FFCP PHASE1:Hg19::chr20:6033494..6033509,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-45bp_to_AB527789_5end|coexpression_cluster_id=C548|description=CAGE_peak_5_at_AB527789_5end|id=chr20:6033494..6033509,-|ontology_enrichment_celltype=CL:1000449!2.33e-22!16;CL:1000507!1.01e-20!12;CL:1000494!1.01e-20!12;CL:1000497!1.38e-19!18;CL:0002518!1.38e-19!18;CL:0002681!1.12e-14!13;CL:0002584!1.12e-14!13;CL:0000239!1.07e-10!3;CL:1000615!1.07e-10!3;CL:0002306!1.07e-10!3;CL:0000077!1.24e-09!19;CL:1000612!1.74e-07!7;CL:1000746!1.74e-07!7|ontology_enrichment_celltype_v019=CL:1000507;2.70e-39;10!CL:1000494;2.70e-39;10!CL:1000449;3.94e-26;15!CL:1000497;4.99e-23;17!CL:0002518;4.99e-23;17!CL:0000650;6.10e-23;2!CL:1000500;6.10e-23;2!CL:1000618;6.10e-23;2!CL:1001318;6.10e-23;2!CL:0002173;6.10e-23;2!CL:0000239;6.48e-16;3!CL:1000615;6.48e-16;3!CL:0002306;6.48e-16;3!CL:0002681;4.66e-15;12!CL:0002584;4.66e-15;12!CL:0000669;5.70e-12;4!CL:0000077;1.29e-09;19!CL:1000746;3.24e-07;7!CL:1000612;3.24e-07;7!CL:0002253;8.28e-07;2|ontology_enrichment_celltype_v019_2=CL:1000507,3.67e-39,10;CL:1000494,3.67e-39,10;CL:1000449,4.82e-26,15;CL:1000497,5.96e-23,17;CL:0002518,5.96e-23,17;CL:0000650,1.49e-22,2;CL:1000500,1.49e-22,2;CL:1000618,1.49e-22,2;CL:1001318,1.49e-22,2;CL:0002173,1.49e-22,2;CL:0000239,7.83e-16,3;CL:1000615,7.83e-16,3;CL:0002306,7.83e-16,3;CL:0002681,6.84e-15,12;CL:0002584,6.84e-15,12;CL:0000669,8.87e-12,4;CL:0000077,1.19e-09,19;CL:1000746,4.16e-07,7;CL:1000612,4.16e-07,7|ontology_enrichment_development_v019=UBERON:0010122;8.28e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;9.89e-08;14|ontology_enrichment_disease_v019_2=DOID:2394,7.49e-08,14|ontology_enrichment_uberon=UBERON:0006555!7.85e-25!17;UBERON:0005103!7.85e-25!17;UBERON:0000083!7.85e-25!17;UBERON:0009201!7.85e-25!17;UBERON:0004819!7.85e-25!17;UBERON:0006553!7.85e-25!17;UBERON:0003074!7.85e-25!17;UBERON:0003060!7.85e-25!17;UBERON:0000080!2.74e-23!18;UBERON:0002120!2.74e-23!18;UBERON:0004875!2.74e-23!18;UBERON:0005721!2.74e-23!18;UBERON:0005754!2.74e-23!18;UBERON:0007297!2.74e-23!18;UBERON:0004211!2.33e-22!16;UBERON:0001285!2.33e-22!16;UBERON:0007684!2.33e-22!16;UBERON:0003220!2.33e-22!16;UBERON:0004208!2.33e-22!16;UBERON:0009773!1.01e-20!12;UBERON:0001231!1.01e-20!12;UBERON:0004810!1.01e-20!12;UBERON:0004876!1.15e-20!20;UBERON:0002113!9.85e-20!27;UBERON:0003918!9.85e-20!27;UBERON:0005095!9.85e-20!27;UBERON:0007687!9.85e-20!27;UBERON:0003887!1.52e-19!21;UBERON:0000058!6.74e-18!26;UBERON:0000489!4.20e-16!32;UBERON:0001851!1.07e-14!16;UBERON:0003886!1.10e-14!63;UBERON:0001225!1.12e-14!13;UBERON:0008987!1.12e-14!13;UBERON:0005172!7.45e-14!55;UBERON:0005173!7.45e-14!55;UBERON:0003064!9.08e-14!37;UBERON:0002553!1.04e-12!70;UBERON:0006554!1.30e-12!44;UBERON:0001008!2.98e-12!45;UBERON:0002417!4.75e-12!61;UBERON:0000916!4.75e-12!61;UBERON:0000353!7.10e-11!17;UBERON:0006853!1.07e-10!3;UBERON:0007685!1.07e-10!3;UBERON:0004134!1.07e-10!3;UBERON:0000464!8.96e-10!104;UBERON:0000466!9.17e-10!126;UBERON:0003103!7.72e-09!69;UBERON:0000369!7.83e-08!4;UBERON:0002435!7.83e-08!4;UBERON:0000204!7.83e-08!4;UBERON:0010082!7.83e-08!4;UBERON:0000074!1.74e-07!7;UBERON:0001229!1.74e-07!7;UBERON:0001230!1.74e-07!7;UBERON:0005749!1.74e-07!7;UBERON:0004199!1.74e-07!7;UBERON:0004209!1.74e-07!7;UBERON:0004198!1.74e-07!7;UBERON:0005177!2.04e-07!107;UBERON:0009663!2.57e-07!7;UBERON:0009569!8.95e-07!113|ontology_enrichment_uberon_v019=UBERON:0004211;2.70e-39;10!UBERON:0009773;2.70e-39;10!UBERON:0001231;2.70e-39;10!UBERON:0004810;2.70e-39;10!UBERON:0006555;3.94e-26;15!UBERON:0004819;3.94e-26;15!UBERON:0001285;3.94e-26;15!UBERON:0007684;3.94e-26;15!UBERON:0003567;6.10e-23;2!UBERON:0003838;6.10e-23;2!UBERON:0003586;6.10e-23;2!UBERON:0005169;6.10e-23;2!UBERON:0002321;6.10e-23;2!UBERON:0005215;6.10e-23;2!UBERON:0002303;6.10e-23;2!UBERON:0002319;6.10e-23;2!UBERON:0002113;3.15e-16;24!UBERON:0011143;3.15e-16;24!UBERON:0006853;6.48e-16;3!UBERON:0007685;6.48e-16;3!UBERON:0004134;6.48e-16;3!UBERON:0005383;1.22e-15;3!UBERON:0005382;1.22e-15;3!UBERON:0001225;4.66e-15;12!UBERON:0008987;4.66e-15;12!UBERON:0000489;2.25e-13;29!UBERON:0006554;6.46e-13;30!UBERON:0001008;6.46e-13;30!UBERON:0001874;2.32e-12;1!UBERON:0001851;4.25e-12;15!UBERON:0000353;4.25e-12;15!UBERON:0000369;5.70e-12;4!UBERON:0002435;5.70e-12;4!UBERON:0003891;5.70e-12;4!UBERON:0000204;5.70e-12;4!UBERON:0009663;3.24e-07;7!UBERON:0000074;3.24e-07;7!UBERON:0001229;3.24e-07;7!UBERON:0001873;8.28e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.67e-39,10;UBERON:0004211,4.82e-26,15;UBERON:0009773,4.82e-26,15;UBERON:0001231,4.82e-26,15;UBERON:0001285,4.82e-26,15;UBERON:0007684,4.82e-26,15;UBERON:0004208,4.82e-26,15;UBERON:0006555,2.11e-24,16;UBERON:0004819,2.11e-24,16;UBERON:0003567,1.49e-22,2;UBERON:0003838,1.49e-22,2;UBERON:0003586,1.49e-22,2;UBERON:0005169,1.49e-22,2;UBERON:0002321,1.49e-22,2;UBERON:0005215,1.49e-22,2;UBERON:0002303,1.49e-22,2;UBERON:00023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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-45bp_to_AB527789_5end | |||
|coexpression_cluster_id=C548 | |||
|description=CAGE_peak_5_at_AB527789_5end | |||
|id=chr20:6033494..6033509,- | |||
|ontology_enrichment_celltype=CL:1000449!2.33e-22!16;CL:1000507!1.01e-20!12;CL:1000494!1.01e-20!12;CL:1000497!1.38e-19!18;CL:0002518!1.38e-19!18;CL:0002681!1.12e-14!13;CL:0002584!1.12e-14!13;CL:0000239!1.07e-10!3;CL:1000615!1.07e-10!3;CL:0002306!1.07e-10!3;CL:0000077!1.24e-09!19;CL:1000612!1.74e-07!7;CL:1000746!1.74e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.70e-39;10!CL:1000494;2.70e-39;10!CL:1000449;3.94e-26;15!CL:1000497;4.99e-23;17!CL:0002518;4.99e-23;17!CL:0000650;6.10e-23;2!CL:1000500;6.10e-23;2!CL:1000618;6.10e-23;2!CL:1001318;6.10e-23;2!CL:0002173;6.10e-23;2!CL:0000239;6.48e-16;3!CL:1000615;6.48e-16;3!CL:0002306;6.48e-16;3!CL:0002681;4.66e-15;12!CL:0002584;4.66e-15;12!CL:0000669;5.70e-12;4!CL:0000077;1.29e-09;19!CL:1000746;3.24e-07;7!CL:1000612;3.24e-07;7!CL:0002253;8.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.67e-39,10;CL:1000494,3.67e-39,10;CL:1000449,4.82e-26,15;CL:1000497,5.96e-23,17;CL:0002518,5.96e-23,17;CL:0000650,1.49e-22,2;CL:1000500,1.49e-22,2;CL:1000618,1.49e-22,2;CL:1001318,1.49e-22,2;CL:0002173,1.49e-22,2;CL:0000239,7.83e-16,3;CL:1000615,7.83e-16,3;CL:0002306,7.83e-16,3;CL:0002681,6.84e-15,12;CL:0002584,6.84e-15,12;CL:0000669,8.87e-12,4;CL:0000077,1.19e-09,19;CL:1000746,4.16e-07,7;CL:1000612,4.16e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0010122;8.28e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.89e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.49e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0006555!7.85e-25!17;UBERON:0005103!7.85e-25!17;UBERON:0000083!7.85e-25!17;UBERON:0009201!7.85e-25!17;UBERON:0004819!7.85e-25!17;UBERON:0006553!7.85e-25!17;UBERON:0003074!7.85e-25!17;UBERON:0003060!7.85e-25!17;UBERON:0000080!2.74e-23!18;UBERON:0002120!2.74e-23!18;UBERON:0004875!2.74e-23!18;UBERON:0005721!2.74e-23!18;UBERON:0005754!2.74e-23!18;UBERON:0007297!2.74e-23!18;UBERON:0004211!2.33e-22!16;UBERON:0001285!2.33e-22!16;UBERON:0007684!2.33e-22!16;UBERON:0003220!2.33e-22!16;UBERON:0004208!2.33e-22!16;UBERON:0009773!1.01e-20!12;UBERON:0001231!1.01e-20!12;UBERON:0004810!1.01e-20!12;UBERON:0004876!1.15e-20!20;UBERON:0002113!9.85e-20!27;UBERON:0003918!9.85e-20!27;UBERON:0005095!9.85e-20!27;UBERON:0007687!9.85e-20!27;UBERON:0003887!1.52e-19!21;UBERON:0000058!6.74e-18!26;UBERON:0000489!4.20e-16!32;UBERON:0001851!1.07e-14!16;UBERON:0003886!1.10e-14!63;UBERON:0001225!1.12e-14!13;UBERON:0008987!1.12e-14!13;UBERON:0005172!7.45e-14!55;UBERON:0005173!7.45e-14!55;UBERON:0003064!9.08e-14!37;UBERON:0002553!1.04e-12!70;UBERON:0006554!1.30e-12!44;UBERON:0001008!2.98e-12!45;UBERON:0002417!4.75e-12!61;UBERON:0000916!4.75e-12!61;UBERON:0000353!7.10e-11!17;UBERON:0006853!1.07e-10!3;UBERON:0007685!1.07e-10!3;UBERON:0004134!1.07e-10!3;UBERON:0000464!8.96e-10!104;UBERON:0000466!9.17e-10!126;UBERON:0003103!7.72e-09!69;UBERON:0000369!7.83e-08!4;UBERON:0002435!7.83e-08!4;UBERON:0000204!7.83e-08!4;UBERON:0010082!7.83e-08!4;UBERON:0000074!1.74e-07!7;UBERON:0001229!1.74e-07!7;UBERON:0001230!1.74e-07!7;UBERON:0005749!1.74e-07!7;UBERON:0004199!1.74e-07!7;UBERON:0004209!1.74e-07!7;UBERON:0004198!1.74e-07!7;UBERON:0005177!2.04e-07!107;UBERON:0009663!2.57e-07!7;UBERON:0009569!8.95e-07!113 | |||
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|short_description=p5@AB527789 | |||
}} |
Revision as of 09:28, 12 September 2013
Short description: | p5@AB527789 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_AB527789_5end |
Coexpression cluster: | C548_Mesothelial_mesenchymal_rhabdomyosarcoma_Renal_mesothelioma_Hepatic_clear |
Association with transcript: | -45bp_to_AB527789_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.67e-39 | 10 |
nephron tubule epithelial cell | 3.67e-39 | 10 |
epithelial cell of nephron | 4.82e-26 | 15 |
kidney cell | 5.96e-23 | 17 |
kidney epithelial cell | 5.96e-23 | 17 |
mesangial cell | 1.49e-22 | 2 |
kidney interstitial cell | 1.49e-22 | 2 |
juxtaglomerular complex cell | 1.49e-22 | 2 |
renal interstitial pericyte | 1.49e-22 | 2 |
extraglomerular mesangial cell | 1.49e-22 | 2 |
brush border epithelial cell | 7.83e-16 | 3 |
kidney cortex tubule cell | 7.83e-16 | 3 |
epithelial cell of proximal tubule | 7.83e-16 | 3 |
kidney cortical cell | 6.84e-15 | 12 |
renal cortical epithelial cell | 6.84e-15 | 12 |
pericyte cell | 8.87e-12 | 4 |
mesothelial cell | 1.19e-09 | 19 |
glomerular cell | 4.16e-07 | 7 |
kidney corpuscule cell | 4.16e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.49e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.