UBERON:0002103
From FANTOM5_SSTAR
Name: | hindlimb | |
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Namespace: | FANTOM | |
Definition: | "A (free) limb that is connected to a pelvic girdle region. The extent of this structure includes autopod, stylopod and zeugopod regions when present, but excludes the pelvic girdle and its parts." [UBERONREF:0000003, Wikipedia:Lower_limb] | |
Xrefs: |
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Synonyms: |
"free lower limb" EXACT [FMA:24879, UBERONREF:0000003] "hind limb" EXACT [] "hindlimb" EXACT [] "inferior member" EXACT [] "lower extremity" RELATED [] "lower limb" EXACT [] "membrum inferius" EXACT [FMA:7184, FMA:TA] "membrum inferius" RELATED LATIN [Wikipedia:Lower_limb] "pelvic appendage" RELATED [] | |
Comments: | AO notes: note that this corresponds to FMA:'free lower limb' (a limb segment), NOT 'lower limb'. Both MA and FMA consider shoulder (and shoulder bones) part of upper limb. Note that AAO class probably refers to skeleton | |
Alt_id: | UBERON:FMA_7184-MA_0000026-MIAA_0000395-XAO_0003031 | |
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002101(limb),UBERON:0004709(pelvic appendage) |
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develops_from: | UBERON:0005418(hindlimb bud) |
part_of: | UBERON:0010709(pelvic complex),UBERON:0000154(posterior region of body),UBERON:0010709(pelvic complex) |
Children
part of: | UBERON:0000376 (hindlimb stylopod),UBERON:0000978 (leg),UBERON:0001377 (quadriceps femoris),UBERON:0001441 (hindlimb skeleton),UBERON:0002387 (foot),UBERON:0003464 (hindlimb bone),UBERON:0003532 (hindlimb skin),UBERON:0003589 (hindlimb connective tissue),UBERON:0003608 (hindlimb long bone),UBERON:0003663 (hindlimb muscle),UBERON:0003823 (hindlimb zeugopod),UBERON:0003840 (hindlimb joint),UBERON:0003860 (hindlimb mesenchyme),UBERON:0004482 (musculature of lower limb),UBERON:0008784 (lower limb segment),UBERON:0010885 (hindlimb cartilage element),UBERON:0010886 (hindlimb bone pre-cartilage condensation),UBERON:0015022 (hindlimb endochondral element) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10264-104D3
- 10267-104D6
- 10281-104F2
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10285-104F6
- 10292-104G4 (achilles tendon, donor2)
- 10295-104G7 (cruciate ligament, donor2)
- 10309-104I3
- 10310-104I4
- 10313-104I7
... further results Mouse (Mus musculus)
- 10264-104D3
- 10267-104D6
- 10281-104F2
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10285-104F6
- 10292-104G4 (achilles tendon, donor2)
- 10295-104G7 (cruciate ligament, donor2)
- 10309-104I3
- 10310-104I4
- 10313-104I7
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002103 (hindlimb), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Lower limb, which connects the pes with the pelvic girdle.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.