.81e-12!27;UBERON:0009773!1.15e-10!12;UBERON:0001231!1.15e-10!12;UBERON:0004810!1.15e-10!12;UBERON:0005177!4.24e-10!107;UBERON:0000080!4.88e-10!18;UBERON:0002120!4.88e-10!18;UBERON:0004875!4.88e-10!18;UBERON:0005721!4.88e-10!18;UBERON:0005754!4.88e-10!18;UBERON:0007297!4.88e-10!18;UBERON:0001007!5.08e-10!155;UBERON:0001555!5.08e-10!155;UBERON:0007026!5.08e-10!155;UBERON:0001737!1.09e-09!9;UBERON:0009497!2.46e-09!25;UBERON:0000015!2.46e-09!25;UBERON:0002423!2.46e-09!25;UBERON:0006235!2.46e-09!25;UBERON:0004161!2.46e-09!25;UBERON:0003887!2.68e-09!21;UBERON:0006555!2.80e-09!17;UBERON:0005103!2.80e-09!17;UBERON:0000083!2.80e-09!17;UBERON:0009201!2.80e-09!17;UBERON:0004819!2.80e-09!17;UBERON:0006553!2.80e-09!17;UBERON:0003074!2.80e-09!17;UBERON:0003060!2.80e-09!17;UBERON:0006554!3.39e-09!44;UBERON:0000077!3.58e-09!130;UBERON:0001986!4.20e-09!18;UBERON:0004638!4.20e-09!18;UBERON:0004852!4.20e-09!18;UBERON:0009569!7.15e-09!113;UBERON:0001008!7.81e-09!45;UBERON:0004119!8.98e-09!169;UBERON:0000925!8.98e-09!169;UBERON:0006595!8.98e-09!169;UBERON:0004876!1.28e-08!20;UBERON:0004211!1.87e-08!16;UBERON:0001285!1.87e-08!16;UBERON:0007684!1.87e-08!16;UBERON:0003220!1.87e-08!16;UBERON:0004208!1.87e-08!16;UBERON:0000466!5.53e-08!126;UBERON:0009854!8.25e-08!23;UBERON:0000487!8.37e-08!22;UBERON:0000477!9.85e-08!286;UBERON:0009856!2.26e-07!26;UBERON:0004111!2.37e-07!241;UBERON:0003914!2.63e-07!118;UBERON:0001041!3.45e-07!98;UBERON:0008835!3.75e-07!22;UBERON:0003894!3.75e-07!22;UBERON:0007499!9.43e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.50e-24;10!UBERON:0009773;2.50e-24;10!UBERON:0001231;2.50e-24;10!UBERON:0004810;2.50e-24;10!UBERON:0002113;6.80e-18;24!UBERON:0011143;6.80e-18;24!UBERON:0000489;3.65e-16;29!UBERON:0006554;1.74e-15;30!UBERON:0001008;1.74e-15;30!UBERON:0006555;2.17e-15;15!UBERON:0004819;2.17e-15;15!UBERON:0001285;2.17e-15;15!UBERON:0007684;2.17e-15;15!UBERON:0001737;8.96e-14;9!UBERON:0001557;8.96e-14;9!UBERON:0005172;1.66e-12;52!UBERON:0005173;1.66e-12;52!UBERON:0005409;2.61e-12;22!UBERON:0000160;1.59e-11;17!UBERON:0002423;3.12e-11;25!UBERON:0001225;1.24e-09;12!UBERON:0008987;1.24e-09;12!UBERON:0002417;4.37e-09;58!UBERON:0000916;4.37e-09;58!UBERON:0002108;1.17e-08;4!UBERON:0006853;1.49e-08;3!UBERON:0007685;1.49e-08;3!UBERON:0004134;1.49e-08;3!UBERON:0001851;1.86e-07;15!UBERON:0000353;1.86e-07;15!UBERON:0002107;8.41e-07;19!UBERON:0006925;8.41e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.56e-24,10;UBERON:0005172,4.47e-20,54;UBERON:0005173,4.47e-20,54;UBERON:0002113,1.61e-18,26;UBERON:0003918,1.61e-18,26;UBERON:0011143,1.61e-18,26;UBERON:0005095,1.61e-18,26;UBERON:0007687,1.61e-18,26;UBERON:0002417,2.26e-17,60;UBERON:0000916,2.26e-17,60;UBERON:0006555,5.37e-17,16;UBERON:0004819,5.37e-17,16;UBERON:0000489,6.16e-17,31;UBERON:0004211,2.20e-15,15;UBERON:0009773,2.20e-15,15;UBERON:0001231,2.20e-15,15;UBERON:0001285,2.20e-15,15;UBERON:0007684,2.20e-15,15;UBERON:0004208,2.20e-15,15;UBERON:0004921,3.28e-14,118;UBERON:0001737,1.01e-13,9;UBERON:0006554,1.34e-12,47;UBERON:0001008,3.11e-12,48;UBERON:0000160,9.74e-12,17;UBERON:0005177,2.45e-11,101;UBERON:0009497,2.99e-11,25;UBERON:0000015,2.99e-11,25;UBERON:0002423,2.99e-11,25;UBERON:0006235,2.99e-11,25;UBERON:0004161,2.99e-11,25;UBERON:0008835,5.94e-11,22;UBERON:0003894,5.94e-11,22;UBERON:0001007,8.51e-11,145;UBERON:0001555,8.51e-11,145;UBERON:0007026,8.51e-11,145;UBERON:0005409,9.68e-11,25;UBERON:0009854,2.29e-10,23;UBERON:0001225,1.27e-09,12;UBERON:0008987,1.27e-09,12;UBERON:0007499,2.46e-09,25;UBERON:0003914,3.20e-09,117;UBERON:0004119,5.68e-09,160;UBERON:0000925,5.68e-09,160;UBERON:0006595,5.68e-09,160;UBERON:0009856,6.99e-09,26;UBERON:0002108,1.11e-08,4;UBERON:0009569,1.25e-08,112;UBERON:0006853,1.43e-08,3;UBERON:0007685,1.43e-08,3;UBERON:0004134,1.43e-08,3;UBERON:0001041,9.81e-08,87;UBERON:0001851,1.90e-07,15;UBERON:0000353,1.90e-07,15;UBERON:0003104,4.39e-07,160;UBERON:0009142,4.39e-07,160;UBERON:0002107,8.29e-07,19;UBERON:0006925,8.29e-07,19;UBERON:0008836,8.29e-07,19 | |||
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| ||
|short_description=p@chr1:204347485..204347519,- | |||
}} | }} |
Latest revision as of 02:37, 28 July 2015
Short description: | p@chr1:204347485..204347519, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:204347485..204347519, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.56e-24 | 10 |
nephron tubule epithelial cell | 2.56e-24 | 10 |
epithelial cell | 1.33e-23 | 253 |
kidney cell | 2.31e-19 | 17 |
kidney epithelial cell | 2.31e-19 | 17 |
epithelial cell of nephron | 2.20e-15 | 15 |
kidney cortical cell | 1.27e-09 | 12 |
renal cortical epithelial cell | 1.27e-09 | 12 |
epithelial cell of uterus | 3.95e-09 | 6 |
stromal cell of endometrium | 3.95e-09 | 6 |
hepatocyte | 5.54e-09 | 12 |
brush border epithelial cell | 1.43e-08 | 3 |
kidney cortex tubule cell | 1.43e-08 | 3 |
epithelial cell of proximal tubule | 1.43e-08 | 3 |
endodermal cell | 2.66e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.07e-25 | 106 |
adenocarcinoma | 2.48e-17 | 25 |
cell type cancer | 6.10e-17 | 143 |
female reproductive endometrioid cancer | 3.95e-09 | 6 |
cancer | 2.70e-07 | 235 |
disease of cellular proliferation | 6.09e-07 | 239 |