FFCP PHASE1:Hg19::chr17:46703687..46703740,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3219 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5120 | |||
|TSSclassifier=strong | |||
|UniProt=B3KPJ1 | |||
|association_with_transcript=0bp_to_ENST00000442657_5end | |||
|description=CAGE_peak_1_at_HOXB9_5end | |||
|id=chr17:46703687..46703740,- | |||
|ontology_enrichment_celltype=CL:0000066!8.32e-17!254;CL:1000497!7.31e-13!18;CL:0002518!7.31e-13!18;CL:1000449!6.32e-12!16;CL:1000507!4.88e-11!12;CL:1000494!4.88e-11!12;CL:0002681!6.38e-09!13;CL:0002584!6.38e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;7.01e-20;15!CL:1000497;3.01e-19;17!CL:0002518;3.01e-19;17!CL:1000507;1.16e-17;10!CL:1000494;1.16e-17;10!CL:0002681;4.73e-15;12!CL:0002584;4.73e-15;12!CL:1000746;1.88e-07;7!CL:1000612;1.88e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,8.54e-20,15;CL:1000497,3.47e-19,17;CL:0002518,3.47e-19,17;CL:1000507,1.17e-17,10;CL:1000494,1.17e-17,10;CL:0002681,5.70e-15,12;CL:0002584,5.70e-15,12;CL:0000066,2.85e-14,253;CL:1000746,2.21e-07,7;CL:1000612,2.21e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.97e-30!239;DOID:162!1.23e-29!235;DOID:0050687!5.56e-24!143;DOID:305!2.15e-18!106;DOID:0050686!1.39e-09!137;DOID:0050615!6.92e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.37e-08;15!DOID:0050615;6.62e-08;16!DOID:3119;9.82e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.18e-22,239;DOID:162,8.80e-22,235;DOID:0050687,7.72e-18,143;DOID:305,2.17e-12,106;DOID:0050686,2.01e-09,137;DOID:1324,1.35e-08,15;DOID:0050615,6.55e-08,16;DOID:3119,9.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000489!5.62e-19!32;UBERON:0006554!9.34e-18!44;UBERON:0001008!4.48e-17!45;UBERON:0002113!2.12e-16!27;UBERON:0003918!2.12e-16!27;UBERON:0005095!2.12e-16!27;UBERON:0007687!2.12e-16!27;UBERON:0000080!2.33e-13!18;UBERON:0002120!2.33e-13!18;UBERON:0004875!2.33e-13!18;UBERON:0005721!2.33e-13!18;UBERON:0005754!2.33e-13!18;UBERON:0007297!2.33e-13!18;UBERON:0000058!6.86e-13!26;UBERON:0006555!1.03e-12!17;UBERON:0005103!1.03e-12!17;UBERON:0000083!1.03e-12!17;UBERON:0009201!1.03e-12!17;UBERON:0004819!1.03e-12!17;UBERON:0006553!1.03e-12!17;UBERON:0003074!1.03e-12!17;UBERON:0003060!1.03e-12!17;UBERON:0005177!1.94e-12!107;UBERON:0002417!1.99e-12!61;UBERON:0000916!1.99e-12!61;UBERON:0003886!5.31e-12!63;UBERON:0004211!6.32e-12!16;UBERON:0001285!6.32e-12!16;UBERON:0007684!6.32e-12!16;UBERON:0003220!6.32e-12!16;UBERON:0004208!6.32e-12!16;UBERON:0004876!2.15e-11!20;UBERON:0009773!4.88e-11!12;UBERON:0001231!4.88e-11!12;UBERON:0004810!4.88e-11!12;UBERON:0002553!7.29e-11!70;UBERON:0003064!1.17e-10!37;UBERON:0003887!1.46e-10!21;UBERON:0000464!3.01e-10!104;UBERON:0005172!1.03e-09!55;UBERON:0005173!1.03e-09!55;UBERON:0001851!2.82e-09!16;UBERON:0001225!6.38e-09!13;UBERON:0008987!6.38e-09!13;UBERON:0000466!1.29e-08!126;UBERON:0009569!1.31e-07!113;UBERON:0003104!2.34e-07!238;UBERON:0009142!2.34e-07!238;UBERON:0000353!3.08e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.33e-27;30!UBERON:0001008;2.33e-27;30!UBERON:0002113;6.02e-23;24!UBERON:0011143;6.02e-23;24!UBERON:0000489;3.93e-22;29!UBERON:0006555;7.01e-20;15!UBERON:0004819;7.01e-20;15!UBERON:0001285;7.01e-20;15!UBERON:0007684;7.01e-20;15!UBERON:0004211;1.16e-17;10!UBERON:0009773;1.16e-17;10!UBERON:0001231;1.16e-17;10!UBERON:0004810;1.16e-17;10!UBERON:0001851;1.20e-15;15!UBERON:0001225;4.73e-15;12!UBERON:0008987;4.73e-15;12!UBERON:0000353;1.22e-13;15!UBERON:0002417;4.42e-09;58!UBERON:0000916;4.42e-09;58!UBERON:0005172;4.45e-09;52!UBERON:0005173;4.45e-09;52!UBERON:0005910;2.49e-08;6!UBERON:0000074;1.88e-07;7!UBERON:0001229;1.88e-07;7!UBERON:0005177;1.97e-07;99!UBERON:0000365;3.20e-07;5!UBERON:0005911;7.18e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.28e-25,26;UBERON:0003918,3.28e-25,26;UBERON:0011143,3.28e-25,26;UBERON:0005095,3.28e-25,26;UBERON:0007687,3.28e-25,26;UBERON:0000489,2.44e-24,31;UBERON:0006555,5.00e-21,16;UBERON:0004819,5.00e-21,16;UBERON:0006554,1.63e-20,47;UBERON:0001008,6.82e-20,48;UBERON:0004211,8.54e-20,15;UBERON:0009773,8.54e-20,15;UBERON:0001231,8.54e-20,15;UBERON:0001285,8.54e-20,15;UBERON:0007684,8.54e-20,15;UBERON:0004208,8.54e-20,15;UBERON:0004810,1.17e-17,10;UBERON:0002417,1.30e-17,60;UBERON:0000916,1.30e-17,60;UBERON:0005177,1.48e-16,101;UBERON:0001851,1.42e-15,15;UBERON:0005172,1.91e-15,54;UBERON:0005173,1.91e-15,54;UBERON:0001225,5.70e-15,12;UBERON:0008987,5.70e-15,12;UBERON:0000353,1.49e-13,15;UBERON:0009569,1.85e-12,112;UBERON:0000080,1.42e-09,9;UBERON:0002120,1.42e-09,9;UBERON:0004875,1.42e-09,9;UBERON:0005721,1.42e-09,9;UBERON:0005754,1.42e-09,9;UBERON:0007297,1.42e-09,9;UBERON:0000058,4.73e-09,19;UBERON:0005103,1.40e-08,8;UBERON:0000083,1.40e-08,8;UBERON:0009201,1.40e-08,8;UBERON:0006553,1.40e-08,8;UBERON:0003074,1.40e-08,8;UBERON:0003060,1.40e-08,8;UBERON:0005910,2.20e-08,6;UBERON:0004876,1.54e-07,11;UBERON:0002100,1.98e-07,199;UBERON:0010532,2.21e-07,7;UBERON:0000074,2.21e-07,7;UBERON:0001229,2.21e-07,7;UBERON:0001230,2.21e-07,7;UBERON:0003220,2.21e-07,7;UBERON:0005749,2.21e-07,7;UBERON:0004199,2.21e-07,7;UBERON:0004209,2.21e-07,7;UBERON:0004198,2.21e-07,7;UBERON:0000365,2.69e-07,5;UBERON:0003103,3.31e-07,68;UBERON:0003887,8.83e-07,12 | |||
|phase1_expression=0,0,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.516833518338658,3.20189636418039,1.67360306382335,0,1.52054421143703,0,0,0.81014194788176,0,0.22452937262617,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587172493218824,0,0,0,0,0,0,0,7.28129089550421,10.7792721272436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843881661206331,0.974370051611986,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0.10366105501537,0,0,0,0,0,0,0,0.591534000199219,0.337169380156203,0.723033089650446,0.441175890929576,0.871517776369625,0.949082476444386,0.134831308160164,0.392442930250692,0.769494313892781,0,0,0.8231480226628,0,0,0,0,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,11.8239177095026,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,3.36106460970222,0,0,0,0,0,0,0,0,1.08524321078289,3.29296134712308,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,8.51847094350807,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17836553734692,1.02341449813341,6.4341568457443,0,0,0,0.0821271560138091,0,0,4.23008073570678,0.200506470303285,0.184161977871793,0,0,0,99.715114452538,33.5786869775248,113.730716530644,102.297457257282,68.2919038936906,1.13733384070897,1.19065593693561,3.02282282542995,7.71136263451447,35.7649297557886,63.2129115057115,30.3302764923596,57.344244616082,103.430136681646,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,1.09814811894422,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,0.30982349809975,1.40847801266121,1.00387946542836,2.94747123039363,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,6.45758059006845,5.05414427002877,1.7737206141467,1.37834040124176,0,0,0,0,0,0,0,0,1.92283328029452,0,0,0,0,0,1.11598390910176,0.59873811429845,0,0,0,0,0,0,32.5824820217087,1.86220955581764,0,0,0,0,0,0,0,0,0,0,55.1729584091006,0,0,1.49712432326576,0,1.21360521749513,6.46371628809375,38.6425159656722,0,0,0,0,0,0,0,0,0,0,0,16.5675265653491,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,1.45802306691627,0.173624994933292,0,0,0,0,0,0.219385397153973,6.75418473817739,0.41827123283581,0.307801034015188,6.26681307158507,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,57.0757021361467,62.1518233787234,66.121705268482,32.6376420285598,0,1.05499032264014,0,0.282706142867882,1.08194319871046,0,0.442287822516696,2.4441205797345,80.9502681298098,82.1700193994244,67.5610013300296,0,0,0,0,0.391329237864179,75.0191372760347,3.94584402849391,0,0,0,21.7968958151014,33.5949740127081,0.664653872707185,2.64793564700399,0.313932918407225,2.38944859545918,27.3225164188601,2.63481878724963,0,0.293977192243133,2.08942095792966,6.46488672495512,15.1347708575023,0,0,0,0,0,0,13.4301086153816,0.794858446811959,0,0.586654148204409,10.0198525314417,0,2.99714414373195,1.15272333723285,15.1188306939009,7.72177490378841,1.1524383839052,18.7621328703803,0,1.22313785466253,0.836822770498666,0.407992870545287,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,3.49487848582361,0,0,0,17.9138016356843,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,3.23103399926713,25.3880206573391,16.368052160508,1.43429871466276,7.67660789277781,0,0,0,0,0,0,26.3406421437472,6.97786426369381,0.511164065356265,4.8724199353654,0,0,0,0,1.71086837884329,0,0,0,0,0,0.988058159489721,0.121792598380896,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0.124192805882767,0,0,6.82421028937415,6.56570267153425,2.11739237728355,0,26.3756272071702,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,1.06336685823198,0.521745061811734,0.150257608997218,0.380805212168795,0.406870733204662,0,0.644463342254931,0,0,0,0,0,0,3.46715694733146,0,29.2313607001037,0.453411851024545,3.24131464053368,11.502625111804,0.895444205407437,0,7.45565768567604,8.48107900540229,4.43702288023104,0,7.17476252046251,1.0362910251936,0,0,0,0,0,14.4148333492422,1.2288645437686,3.16968185037941,0,0.213383459388282,0,0,0,0,0,0,0,2.67352101155024,0,0.169732529954025,0,0.123935764259002,0.558644917973244,0,0.0788617450012534,136.09702720853,0,0,0,0,0,0,0,0,0,0,2.74813611802872,5.78051644403928,0.183428598521679,0.346576998451015,0,6.21323933454091,1.79024599904647,0,13.9176497405429,0,0,0,10.6456382076273,0,0,0,0,0,0,0,0.879356221798103,0.511049710558381,0,0,0,0,0.266107110487916,1.72850981333669,0,0,0,4.49136595359079,0.333694205676207,0,0,14.8544246556308,0,0.431855182437243,1.43325506366115,0,0,13.4840053427025,28.512756657623,0,0.20721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| |||
|short_description=p1@HOXB9 | |||
}} |
Revision as of 16:02, 20 January 2014
Short description: | p1@HOXB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXB9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000442657_5end |
EntrezGene: | HOXB9 |
HGNC: | 5120 |
UniProt: | B3KPJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 8.54e-20 | 15 |
kidney cell | 3.47e-19 | 17 |
kidney epithelial cell | 3.47e-19 | 17 |
kidney tubule cell | 1.17e-17 | 10 |
nephron tubule epithelial cell | 1.17e-17 | 10 |
kidney cortical cell | 5.70e-15 | 12 |
renal cortical epithelial cell | 5.70e-15 | 12 |
epithelial cell | 2.85e-14 | 253 |
glomerular cell | 2.21e-07 | 7 |
kidney corpuscule cell | 2.21e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.18e-22 | 239 |
cancer | 8.80e-22 | 235 |
cell type cancer | 7.72e-18 | 143 |
carcinoma | 2.17e-12 | 106 |
organ system cancer | 2.01e-09 | 137 |
lung cancer | 1.35e-08 | 15 |
respiratory system cancer | 6.55e-08 | 16 |
gastrointestinal system cancer | 9.14e-07 | 14 |