CL:0000349
From FANTOM5_SSTAR
Name: | extraembryonic cell |
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Namespace: | FANTOM |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000548(animal cell),CL:0002371(somatic cell) |
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part_of: | UBERON:0000478(extraembryonic structure) |
Children
is a: | CL:0000351 (trophoblast cell),CL:0002536 (amniotic epithelial cell),CL:0002537 (amnion mesenchymal stem cell),CL:0002541 (chorionic membrane mesenchymal stem cell),CL:0002558 (fibroblast of villous mesenchyme),CL:0002569 (mesenchymal stem cell of umbilical cord),CL:0002577 (placental epithelial cell) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11214-116A8 (Mesenchymal stem cells - umbilical, donor0)
- 11278-116H9 (Placental Epithelial Cells, donor1)
- 11355-117H5 (Placental Epithelial Cells, donor2)
- 11427-118G5 (Placental Epithelial Cells, donor3)
- 11533-120A3 (Amniotic Epithelial Cells, donor1)
- 11534-120A4
- 11539-120A9 (Mesenchymal Stem Cells - umbilical, donor1)
- 11547-120B8 (Mesenchymal Stem Cells - amniotic membrane, donor1)
- 11548-120B9 (Mesenchymal Stem Cells - Wharton's Jelly, donor1)
- 11549-120C1 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor1)
... further results Mouse (Mus musculus)
- 11214-116A8 (Mesenchymal stem cells - umbilical, donor0)
- 11278-116H9 (Placental Epithelial Cells, donor1)
- 11355-117H5 (Placental Epithelial Cells, donor2)
- 11427-118G5 (Placental Epithelial Cells, donor3)
- 11533-120A3 (Amniotic Epithelial Cells, donor1)
- 11534-120A4
- 11539-120A9 (Mesenchymal Stem Cells - umbilical, donor1)
- 11547-120B8 (Mesenchymal Stem Cells - amniotic membrane, donor1)
- 11548-120B9 (Mesenchymal Stem Cells - Wharton's Jelly, donor1)
- 11549-120C1 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000349 (extraembryonic cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data