FFCP PHASE1:Hg19::chr17:46703826..46703845,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3219 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5120 | |||
|TSSclassifier=strong | |||
|UniProt=P17482,F8W0V6,B3KPJ1 | |||
|association_with_transcript=0bp_to_ENST00000311177,ENST00000550387,NM_024017,uc002inx.2_5end | |||
|description=CAGE_peak_3_at_HOXB9_5end | |||
|id=chr17:46703826..46703845,- | |||
|ontology_enrichment_celltype=CL:1000507!8.09e-14!12;CL:1000494!8.09e-14!12;CL:1000497!4.91e-13!18;CL:0002518!4.91e-13!18;CL:1000449!5.79e-13!16;CL:0000066!9.17e-12!254;CL:0002681!2.84e-09!13;CL:0002584!2.84e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.60e-31;10!CL:1000494;2.60e-31;10!CL:1000497;8.15e-25;17!CL:0002518;8.15e-25;17!CL:1000449;5.02e-24;15!CL:0002681;8.03e-16;12!CL:0002584;8.03e-16;12!CL:0000239;9.23e-11;3!CL:1000615;9.23e-11;3!CL:0002306;9.23e-11;3!CL:0000650;3.93e-07;2!CL:1000500;3.93e-07;2!CL:1000618;3.93e-07;2!CL:1001318;3.93e-07;2!CL:0002173;3.93e-07;2!CL:0000244;7.58e-07;4!CL:0000731;7.58e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.39e-31,10;CL:1000494,2.39e-31,10;CL:1000497,9.54e-25,17;CL:0002518,9.54e-25,17;CL:1000449,5.78e-24,15;CL:0002681,9.18e-16,12;CL:0002584,9.18e-16,12;CL:0000239,9.41e-11,3;CL:1000615,9.41e-11,3;CL:0002306,9.41e-11,3;CL:0000650,3.70e-07,2;CL:1000500,3.70e-07,2;CL:1000618,3.70e-07,2;CL:1001318,3.70e-07,2;CL:0002173,3.70e-07,2;CL:0000244,8.09e-07,4;CL:0000731,8.09e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.50e-10;10!UBERON:0007687;1.50e-10;10!UBERON:0007297;5.02e-07;2 | |||
|ontology_enrichment_disease=DOID:14566!9.44e-18!239;DOID:162!3.98e-17!235;DOID:0050687!1.19e-13!143;DOID:305!4.57e-10!106;DOID:0050686!1.45e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1115;3.85e-08;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,3.54e-08,20;DOID:14566,1.04e-07,239;DOID:162,8.89e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0006554!4.64e-21!44;UBERON:0001008!2.39e-20!45;UBERON:0000489!2.00e-19!32;UBERON:0002113!8.06e-17!27;UBERON:0003918!8.06e-17!27;UBERON:0005095!8.06e-17!27;UBERON:0007687!8.06e-17!27;UBERON:0000058!1.64e-15!26;UBERON:0000080!3.23e-15!18;UBERON:0002120!3.23e-15!18;UBERON:0004875!3.23e-15!18;UBERON:0005721!3.23e-15!18;UBERON:0005754!3.23e-15!18;UBERON:0007297!3.23e-15!18;UBERON:0003064!4.79e-15!37;UBERON:0006555!4.18e-14!17;UBERON:0005103!4.18e-14!17;UBERON:0000083!4.18e-14!17;UBERON:0009201!4.18e-14!17;UBERON:0004819!4.18e-14!17;UBERON:0006553!4.18e-14!17;UBERON:0003074!4.18e-14!17;UBERON:0003060!4.18e-14!17;UBERON:0009773!8.09e-14!12;UBERON:0001231!8.09e-14!12;UBERON:0004810!8.09e-14!12;UBERON:0004876!3.54e-13!20;UBERON:0004211!5.79e-13!16;UBERON:0001285!5.79e-13!16;UBERON:0007684!5.79e-13!16;UBERON:0003220!5.79e-13!16;UBERON:0004208!5.79e-13!16;UBERON:0002417!1.67e-12!61;UBERON:0000916!1.67e-12!61;UBERON:0003887!2.62e-12!21;UBERON:0001851!2.49e-11!16;UBERON:0005177!5.09e-11!107;UBERON:0005172!1.25e-10!55;UBERON:0005173!1.25e-10!55;UBERON:0003886!7.14e-10!63;UBERON:0002553!2.34e-09!70;UBERON:0001225!2.84e-09!13;UBERON:0008987!2.84e-09!13;UBERON:0000464!1.05e-08!104;UBERON:0000353!8.02e-08!17;UBERON:0000466!1.49e-07!126;UBERON:0005910!1.63e-07!6;UBERON:0009569!2.17e-07!113;UBERON:0000365!6.29e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.52e-36;30!UBERON:0001008;1.52e-36;30!UBERON:0004211;2.60e-31;10!UBERON:0009773;2.60e-31;10!UBERON:0001231;2.60e-31;10!UBERON:0004810;2.60e-31;10!UBERON:0000489;3.86e-31;29!UBERON:0002113;3.17e-30;24!UBERON:0011143;3.17e-30;24!UBERON:0006555;5.02e-24;15!UBERON:0004819;5.02e-24;15!UBERON:0001285;5.02e-24;15!UBERON:0007684;5.02e-24;15!UBERON:0001225;8.03e-16;12!UBERON:0008987;8.03e-16;12!UBERON:0001851;2.34e-12;15!UBERON:0000353;2.34e-12;15!UBERON:0005172;5.82e-12;52!UBERON:0005173;5.82e-12;52!UBERON:0006853;9.23e-11;3!UBERON:0007685;9.23e-11;3!UBERON:0004134;9.23e-11;3!UBERON:0006947;1.80e-09;3!UBERON:0004054;1.80e-09;3!UBERON:0000365;2.40e-09;5!UBERON:0002417;4.51e-09;58!UBERON:0000916;4.51e-09;58!UBERON:0005177;8.06e-08;99!UBERON:0005910;8.51e-08;6!UBERON:0000058;2.92e-07;10!UBERON:0003103;3.05e-07;61!UBERON:0005904;3.35e-07;4!UBERON:0003567;3.93e-07;2!UBERON:0003838;3.93e-07;2!UBERON:0003586;3.93e-07;2!UBERON:0005169;3.93e-07;2!UBERON:0002321;3.93e-07;2!UBERON:0005215;3.93e-07;2!UBERON:0002303;3.93e-07;2!UBERON:0002319;3.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.09e-35,31;UBERON:0002113,5.89e-35,26;UBERON:0003918,5.89e-35,26;UBERON:0011143,5.89e-35,26;UBERON:0005095,5.89e-35,26;UBERON:0007687,5.89e-35,26;UBERON:0004810,2.39e-31,10;UBERON:0006554,1.29e-28,47;UBERON:0001008,6.89e-28,48;UBERON:0006555,1.57e-26,16;UBERON:0004819,1.57e-26,16;UBERON:0004211,5.78e-24,15;UBERON:0009773,5.78e-24,15;UBERON:0001231,5.78e-24,15;UBERON:0001285,5.78e-24,15;UBERON:0007684,5.78e-24,15;UBERON:0004208,5.78e-24,15;UBERON:0005172,8.52e-20,54;UBERON:0005173,8.52e-20,54;UBERON:0002417,4.37e-19,60;UBERON:0000916,4.37e-19,60;UBERON:0001225,9.18e-16,12;UBERON:0008987,9.18e-16,12;UBERON:0005177,2.13e-15,101;UBERON:0003103,2.46e-13,68;UBERON:0001851,2.60e-12,15;UBERON:0000353,2.60e-12,15;UBERON:0009569,6.27e-12,112;UBERON:0006853,9.41e-11,3;UBERON:0007685,9.41e-11,3;UBERON:0004134,9.41e-11,3;UBERON:0006947,1.22e-09,3;UBERON:0004054,1.22e-09,3;UBERON:0000365,2.69e-09,5;UBERON:0000058,8.63e-09,19;UBERON:0000080,4.33e-08,9;UBERON:0002120,4.33e-08,9;UBERON:0004875,4.33e-08,9;UBERON:0005721,4.33e-08,9;UBERON:0005754,4.33e-08,9;UBERON:0007297,4.33e-08,9;UBERON:0005910,9.36e-08,6;UBERON:0005904,2.52e-07,4;UBERON:0003567,3.70e-07,2;UBERON:0003838,3.70e-07,2;UBERON:0003586,3.70e-07,2;UBERON:0005169,3.70e-07,2;UBERON:0002321,3.70e-07,2;UBERON:0005215,3.70e-07,2;UBERON:0002303,3.70e-07,2;UBERON:0002319,3.70e-07,2 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0.910161361938026,2.87447256726495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.584622030967192,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.310983165046111,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571652865261156,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,1.08506009479894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640695746278505,0.511707249066704,1.60853921143608,0,0,0,0,0,0,1.20859449591622,0,0.184161977871793,0,0,0,4.96319574198153,18.2526348937463,18.8243944602445,17.5367069583913,33.2487631012558,1.13733384070897,0.510281115829547,0.215915916102139,0,2.43851793789468,3.51182841698397,6.11703055308092,16.6215201785745,19.4771036608295,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.573645408816206,0.392996164052485,0.35667105148125,0,0,0,0,0,0,0,0,0,1.29151611801369,1.68471475667626,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0,0,0,3.51592382018778,0,0,0.18714054040822,0,0.121360521749513,0.66866030566487,8.52408440419239,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0.920418142519393,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0.762569244632931,0.278847488557207,0.307801034015188,0.797594390929008,0,0,0,0,0,0.533034776018635,0,0,0,5.41429585481234,9.01887657861602,5.20246919625112,0.569261198172555,0,0,0,0,0,0,0.265372693510018,3.05515072466813,8.00607047437679,5.31324937469962,4.17687798021822,0,0,0,0,0,8.74009366322734,1.97292201424695,0,0,0,9.16972858428404,2.48851659353393,0,0.661983911750998,0,0,4.55375273647668,1.8027707491708,0,0.0979923974143777,0.174118413160805,2.79562669187248,0.51595809741485,0,0,0,0,0,0,2.05562886970126,0,0,0,1.12222348352147,0,0.39961921916426,0.576361668616424,1.83258553865465,1.71594997861965,0.576219191952599,1.36677789121976,0.235694034616795,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,1.77169466726548,0,0,0,0,0,0,0,0,0,0,1.02447419488958,6.39945975246977,0.422401346077626,0.537862017998534,0.383830394638891,0,0,0,0,0,0,2.39460383124975,0.164185041498678,0.340776043570843,0.906496732161005,0,0,0,0,0.342173675768659,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0.758245587708239,1.42732666772484,0.705797459094515,0,4.0577888011031,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,1.59505028734797,0,0.300515217994437,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0.57785949122191,0.214441591374926,1.04397716786085,0,0.231522474323834,0.97894681802587,0,0,0.438568099157414,1.59020231351293,0.771656153083659,0,0,0,0,0,0,0,0,1.96565909307848,0,0.845248493434508,0,0.213383459388282,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0,0,0,0,52.0370986385555,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0.0752103283492573,3.42898616795984,0,0,0,1.47856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0.472775363535873,0.111231401892069,0.235479278551542,0,3.36326595976547,0.913158720509496,0,2.38875843943525,0,0,1.27865567904938,1.56472445072321,0,0.207216164163037,0,0,0,2.12997601315018,1.70426809518315,2.11693525095465,0.22910686854405,0.93061915699296,0,0,0.392600934460972,0,0,0,0,0,1.63757624423474,0,0,2.48481380485712,0,24.7579063449345,0,0,0,0,22.3892719746545,0,0.297046400327086,8.0304588240846,0,0,0,0,0.178553938605658,0,0,0,0,0,1.73548718412503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,2.19788825249631,0.213454691755431,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p3@HOXB9 | |||
}} |
Revision as of 16:02, 20 January 2014
Short description: | p3@HOXB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXB9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000311177, ENST00000550387, NM_024017, uc002inx.2_5end |
EntrezGene: | HOXB9 |
HGNC: | 5120 |
UniProt: | P17482F8W0V6B3KPJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.39e-31 | 10 |
nephron tubule epithelial cell | 2.39e-31 | 10 |
kidney cell | 9.54e-25 | 17 |
kidney epithelial cell | 9.54e-25 | 17 |
epithelial cell of nephron | 5.78e-24 | 15 |
kidney cortical cell | 9.18e-16 | 12 |
renal cortical epithelial cell | 9.18e-16 | 12 |
brush border epithelial cell | 9.41e-11 | 3 |
kidney cortex tubule cell | 9.41e-11 | 3 |
epithelial cell of proximal tubule | 9.41e-11 | 3 |
mesangial cell | 3.70e-07 | 2 |
kidney interstitial cell | 3.70e-07 | 2 |
juxtaglomerular complex cell | 3.70e-07 | 2 |
renal interstitial pericyte | 3.70e-07 | 2 |
extraglomerular mesangial cell | 3.70e-07 | 2 |
transitional epithelial cell | 8.09e-07 | 4 |
urothelial cell | 8.09e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 3.54e-08 | 20 |
disease of cellular proliferation | 1.04e-07 | 239 |
cancer | 8.89e-07 | 235 |