FFCP PHASE1:Hg19::chr20:6034576..6034592,-: Difference between revisions
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|ontology_enrichment_celltype=CL:1000497!4.87e-23!18;CL:0002518!4.87e-23!18;CL:1000449!5.80e-19!16;CL:1000507!1.32e-17!12;CL:1000494!1.32e-17!12;CL:0000077!5.14e-15!19;CL:0002681!1.68e-12!13;CL:0002584!1.68e-12!13;CL:0000066!1.44e-07!254;CL:0000632!9.22e-07!2 | |ontology_enrichment_celltype=CL:1000497!4.87e-23!18;CL:0002518!4.87e-23!18;CL:1000449!5.80e-19!16;CL:1000507!1.32e-17!12;CL:1000494!1.32e-17!12;CL:0000077!5.14e-15!19;CL:0002681!1.68e-12!13;CL:0002584!1.68e-12!13;CL:0000066!1.44e-07!254;CL:0000632!9.22e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:1000497;2.01e-46;17!CL:0002518;2.01e-46;17!CL:1000507;6.44e-46;10!CL:1000494;6.44e-46;10!CL:1000449;1.15e-44;15!CL:0002681;1.21e-29;12!CL:0002584;1.21e-29;12!CL:0000077;7.97e-19;19!CL:1000746;1.53e-13;7!CL:1000612;1.53e-13;7!CL:0000650;3.59e-13;2!CL:1000500;3.59e-13;2!CL:1000618;3.59e-13;2!CL:1001318;3.59e-13;2!CL:0002173;3.59e-13;2!CL:0000632;6.53e-09;3!CL:0000239;9.82e-09;3!CL:1000615;9.82e-09;3!CL:0002306;9.82e-09;3!CL:0000213;3.99e-07;58!CL:0000215;3.99e-07;58!CL:0000669;5.38e-07;4 | |ontology_enrichment_celltype_v019=CL:1000497;2.01e-46;17!CL:0002518;2.01e-46;17!CL:1000507;6.44e-46;10!CL:1000494;6.44e-46;10!CL:1000449;1.15e-44;15!CL:0002681;1.21e-29;12!CL:0002584;1.21e-29;12!CL:0000077;7.97e-19;19!CL:1000746;1.53e-13;7!CL:1000612;1.53e-13;7!CL:0000650;3.59e-13;2!CL:1000500;3.59e-13;2!CL:1000618;3.59e-13;2!CL:1001318;3.59e-13;2!CL:0002173;3.59e-13;2!CL:0000632;6.53e-09;3!CL:0000239;9.82e-09;3!CL:1000615;9.82e-09;3!CL:0002306;9.82e-09;3!CL:0000213;3.99e-07;58!CL:0000215;3.99e-07;58!CL:0000669;5.38e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.27e-46,17;CL:0002518,2.27e-46,17;CL:1000507,5.96e-46,10;CL:1000494,5.96e-46,10;CL:1000449,1.23e-44,15;CL:0002681,1.26e-29,12;CL:0002584,1.26e-29,12;CL:0000077,7.70e-19,19;CL:1000746,1.77e-13,7;CL:1000612,1.77e-13,7;CL:0000650,3.93e-13,2;CL:1000500,3.93e-13,2;CL:1000618,3.93e-13,2;CL:1001318,3.93e-13,2;CL:0002173,3.93e-13,2;CL:0000213,4.44e-10,58;CL:0000215,4.44e-10,58;CL:0000632,6.40e-09,3;CL:0000239,9.09e-09,3;CL:1000615,9.09e-09,3;CL:0002306,9.09e-09,3;CL:0000669,5.62e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:120!1.77e-15!27;DOID:193!3.64e-14!29;DOID:2394!5.96e-11!14 | |ontology_enrichment_disease=DOID:120!1.77e-15!27;DOID:193!3.64e-14!29;DOID:2394!5.96e-11!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.45e-10;14!DOID:120;4.37e-07;27 | |ontology_enrichment_disease_v019=DOID:2394;4.45e-10;14!DOID:120;4.37e-07;27 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,4.20e-10,14;DOID:120,4.22e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0005172!3.67e-23!55;UBERON:0005173!3.67e-23!55;UBERON:0002113!1.42e-21!27;UBERON:0003918!1.42e-21!27;UBERON:0005095!1.42e-21!27;UBERON:0007687!1.42e-21!27;UBERON:0006555!9.25e-21!17;UBERON:0005103!9.25e-21!17;UBERON:0000083!9.25e-21!17;UBERON:0009201!9.25e-21!17;UBERON:0004819!9.25e-21!17;UBERON:0006553!9.25e-21!17;UBERON:0003074!9.25e-21!17;UBERON:0003060!9.25e-21!17;UBERON:0002417!3.52e-20!61;UBERON:0000916!3.52e-20!61;UBERON:0000489!1.03e-19!32;UBERON:0000080!1.97e-19!18;UBERON:0002120!1.97e-19!18;UBERON:0004875!1.97e-19!18;UBERON:0005721!1.97e-19!18;UBERON:0005754!1.97e-19!18;UBERON:0007297!1.97e-19!18;UBERON:0004211!5.80e-19!16;UBERON:0001285!5.80e-19!16;UBERON:0007684!5.80e-19!16;UBERON:0003220!5.80e-19!16;UBERON:0004208!5.80e-19!16;UBERON:0009773!1.32e-17!12;UBERON:0001231!1.32e-17!12;UBERON:0004810!1.32e-17!12;UBERON:0004876!3.53e-17!20;UBERON:0000058!8.88e-17!26;UBERON:0003887!3.26e-16!21;UBERON:0006554!9.80e-15!44;UBERON:0001008!2.66e-14!45;UBERON:0005177!9.31e-14!107;UBERON:0000466!2.53e-13!126;UBERON:0003064!1.32e-12!37;UBERON:0001851!1.47e-12!16;UBERON:0001225!1.68e-12!13;UBERON:0008987!1.68e-12!13;UBERON:0009569!1.24e-11!113;UBERON:0000353!1.30e-11!17;UBERON:0003886!1.97e-11!63;UBERON:0003914!2.33e-11!118;UBERON:0003103!4.05e-11!69;UBERON:0002553!8.92e-10!70;UBERON:0009856!4.46e-09!26;UBERON:0009854!9.95e-09!23;UBERON:0000464!3.77e-08!104;UBERON:0005256!4.88e-08!143;UBERON:0007499!7.42e-08!25;UBERON:0009497!7.55e-08!25;UBERON:0000015!7.55e-08!25;UBERON:0002423!7.55e-08!25;UBERON:0006235!7.55e-08!25;UBERON:0004161!7.55e-08!25;UBERON:0008835!1.78e-07!22;UBERON:0003894!1.78e-07!22;UBERON:0003104!2.72e-07!238;UBERON:0009142!2.72e-07!238;UBERON:0003134!4.02e-07!37;UBERON:0000474!4.02e-07!37;UBERON:0002100!4.21e-07!216 | |ontology_enrichment_uberon=UBERON:0005172!3.67e-23!55;UBERON:0005173!3.67e-23!55;UBERON:0002113!1.42e-21!27;UBERON:0003918!1.42e-21!27;UBERON:0005095!1.42e-21!27;UBERON:0007687!1.42e-21!27;UBERON:0006555!9.25e-21!17;UBERON:0005103!9.25e-21!17;UBERON:0000083!9.25e-21!17;UBERON:0009201!9.25e-21!17;UBERON:0004819!9.25e-21!17;UBERON:0006553!9.25e-21!17;UBERON:0003074!9.25e-21!17;UBERON:0003060!9.25e-21!17;UBERON:0002417!3.52e-20!61;UBERON:0000916!3.52e-20!61;UBERON:0000489!1.03e-19!32;UBERON:0000080!1.97e-19!18;UBERON:0002120!1.97e-19!18;UBERON:0004875!1.97e-19!18;UBERON:0005721!1.97e-19!18;UBERON:0005754!1.97e-19!18;UBERON:0007297!1.97e-19!18;UBERON:0004211!5.80e-19!16;UBERON:0001285!5.80e-19!16;UBERON:0007684!5.80e-19!16;UBERON:0003220!5.80e-19!16;UBERON:0004208!5.80e-19!16;UBERON:0009773!1.32e-17!12;UBERON:0001231!1.32e-17!12;UBERON:0004810!1.32e-17!12;UBERON:0004876!3.53e-17!20;UBERON:0000058!8.88e-17!26;UBERON:0003887!3.26e-16!21;UBERON:0006554!9.80e-15!44;UBERON:0001008!2.66e-14!45;UBERON:0005177!9.31e-14!107;UBERON:0000466!2.53e-13!126;UBERON:0003064!1.32e-12!37;UBERON:0001851!1.47e-12!16;UBERON:0001225!1.68e-12!13;UBERON:0008987!1.68e-12!13;UBERON:0009569!1.24e-11!113;UBERON:0000353!1.30e-11!17;UBERON:0003886!1.97e-11!63;UBERON:0003914!2.33e-11!118;UBERON:0003103!4.05e-11!69;UBERON:0002553!8.92e-10!70;UBERON:0009856!4.46e-09!26;UBERON:0009854!9.95e-09!23;UBERON:0000464!3.77e-08!104;UBERON:0005256!4.88e-08!143;UBERON:0007499!7.42e-08!25;UBERON:0009497!7.55e-08!25;UBERON:0000015!7.55e-08!25;UBERON:0002423!7.55e-08!25;UBERON:0006235!7.55e-08!25;UBERON:0004161!7.55e-08!25;UBERON:0008835!1.78e-07!22;UBERON:0003894!1.78e-07!22;UBERON:0003104!2.72e-07!238;UBERON:0009142!2.72e-07!238;UBERON:0003134!4.02e-07!37;UBERON:0000474!4.02e-07!37;UBERON:0002100!4.21e-07!216 | ||
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| ||
|short_description=p3@LRRN4 | |short_description=p3@LRRN4 | ||
}} | }} |
Revision as of 22:29, 17 November 2012
Short description: | p3@LRRN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LRRN4_5end |
Coexpression cluster: | C548_Mesothelial_mesenchymal_rhabdomyosarcoma_Renal_mesothelioma_Hepatic_clear |
Association with transcript: | 101bp_to_NM_152611, uc002wmo.2, uc002wmp.2_5end |
EntrezGene: | LRRN4 |
HGNC: | 16208 |
UniProt: | Q8WUT4Q6ZMD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.27e-46 | 17 |
kidney epithelial cell | 2.27e-46 | 17 |
kidney tubule cell | 5.96e-46 | 10 |
nephron tubule epithelial cell | 5.96e-46 | 10 |
epithelial cell of nephron | 1.23e-44 | 15 |
kidney cortical cell | 1.26e-29 | 12 |
renal cortical epithelial cell | 1.26e-29 | 12 |
mesothelial cell | 7.70e-19 | 19 |
glomerular cell | 1.77e-13 | 7 |
kidney corpuscule cell | 1.77e-13 | 7 |
mesangial cell | 3.93e-13 | 2 |
kidney interstitial cell | 3.93e-13 | 2 |
juxtaglomerular complex cell | 3.93e-13 | 2 |
renal interstitial pericyte | 3.93e-13 | 2 |
extraglomerular mesangial cell | 3.93e-13 | 2 |
lining cell | 4.44e-10 | 58 |
barrier cell | 4.44e-10 | 58 |
hepatic stellate cell | 6.40e-09 | 3 |
brush border epithelial cell | 9.09e-09 | 3 |
kidney cortex tubule cell | 9.09e-09 | 3 |
epithelial cell of proximal tubule | 9.09e-09 | 3 |
pericyte cell | 5.62e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.20e-10 | 14 |
female reproductive organ cancer | 4.22e-07 | 27 |
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