FFCP PHASE1:Hg19::chr6:7108769..7108785,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6239 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10449 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-79bp_to_ENST00000475946,uc003mxd.2_5end | |||
|coexpression_cluster_id=C304 | |||
|description=CAGE_peak_11_at_RREB1_5end | |||
|id=chr6:7108769..7108785,+ | |||
|ontology_enrichment_celltype=CL:1000507!8.89e-08!12;CL:1000494!8.89e-08!12;CL:0000181!8.08e-07!12;CL:0000417!8.08e-07!12;CL:0000668!8.08e-07!12;CL:0000414!8.08e-07!12;CL:0000412!8.08e-07!12;CL:0000182!8.08e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.16e-28;12!CL:0000239;8.16e-21;3!CL:1000615;8.16e-21;3!CL:0002306;8.16e-21;3!CL:1000507;1.03e-16;10!CL:1000494;1.03e-16;10!CL:1000449;4.28e-11;15!CL:1000497;9.06e-10;17!CL:0002518;9.06e-10;17!CL:0002681;3.42e-09;12!CL:0002584;3.42e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.34e-28,12;CL:0000239,3.83e-21,3;CL:1000615,3.83e-21,3;CL:0002306,3.83e-21,3;CL:1000507,7.90e-17,10;CL:1000494,7.90e-17,10;CL:1000449,3.59e-11,15;CL:1000497,7.78e-10,17;CL:0002518,7.78e-10,17;CL:0002681,3.13e-09,12;CL:0002584,3.13e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.00e-23;11!UBERON:0003104;1.86e-21;31!UBERON:0009497;3.38e-19;13!UBERON:0000358;1.81e-08;1!UBERON:0001041;5.11e-08;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.44e-12!55;UBERON:0005173!3.44e-12!55;UBERON:0002417!4.44e-10!61;UBERON:0000916!4.44e-10!61;UBERON:0005177!1.14e-09!107;UBERON:0009773!8.89e-08!12;UBERON:0001231!8.89e-08!12;UBERON:0004810!8.89e-08!12;UBERON:0002113!1.54e-07!27;UBERON:0003918!1.54e-07!27;UBERON:0005095!1.54e-07!27;UBERON:0007687!1.54e-07!27;UBERON:0009854!1.72e-07!23;UBERON:0000489!1.81e-07!32;UBERON:0006555!2.00e-07!17;UBERON:0005103!2.00e-07!17;UBERON:0000083!2.00e-07!17;UBERON:0009201!2.00e-07!17;UBERON:0004819!2.00e-07!17;UBERON:0006553!2.00e-07!17;UBERON:0003074!2.00e-07!17;UBERON:0003060!2.00e-07!17;UBERON:0009856!3.12e-07!26;UBERON:0002107!3.85e-07!19;UBERON:0006925!3.85e-07!19;UBERON:0008836!3.85e-07!19;UBERON:0000080!7.68e-07!18;UBERON:0002120!7.68e-07!18;UBERON:0004875!7.68e-07!18;UBERON:0005721!7.68e-07!18;UBERON:0005754!7.68e-07!18;UBERON:0007297!7.68e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.20e-29;19!UBERON:0006925;6.20e-29;19!UBERON:0002423;1.18e-21;25!UBERON:0006853;8.16e-21;3!UBERON:0007685;8.16e-21;3!UBERON:0004134;8.16e-21;3!UBERON:0005172;1.19e-20;52!UBERON:0005173;1.19e-20;52!UBERON:0004211;1.03e-16;10!UBERON:0009773;1.03e-16;10!UBERON:0001231;1.03e-16;10!UBERON:0004810;1.03e-16;10!UBERON:0002365;1.05e-16;31!UBERON:0002330;1.05e-16;31!UBERON:0002417;7.76e-15;58!UBERON:0000916;7.76e-15;58!UBERON:0002368;1.27e-14;33!UBERON:0002113;3.21e-13;24!UBERON:0011143;3.21e-13;24!UBERON:0000949;2.90e-12;43!UBERON:0006555;4.28e-11;15!UBERON:0004819;4.28e-11;15!UBERON:0001285;4.28e-11;15!UBERON:0007684;4.28e-11;15!UBERON:0000489;8.41e-11;29!UBERON:0006554;2.05e-10;30!UBERON:0001008;2.05e-10;30!UBERON:0001225;3.42e-09;12!UBERON:0008987;3.42e-09;12!UBERON:0001389;4.40e-08;1!UBERON:0000026;4.40e-08;1!UBERON:0008784;4.40e-08;1!UBERON:0006058;4.40e-08;1!UBERON:0003663;4.40e-08;1!UBERON:0004256;4.40e-08;1!UBERON:0004708;4.40e-08;1!UBERON:0002101;4.40e-08;1!UBERON:0004709;4.40e-08;1!UBERON:0002529;4.40e-08;1!UBERON:0010538;4.40e-08;1!UBERON:0003661;4.40e-08;1!UBERON:0010890;4.40e-08;1!UBERON:0002471;4.40e-08;1!UBERON:0001383;4.40e-08;1!UBERON:0010758;4.40e-08;1!UBERON:0010707;4.40e-08;1!UBERON:0000978;4.40e-08;1!UBERON:0002103;4.40e-08;1!UBERON:0001665;4.40e-08;1!UBERON:0003823;4.40e-08;1!UBERON:0000154;4.40e-08;1!UBERON:0010709;4.40e-08;1!UBERON:0001851;2.22e-07;15!UBERON:0000353;2.22e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.78e-30,54;UBERON:0005173,3.78e-30,54;UBERON:0002107,5.28e-29,19;UBERON:0006925,5.28e-29,19;UBERON:0008836,5.28e-29,19;UBERON:0002417,8.03e-27,60;UBERON:0000916,8.03e-27,60;UBERON:0008835,7.37e-25,22;UBERON:0003894,7.37e-25,22;UBERON:0009854,1.02e-23,23;UBERON:0007499,1.05e-21,25;UBERON:0009497,1.05e-21,25;UBERON:0000015,1.05e-21,25;UBERON:0002423,1.05e-21,25;UBERON:0006235,1.05e-21,25;UBERON:0004161,1.05e-21,25;UBERON:0006853,3.83e-21,3;UBERON:0007685,3.83e-21,3;UBERON:0004134,3.83e-21,3;UBERON:0009856,8.10e-21,26;UBERON:0002365,3.13e-17,31;UBERON:0002330,3.13e-17,31;UBERON:0004810,7.90e-17,10;UBERON:0005177,1.02e-16,101;UBERON:0002368,4.26e-15,35;UBERON:0000949,4.46e-14,45;UBERON:0009569,6.56e-13,112;UBERON:0002113,3.12e-12,26;UBERON:0003918,3.12e-12,26;UBERON:0011143,3.12e-12,26;UBERON:0005095,3.12e-12,26;UBERON:0007687,3.12e-12,26;UBERON:0003929,2.13e-11,54;UBERON:0004211,3.59e-11,15;UBERON:0009773,3.59e-11,15;UBERON:0001231,3.59e-11,15;UBERON:0001285,3.59e-11,15;UBERON:0007684,3.59e-11,15;UBERON:0004208,3.59e-11,15;UBERON:0003104,1.23e-10,160;UBERON:0009142,1.23e-10,160;UBERON:0003914,1.71e-10,117;UBERON:0006555,1.84e-10,16;UBERON:0004819,1.84e-10,16;UBERON:0000489,3.97e-10,31;UBERON:0001225,3.13e-09,12;UBERON:0008987,3.13e-09,12;UBERON:0002100,5.76e-09,199;UBERON:0002530,2.26e-08,59;UBERON:0005418,5.82e-08,1;UBERON:0001389,5.82e-08,1;UBERON:0000026,5.82e-08,1;UBERON:0008784,5.82e-08,1;UBERON:0006058,5.82e-08,1;UBERON:0003663,5.82e-08,1;UBERON:0004256,5.82e-08,1;UBERON:0004708,5.82e-08,1;UBERON:0002101,5.82e-08,1;UBERON:0004709,5.82e-08,1;UBERON:0002529,5.82e-08,1;UBERON:0010538,5.82e-08,1;UBERON:0003661,5.82e-08,1;UBERON:0010890,5.82e-08,1;UBERON:0002471,5.82e-08,1;UBERON:0001383,5.82e-08,1;UBERON:0004357,5.82e-08,1;UBERON:0004347,5.82e-08,1;UBERON:0005420,5.82e-08,1;UBERON:0005732,5.82e-08,1;UBERON:0010758,5.82e-08,1;UBERON:0010707,5.82e-08,1;UBERON:0000978,5.82e-08,1;UBERON:0002103,5.82e-08,1;UBERON:0001665,5.82e-08,1;UBERON:0003823,5.82e-08,1;UBERON:0000154,5.82e-08,1;UBERON:0010709,5.82e-08,1;UBERON:0005733,5.82e-08,1;UBERON:0005730,5.82e-08,1;UBERON:0001851,2.08e-07,15;UBERON:0000353,2.08e-07,15;UBERON:0005911,6.22e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0.328402357799783,0.236132343941038,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,2.53510069643662,2.94848165003288,5.90789906681404,0,1.10689594688802,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.0920809889358963,0.114814448164607,0,0,0.451199612907412,0.462092022626489,1.56869953835371,0,0.211103257785751,0,0,0,0,0.270946437543853,1.00337954770971,1.52925763827023,1.66215201785745,1.79099803777743,0,0,0,0,0,2.06082023295445,0.0915694648183434,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0,0.356128142586949,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0.284136146806413,0.71623345421307,0.296964680832639,0,0,0,0,0,0,0,0.552567831062295,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0.108647371922008,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0.210998064528027,1.30586246527318,0.141353071433941,0,0,0.442287822516696,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0,2.41981432097328,0,0.063186579628488,0.300646838828985,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.432271251462318,0,0.514784993585894,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0.268733889946905,0.360299883542404,2.32991899054908,2.6786281984456,1.483485450861,2.56133466645903,0.295282444544246,0,0,0,0,0,0.415440338029185,0.2249738915515,0,0,0,4.1767024868575,2.7800931711549,0,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0,4.10346254298631,3.97520666736664,0,0,0.342173675768659,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,1.53744911152768,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,1.56302802246618,0.261906694481422,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0.280272163313789,0.913158720509496,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894843454382338,0.098150233615243,1.21917924982269,1.29485767437579,0.718639647993729,2.3196288626764,0.485710993059139,0,0,0,0.11294608203896,0,0.301925687133347,1.46630900405095,0.655678681511872,0,0.735444965261716,0.235676547101626,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0.303114792872958,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0.342233301085281,0.202056159043763,0.0717222053926763,0,0,0,0,0.0898252021065869,2.34640942403454,0.488965776731466,0,0,0,0 | |||
|short_description=p11@RREB1 | |||
}} |
Revision as of 09:50, 22 January 2014
Short description: | p11@RREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RREB1_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | -79bp_to_ENST00000475946, uc003mxd.2_5end |
EntrezGene: | RREB1 |
HGNC: | 10449 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.34e-28 | 12 |
brush border epithelial cell | 3.83e-21 | 3 |
kidney cortex tubule cell | 3.83e-21 | 3 |
epithelial cell of proximal tubule | 3.83e-21 | 3 |
kidney tubule cell | 7.90e-17 | 10 |
nephron tubule epithelial cell | 7.90e-17 | 10 |
epithelial cell of nephron | 3.59e-11 | 15 |
kidney cell | 7.78e-10 | 17 |
kidney epithelial cell | 7.78e-10 | 17 |
kidney cortical cell | 3.13e-09 | 12 |
renal cortical epithelial cell | 3.13e-09 | 12 |