UBERON:0004923
From FANTOM5_SSTAR
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000064(organ part) |
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part_of: | UBERON:0000060(anatomical wall) |
Children
is a: | UBERON:0000158 (membranous layer),UBERON:0000344 (mucosa),UBERON:0001213 (intestinal villus),UBERON:0001295 (endometrium),UBERON:0001781 (layer of retina),UBERON:0004457 (cavity lining),UBERON:0004797 (blood vessel layer),UBERON:0005283 (tela choroidea),UBERON:0005742 (adventitia),UBERON:0005983 (heart layer),UBERON:0012430 (tunica fibrosa of eyeball),UBERON:0013754 (integumentary system layer),UBERON:0016548 (central nervous system gray matter layer) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10047-101G2 (tonsil, adult, pool1)
- 10252-104B9 (Ileum epithelium, pool1)
- 10253-104C1 (Ileum epithelium, pool2)
- 10254-104C2
- 10255-104C3
- 10256-104C4
- 10257-104C5
- 10258-104C6
- 10259-104C7
- 10260-104C8 (Ileum epithelium, treated with RANKL, day03, pool3)
... further results Mouse (Mus musculus)
- 10047-101G2 (tonsil, adult, pool1)
- 10252-104B9 (Ileum epithelium, pool1)
- 10253-104C1 (Ileum epithelium, pool2)
- 10254-104C2
- 10255-104C3
- 10256-104C4
- 10257-104C5
- 10258-104C6
- 10259-104C7
- 10260-104C8 (Ileum epithelium, treated with RANKL, day03, pool3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004923 (organ component layer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data