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UBERON:0002101

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Name:limb
Namespace:FANTOM
Definition:"A paired appendage that is evolved from a paired fin. The extent of this structure includes autopod, stylopod and zeugopod regions when present, but excludes the girdle and its parts." [UBERONREF:0000003, Wikipedia:Limb]
Xrefs:
links:

AAO:0010336
EFO:0000876
EHDAA2:0003172
EHDAA:1697
EHDAA:8273
EMAPA:16405
FMA:24875
GAID:36
galen:Extremity
MA:0000007
MAT:0000090
MIAA:0000090
ncithesaurus:Limb
OpenCyc:Mx4rvn1uSZwpEbGdrcN5Y29ycA
SCTID:243996003
VHOG:0000336
VSAO:0000121

XAO:0003027
Synonyms: "flipper" NARROW SENSU []
"free limb" EXACT [FMA:24875]
"limb sensu vertebrata" EXACT [MAT:0000090]
"tetrapod limb" EXACT []
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004708(paired limb/fin)
develops_from:UBERON:0004347(limb bud)



Children

is a:UBERON:0002102 (forelimb),UBERON:0002103 (hindlimb),UBERON:0003285 (limb of embryo)
part of:UBERON:0001419 (skin of limb),UBERON:0002428 (limb bone),UBERON:0002472 (stylopod),UBERON:0002529 (limb segment),UBERON:0003587 (limb connective tissue),UBERON:0003606 (limb long bone),UBERON:0003657 (limb joint),UBERON:0003661 (limb muscle),UBERON:0004381 (skeleton of limb),UBERON:0004480 (musculature of limb),UBERON:0009749 (limb mesenchyme),UBERON:0010712 (limb skeleton subdivision),UBERON:0011139 (synovial limb joint),UBERON:0015061 (limb endochondral element)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002101 (limb), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "Organism subdivision that has as its parts the jointed appendages used for locomotion and manipulation.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.