FFCP PHASE1:Hg19::chr1:243651083..243651106,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10806 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10671 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_ENST00000497459_5end | |||
|coexpression_cluster_id=C3957 | |||
|description=CAGE_peak_3_at_SDCCAG8_5end | |||
|id=chr1:243651083..243651106,+ | |||
|ontology_enrichment_celltype=CL:1000449!2.94e-10!16;CL:0000066!5.27e-10!254;CL:1000497!1.92e-08!18;CL:0002518!1.92e-08!18;CL:0002681!3.37e-08!13;CL:0002584!3.37e-08!13;CL:0000039!1.70e-07!7;CL:0000586!1.70e-07!7;CL:1000507!3.17e-07!12;CL:1000494!3.17e-07!12;CL:0002321!3.83e-07!248;CL:0002368!4.71e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;6.60e-17;15!CL:1000497;1.96e-14;17!CL:0002518;1.96e-14;17!CL:0002681;3.62e-13;12!CL:0002584;3.62e-13;12!CL:0002368;4.06e-12;13!CL:0000039;4.43e-12;7!CL:0000586;4.43e-12;7!CL:1000507;1.34e-10;10!CL:1000494;1.34e-10;10!CL:0002076;1.38e-10;42!CL:0002077;1.54e-10;34!CL:1000746;3.69e-10;7!CL:1000612;3.69e-10;7!CL:0002159;3.34e-09;14!CL:0002322;2.78e-08;5!CL:0002188;4.71e-08;5!CL:0002202;1.18e-07;9!CL:0002632;1.18e-07;9!CL:0000148;4.37e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.03e-27,253;CL:1000449,8.72e-17,15;CL:0002321,5.86e-15,250;CL:1000497,2.49e-14,17;CL:0002518,2.49e-14,17;CL:0002076,3.36e-13,42;CL:0002681,4.05e-13,12;CL:0002584,4.05e-13,12;CL:0002368,3.29e-12,13;CL:0000039,4.29e-12,7;CL:0000586,4.29e-12,7;CL:0000223,1.15e-11,58;CL:0002077,1.99e-11,34;CL:1000507,2.01e-10,10;CL:1000494,2.01e-10,10;CL:1000746,2.53e-10,7;CL:1000612,2.53e-10,7;CL:0002159,3.31e-09,14;CL:0002322,3.26e-08,5;CL:0002188,3.96e-08,5;CL:0002202,9.89e-08,9;CL:0002632,9.89e-08,9;CL:0000148,4.39e-07,10;CL:0000541,4.39e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000223;2.26e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006555!2.05e-10!17;UBERON:0005103!2.05e-10!17;UBERON:0000083!2.05e-10!17;UBERON:0009201!2.05e-10!17;UBERON:0004819!2.05e-10!17;UBERON:0006553!2.05e-10!17;UBERON:0003074!2.05e-10!17;UBERON:0003060!2.05e-10!17;UBERON:0004211!2.94e-10!16;UBERON:0001285!2.94e-10!16;UBERON:0007684!2.94e-10!16;UBERON:0003220!2.94e-10!16;UBERON:0004208!2.94e-10!16;UBERON:0000080!1.78e-09!18;UBERON:0002120!1.78e-09!18;UBERON:0004875!1.78e-09!18;UBERON:0005721!1.78e-09!18;UBERON:0005754!1.78e-09!18;UBERON:0007297!1.78e-09!18;UBERON:0004876!6.22e-09!20;UBERON:0001225!3.37e-08!13;UBERON:0008987!3.37e-08!13;UBERON:0003887!6.10e-08!21;UBERON:0009773!3.17e-07!12;UBERON:0001231!3.17e-07!12;UBERON:0004810!3.17e-07!12;UBERON:0007196!4.52e-07!14;UBERON:0001558!4.52e-07!14;UBERON:0000464!5.44e-07!104;UBERON:0006554!7.10e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.60e-17;15!UBERON:0004819;6.60e-17;15!UBERON:0001285;6.60e-17;15!UBERON:0007684;6.60e-17;15!UBERON:0001225;3.62e-13;12!UBERON:0008987;3.62e-13;12!UBERON:0004211;1.34e-10;10!UBERON:0009773;1.34e-10;10!UBERON:0001231;1.34e-10;10!UBERON:0004810;1.34e-10;10!UBERON:0006554;2.88e-10;30!UBERON:0001008;2.88e-10;30!UBERON:0000074;3.69e-10;7!UBERON:0001229;3.69e-10;7!UBERON:0001851;5.81e-10;15!UBERON:0000353;5.81e-10;15!UBERON:0003126;1.08e-09;7!UBERON:0001005;1.08e-09;7!UBERON:0007196;1.21e-09;15!UBERON:0001558;1.21e-09;15!UBERON:0002113;4.31e-09;24!UBERON:0011143;4.31e-09;24!UBERON:0000489;6.60e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,8.72e-17,15;UBERON:0009773,8.72e-17,15;UBERON:0001231,8.72e-17,15;UBERON:0001285,8.72e-17,15;UBERON:0007684,8.72e-17,15;UBERON:0004208,8.72e-17,15;UBERON:0006555,1.76e-15,16;UBERON:0004819,1.76e-15,16;UBERON:0001225,4.05e-13,12;UBERON:0008987,4.05e-13,12;UBERON:0004810,2.01e-10,10;UBERON:0010532,2.53e-10,7;UBERON:0000074,2.53e-10,7;UBERON:0001229,2.53e-10,7;UBERON:0001230,2.53e-10,7;UBERON:0003220,2.53e-10,7;UBERON:0005749,2.53e-10,7;UBERON:0004199,2.53e-10,7;UBERON:0004209,2.53e-10,7;UBERON:0004198,2.53e-10,7;UBERON:0001851,6.33e-10,15;UBERON:0000353,6.33e-10,15;UBERON:0007196,1.26e-09,15;UBERON:0001558,1.26e-09,15;UBERON:0003126,1.43e-09,7;UBERON:0001005,1.43e-09,7;UBERON:0005103,7.43e-09,8;UBERON:0000083,7.43e-09,8;UBERON:0009201,7.43e-09,8;UBERON:0006553,7.43e-09,8;UBERON:0003074,7.43e-09,8;UBERON:0003060,7.43e-09,8;UBERON:0006554,1.64e-08,47;UBERON:0001008,3.23e-08,48;UBERON:0002113,4.74e-08,26;UBERON:0003918,4.74e-08,26;UBERON:0011143,4.74e-08,26;UBERON:0005095,4.74e-08,26;UBERON:0007687,4.74e-08,26;UBERON:0000080,1.02e-07,9;UBERON:0002120,1.02e-07,9;UBERON:0004875,1.02e-07,9;UBERON:0005721,1.02e-07,9;UBERON:0005754,1.02e-07,9;UBERON:0007297,1.02e-07,9;UBERON:0005177,1.69e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.93174298402414,42.5658712463181,0.655324116390517,1.58260186937072,0.247532705920093,1.32558950291166,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,1.50651167513763,0,0,0,0,0.383829398097213,0,7.35536979583142,2.71085326900425,1.47901604066715,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0.512321413058201,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0.56738522469114,0,0,1.0429658368404,0.434377689410233,0,0,0,0.422510572623884,0.425208599930087,0,0.786300418025466,1.35159203557356,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0.294605907474837,0.221533894583621,0,0.128091319725675,0.130059347559878,0.493313713811028,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0.255973222308837,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.523916301990851,4.37154345951051,2.22470665670658,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.258416759169329,1.06729878806013,0.66944122552934,0,2.28081631715554,1.95249646038536,0.367663080345869,0,0,0.22452937262617,0.337834441449967,0,0,0,0,0,12.6467275121335,0,0,0,0,0,0.560677600142307,0,0,0,0.67355336034844,0.326923806226917,0.151357427644931,0,1.87457145467037,0,0.570471821544449,0.149448680551801,1.87895197830024,2.75184005425824,1.68540968042698,0,0.737005903870608,0,0,0,0.910161361938026,0.718618141816238,1.0100166837244,0.375355559615893,0,0,0,0,0.794025282120147,0,0,0.423863802319124,3.30100205692843,4.74041634496819,0.257640540045629,0.18611685633159,0,0,0,0.276149695926898,0,0,0.302256294682921,0.169560592310488,3.28543450377605,1.63647672354501,2.29443676311203,6.46460642486856,3.04818467139416,5.11253348625881,5.59769697083,10.0928340350251,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,0,1.26755034821831,0,0.590789906681404,0,0,0,2.41450627898976,3.37205259772859,4.92591964816991,1.66659201285353,0,0,0,0,0.234817388471643,1.29929802984966,1.85194205030644,3.80508304469197,0,0,0,0,0.297262324577456,9.3733833986777,0.335964256397719,3.68615252830205,0,0,0.383382679165211,0,0,0,0,0,4.63534628332834,5.34783795781589,2.34434894420094,6.84289784090821,0.102827492703324,0,0,0.448524337381443,0,0.07333828582095,0,0,0,0,0,3.34369586540785,1.41849132023278,4.52917704327369,0,0,0,0,0,0,0.301439377059586,0,2.49932477955143,0,0,0,0,0,1.42636905040718,0.144781306667579,0.821905290201534,0,0,0.197030760201927,0,0,0,0,0,0.502548796003046,0,0,0,0.414415513436035,0.24538298343828,1.00034104211935,1.08506009479894,0,0,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0.206768026122887,0.647142602455851,0.533637789017222,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,1.20303882181971,9.02393691571784,0.229628896329213,0,0,3.15839729035188,2.00239876471478,10.1965469992991,4.38417673959782,2.11103257785751,7.96133688496276,1.70093705276516,3.02282282542995,7.71136263451447,1.89662506280697,4.01351819083883,1.01950509218015,0.831076008928724,7.61174166055406,0,0,0,0,0,0.618246069886334,0,0,4.59412430396938,2.60024098414608,0,0.580024309752732,0.616194468458578,0,1.92971201478343,0.859361958946189,0.580066775656914,0.340906509664404,0.178064071293475,2.31398881505369,3.84380134730212,2.4246415373971,5.56367794705525,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0,0.767693373934002,0,0,0,1.07923474549989,0.54907405947211,0.353437207037059,0,0,0,1.95053495635836,0,0,0,0,1.13008116620243,0,2.65375590096488,1.31535265576129,2.31510213706675,3.9353685122798,0,0,0,0,0,0,0,0,0.329294892959902,0.75894634753143,0,4.61866141082458,6.70302275535787,15.2447378805852,0.282431402330337,0.86101074534246,3.36942951335251,3.99087138183008,3.21612760289743,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24568648489864,0,0,0,0,1.43246690842614,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,29.3031867255245,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,27.2065407177911,19.9261970589694,5.21507385225639,1.5950057986596,0.915975934018623,1.5991043280559,0,0,0,0,0.19606253431774,0.335643173951685,0,0,0,6.69254513452506,0,7.57360239097319,0,0.265372693510018,0,0,0,0,0.202203398942031,0,0.234264445725339,0,2.73930466504926,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,21.6303254982642,0,0,16.2667379707867,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0,0,0,0,2.54216797555244,0,0,0,0.864542502924636,0,0,0,0,7.77790314235425,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0,2.25054407851027,1.37539436597234,0,0,0.77380195455795,0.0607495566580247,23.4804281319486,0.157611414598396,0.3147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| |||
|short_description=p3@SDCCAG8 | |||
}} |
Revision as of 01:05, 11 January 2014
Short description: | p3@SDCCAG8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SDCCAG8_5end |
Coexpression cluster: | C3957_Alveolar_testicular_merkel_oral_carcinoid_mesothelioma_choriocarcinoma |
Association with transcript: | -10bp_to_ENST00000497459_5end |
EntrezGene: | SDCCAG8 |
HGNC: | 10671 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.03e-27 | 253 |
epithelial cell of nephron | 8.72e-17 | 15 |
embryonic cell | 5.86e-15 | 250 |
kidney cell | 2.49e-14 | 17 |
kidney epithelial cell | 2.49e-14 | 17 |
endo-epithelial cell | 3.36e-13 | 42 |
kidney cortical cell | 4.05e-13 | 12 |
renal cortical epithelial cell | 4.05e-13 | 12 |
respiratory epithelial cell | 3.29e-12 | 13 |
germ line cell | 4.29e-12 | 7 |
germ cell | 4.29e-12 | 7 |
endodermal cell | 1.15e-11 | 58 |
ecto-epithelial cell | 1.99e-11 | 34 |
kidney tubule cell | 2.01e-10 | 10 |
nephron tubule epithelial cell | 2.01e-10 | 10 |
glomerular cell | 2.53e-10 | 7 |
kidney corpuscule cell | 2.53e-10 | 7 |
general ecto-epithelial cell | 3.31e-09 | 14 |
embryonic stem cell | 3.26e-08 | 5 |
glomerular endothelial cell | 3.96e-08 | 5 |
epithelial cell of tracheobronchial tree | 9.89e-08 | 9 |
epithelial cell of lower respiratory tract | 9.89e-08 | 9 |
melanocyte | 4.39e-07 | 10 |
melanoblast | 4.39e-07 | 10 |