FFCP PHASE1:Hg19::chr19:682037..682060,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr19:682037..682060,+ | |||
|id=chr19:682037..682060,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.73e-16;3!CL:0002615;4.99e-16;3!CL:1000746;9.78e-15;7!CL:1000612;9.78e-15;7!CL:0002581;1.40e-12;1!CL:0002616;3.08e-12;1!CL:0002537;7.11e-10;5!CL:0002188;8.49e-10;5!CL:0000349;9.06e-10;19!CL:0002681;7.87e-09;12!CL:0002584;7.87e-09;12!CL:0000136;2.68e-08;13!CL:1000449;3.66e-07;15!CL:0000650;9.53e-07;2!CL:1000500;9.53e-07;2!CL:1000618;9.53e-07;2!CL:1001318;9.53e-07;2!CL:0002173;9.53e-07;2!CL:0002600;9.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.73e-16,3;CL:0002615,5.38e-16,3;CL:1000746,9.79e-15,7;CL:1000612,9.79e-15,7;CL:0002581,1.11e-12,1;CL:0002616,1.96e-12,1;CL:0002537,6.22e-10,5;CL:0000349,8.46e-10,19;CL:0002188,9.28e-10,5;CL:0002681,7.87e-09,12;CL:0002584,7.87e-09,12;CL:0000136,2.77e-07,15;CL:1000449,3.66e-07,15;CL:0000650,8.52e-07,2;CL:1000500,8.52e-07,2;CL:1000618,8.52e-07,2;CL:1001318,8.52e-07,2;CL:0002173,8.52e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.69e-09!14;UBERON:0000158!1.69e-09!14;UBERON:0000478!8.09e-09!24;UBERON:0004923!5.88e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;4.89e-23;2!UBERON:0005631;2.40e-18;10!UBERON:0000158;2.40e-18;10!UBERON:0003688;2.51e-17;6!UBERON:0002358;2.51e-17;6!UBERON:0003684;2.51e-17;6!UBERON:0001178;2.51e-17;6!UBERON:0003124;2.73e-16;3!UBERON:0000920;2.73e-16;3!UBERON:0000074;9.78e-15;7!UBERON:0001229;9.78e-15;7!UBERON:0004457;9.43e-12;9!UBERON:0000042;9.43e-12;9!UBERON:0000478;1.27e-11;24!UBERON:0001225;7.87e-09;12!UBERON:0008987;7.87e-09;12!UBERON:0000305;2.69e-07;7!UBERON:0001851;3.66e-07;15!UBERON:0006555;3.66e-07;15!UBERON:0000353;3.66e-07;15!UBERON:0004819;3.66e-07;15!UBERON:0001285;3.66e-07;15!UBERON:0007684;3.66e-07;15!UBERON:0003567;9.53e-07;2!UBERON:0003838;9.53e-07;2!UBERON:0003586;9.53e-07;2!UBERON:0005169;9.53e-07;2!UBERON:0002321;9.53e-07;2!UBERON:0005215;9.53e-07;2!UBERON:0002303;9.53e-07;2!UBERON:0002319;9.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.49e-23,2;UBERON:0003688,3.31e-17,6;UBERON:0002358,3.31e-17,6;UBERON:0003684,3.31e-17,6;UBERON:0001178,3.31e-17,6;UBERON:0000920,2.73e-16,3;UBERON:0010532,9.79e-15,7;UBERON:0000074,9.79e-15,7;UBERON:0001229,9.79e-15,7;UBERON:0001230,9.79e-15,7;UBERON:0003220,9.79e-15,7;UBERON:0005749,9.79e-15,7;UBERON:0004199,9.79e-15,7;UBERON:0004209,9.79e-15,7;UBERON:0004198,9.79e-15,7;UBERON:0005631,3.19e-13,14;UBERON:0000158,3.19e-13,14;UBERON:0005103,5.71e-13,8;UBERON:0000083,5.71e-13,8;UBERON:0009201,5.71e-13,8;UBERON:0006553,5.71e-13,8;UBERON:0003074,5.71e-13,8;UBERON:0003060,5.71e-13,8;UBERON:0000478,1.24e-11,24;UBERON:0000080,1.36e-11,9;UBERON:0002120,1.36e-11,9;UBERON:0004875,1.36e-11,9;UBERON:0005721,1.36e-11,9;UBERON:0005754,1.36e-11,9;UBERON:0007297,1.36e-11,9;UBERON:0004876,1.38e-09,11;UBERON:0004457,6.88e-09,12;UBERON:0000042,6.88e-09,12;UBERON:0001225,7.87e-09,12;UBERON:0008987,7.87e-09,12;UBERON:0003887,7.87e-09,12;UBERON:0004923,1.11e-07,66;UBERON:0003124,1.72e-07,7;UBERON:0000305,2.45e-07,7;UBERON:0001851,3.66e-07,15;UBERON:0004211,3.66e-07,15;UBERON:0009773,3.66e-07,15;UBERON:0000353,3.66e-07,15;UBERON:0001231,3.66e-07,15;UBERON:0001285,3.66e-07,15;UBERON:0007684,3.66e-07,15;UBERON:0004208,3.66e-07,15;UBERON:0003886,5.60e-07,54;UBERON:0003567,8.52e-07,2;UBERON:0003838,8.52e-07,2;UBERON:0003586,8.52e-07,2;UBERON:0005169,8.52e-07,2;UBERON:0002321,8.52e-07,2;UBERON:0005215,8.52e-07,2;UBERON:0002303,8.52e-07,2;UBERON:0002319,8.52e-07,2;UBERON:0006555,9.58e-07,16;UBERON:0004819,9.58e-07,16 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,3.00219895059391,2.23480547213644,1.74467704820074,0,0,0,0.245733936501509,2.79120467188971,0.655324116390517,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0,0,0,0,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.591534000199219,0,0,0.220587945464788,0.435758888184812,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.358234090811393,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,0,0,1.41849132023278,0,0.142977993658148,0.542621605391443,0,0.65147236858747,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0.178428988797162,0.473107245101804,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0.907170879989041,0,0.306923946576125,0,1.02511319404561,0,0.804269605718038,2.96836132889982,0,0,0,0,0,0,0.40101294060657,0.460404944679482,0,0,0,0,0.231046011313244,0,0,0.73886140225013,1.13733384070897,0,0,0,0,1.50506932156456,0,0,0.223874754722178,0,0,0.256450125116389,0.656029291399411,0.976135183992909,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0,0.495854746082934,0,0.255225424989168,0.4046311234222,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,1.31178950409327,0.202910376962704,0.30982349809975,0,0.143411352204052,0.294747123039363,0,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,4.7748896947538,0.296964680832639,1.53580351049616,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0.23056390438806,0.448788222048861,0.217294743844016,20.0970730631109,0.641183153813036,46.3740255136212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.370691816839509,1.14864144456001,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0.277349346026277,0,0,0.0870592065804026,0,0.171986032471617,0,0,0,0.0969890164884194,0.0882561266915003,0.451961481561065,0.137041924646751,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0.265841714557995,0.521745061811734,0.300515217994437,0.380805212168795,0.406870733204662,0,0.107410557042488,0.464033759878494,0,2.00013882331577,0,0,0,0,0.428883182749851,0,0.453411851024545,0,0,0,0.617602894321944,0.219284049578707,0,0,0.168942440653073,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0.261906694481422,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0.126166424835079,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr19:682037..682060,+ | |||
}} |
Revision as of 20:07, 20 January 2014
Short description: | p@chr19:682037..682060, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr19:682037..682060, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.73e-16 | 3 |
adipocyte of omentum tissue | 5.38e-16 | 3 |
glomerular cell | 9.79e-15 | 7 |
kidney corpuscule cell | 9.79e-15 | 7 |
perirenal preadipocyte | 1.11e-12 | 1 |
perirenal adipocyte cell | 1.96e-12 | 1 |
amnion mesenchymal stem cell | 6.22e-10 | 5 |
extraembryonic cell | 8.46e-10 | 19 |
glomerular endothelial cell | 9.28e-10 | 5 |
kidney cortical cell | 7.87e-09 | 12 |
renal cortical epithelial cell | 7.87e-09 | 12 |
fat cell | 2.77e-07 | 15 |
epithelial cell of nephron | 3.66e-07 | 15 |
mesangial cell | 8.52e-07 | 2 |
kidney interstitial cell | 8.52e-07 | 2 |
juxtaglomerular complex cell | 8.52e-07 | 2 |
renal interstitial pericyte | 8.52e-07 | 2 |
extraglomerular mesangial cell | 8.52e-07 | 2 |