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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000119,UBERON:0000412,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000486,UBERON:0000914,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000926,UBERON:0001003,UBERON:0001048,UBERON:0001062,UBERON:0001992,UBERON:0002050,UBERON:0002067,UBERON:0002073,UBERON:0002097,UBERON:0002199,UBERON:0002329,UBERON:0002384,UBERON:0002416,UBERON:0002532,UBERON:0003059,UBERON:0003077,UBERON:0003102,UBERON:0003104,UBERON:0004016,UBERON:0004120,UBERON:0004121,UBERON:0004290,UBERON:0004923,UBERON:0005086,UBERON:0005291,UBERON:0005423,UBERON:0007376,UBERON:0007383,UBERON:0009142
|DRA_sample_Accession=CAGE@SAMD00004905
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000133,CL:0000134,CL:0000144,CL:0000219,CL:0000220,CL:0000221,CL:0000255,CL:0000333,CL:0000346,CL:0000548,CL:0000723,CL:0002320,CL:0002321,CL:0002371,CL:0002559
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004905
|accession_numbers=CAGE;DRX008297;DRR009169;DRZ000594;DRZ001979;DRZ011944;DRZ013329
|accession_numbers_RNASeq=sRNA-Seq;DRX037099;DRR041465;DRZ007107
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001003,UBERON:0002097,UBERON:0002199,UBERON:0002073,UBERON:0000483,UBERON:0002384,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0004923,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003102,UBERON:0007376,UBERON:0010371,UBERON:0010317,UBERON:0000412,UBERON:0002067,UBERON:0001992,UBERON:0002416
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034,CL:0002559,CL:0000346,CL:1000428
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000072,FF:0000001,FF:0000071
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr7:19157248..19157268,-!p1@TWIST1!2.00!260.51!TWIST1;;chr1:170632285..170632309,+!p1@PRRX1!1.95!98.42!PRRX1;;chr20:55204351..55204377,+!p1@TFAP2C!1.81!79.12!TFAP2C;;chr9:132427883..132427951,+!p2@PRRX2!1.73!52.75!PRRX2;;chr3:147127142..147127168,+!p1@ZIC1!1.68!46.96!ZIC1;;chr3:147127177..147127194,+!p2@ZIC1!1.67!45.67!ZIC1;;chr1:170633348..170633399,+!p2@PRRX1!1.57!48.89!PRRX1;;chr2:114036488..114036504,-!p1@PAX8!1.57!36.02!PAX8;;chr9:132427972..132428056,+!p1@PRRX2!1.53!42.45!PRRX2;;chr11:46299199..46299233,+!p1@CREB3L1!1.50!153.73!CREB3L1;;chr2:119605214..119605230,-!p1@EN1!1.37!22.51!EN1;;chr3:147111231..147111281,+!p3@ZIC1!1.36!21.87!ZIC1;;chr1:170633262..170633285,+!p3@PRRX1!1.35!24.44!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!1.35!21.23!PRRX1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.35!21.23!ZBED1;;chr2:19558373..19558392,-!p1@OSR1!1.33!55.32!OSR1;;chr7:44143925..44143970,+!p1@AEBP1!1.29!396.88!AEBP1;;chr5:72744594..72744609,-!p1@FOXD1!1.28!80.41!FOXD1;;chr6:45296048..45296082,+!p1@RUNX2!1.28!20.58!RUNX2;;chr15:57511609..57511651,+!p2@TCF12!1.26!28.95!TCF12;;chr12:54778471..54778528,-!p1@ZNF385A!1.26!17.37!ZNF385A;;chr1:170632439..170632465,+!p11@PRRX1!1.25!16.72!PRRX1;;chr19:13134772..13134822,+!p2@NFIX!1.22!23.16!NFIX;;chr5:321810..321877,+!p1@AHRR!1.21!47.60!AHRR;;chr4:81118647..81118666,+!p1@PRDM8!1.21!19.94!PRDM8;;chr5:174151553..174151610,+!p1@MSX2!1.17!23.16!MSX2;;chr6:10415276..10415341,-!p2@TFAP2A!1.15!16.08!TFAP2A;;chr14:24837368..24837401,+!p1@NFATC4!1.14!30.23!NFATC4;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.13!13.51!GLIS1;;chr1:170632250..170632277,+!p7@PRRX1!1.12!12.22!PRRX1;;chr3:25470156..25470227,+!p2@RARB!1.12!12.22!RARB;;chr8:116673894..116673913,-!p12@TRPS1!1.12!12.22!TRPS1;;chr6:10412600..10412637,-!p1@TFAP2A!1.08!18.65!TFAP2A;;chr8:93074803..93074845,-!p1@RUNX1T1!1.08!10.94!RUNX1T1;;chrX:136648279..136648295,+!p1@ZIC3!1.08!10.94!ZIC3;;chr2:239756671..239756732,+!p1@TWIST2!1.07!34.74!TWIST2;;chr15:83953397..83953425,-!p1@BNC1!1.07!12.22!BNC1;;chr12:48298765..48298783,-!p2@VDR!1.06!21.87!VDR;;chr11:46299539..46299620,+!p2@CREB3L1!1.06!18.01!CREB3L1;;chr2:176994408..176994492,+!p1@HOXD8!1.05!10.29!HOXD8;;chr5:2751762..2751784,-!p1@IRX2!1.05!10.29!IRX2;;chr7:42276787..42276815,-!p1@GLI3!1.04!27.02!GLI3;;chr7:44143997..44144008,+!p3@AEBP1!1.04!12.86!AEBP1;;chr7:44143978..44143989,+!p2@AEBP1!1.03!18.01!AEBP1;;chr5:72744562..72744573,-!p3@FOXD1!1.03!12.22!FOXD1;;chr5:134369879..134369898,-!p2@PITX1!1.03!9.65!PITX1;;chr1:170633058..170633084,+!p5@PRRX1!1.03!9.65!PRRX1;;chr17:36105042..36105060,-!p1@HNF1B!1.03!9.65!HNF1B;;chr3:147111198..147111225,+!p4@ZIC1!1.03!9.65!ZIC1;;chr10:77161133..77161176,-!p3@ZNF503!1.02!20.58!ZNF503;;chr5:72744445..72744466,-!p2@FOXD1!1.02!16.08!FOXD1;;chr20:39317868..39317884,-!p1@MAFB!1.01!110.64!MAFB;;chr5:134369905..134369972,-!p1@PITX1!1.01!14.15!PITX1;;chr3:157823517..157823562,-!p1@SHOX2!1.00!9.65!SHOX2;;chr1:170632723..170632739,+!p8@PRRX1!1.00!9.01!PRRX1;;chr21:47063625..47063658,+!p1@PCBP3!0.97!37.31!PCBP3;;chr19:45260775..45260838,+!p5@BCL3!0.97!10.94!BCL3;;chr3:147139053..147139112,+!p5@ZIC1!0.97!8.36!ZIC1;;chr11:44331576..44331650,-!p1@ALX4!0.97!8.36!ALX4;;chr11:46333934..46333963,+!p5@CREB3L1!0.97!8.36!CREB3L1;;chr1:170632959..170632987,+!p4@PRRX1!0.96!9.01!PRRX1;;chr19:31840130..31840160,-!p2@TSHZ3!0.94!12.22!TSHZ3;;chr3:147124307..147124336,-!p2@ZIC4!0.94!7.72!ZIC4;;chr5:174151612..174151633,+!p2@MSX2!0.94!7.72!MSX2;;chr1:119530706..119530736,-!p3@TBX15!0.94!7.72!TBX15;;chr8:72756667..72756736,-!p2@MSC!0.92!11.58!MSC;;chr12:53614115..53614154,-!p1@RARG!0.91!39.88!RARG;;chr10:77161650..77161661,-!p4@ZNF503!0.91!10.29!ZNF503;;chr10:28032421..28032494,-!p2@MKX!0.91!7.08!MKX;;chr16:31076332..31076388,-!p3@ZNF668!0.91!7.08!ZNF668;;chr1:170632137..170632172,+!p10@PRRX1!0.91!7.08!PRRX1;;chr1:170632310..170632321,+!p15@PRRX1!0.91!7.08!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.91!7.08!PRRX1;;chr3:25469724..25469773,+!p1@RARB!0.90!10.29!RARB;;chr11:12696071..12696086,+!p3@TEAD1!0.89!9.01!TEAD1;;chr17:46622440..46622477,-!p5@HOXB2!0.89!7.72!HOXB2;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.88!68.83!GLIS2;;chr8:72756063..72756125,-!p1@MSC!0.87!13.51!MSC;;chr12:48298785..48298828,-!p1@VDR!0.86!35.38!VDR;;chr6:10412392..10412409,-!p4@TFAP2A!0.85!7.08!TFAP2A;;chr6:19837592..19837621,+!p1@ID4!0.84!38.59!ID4;;chr14:61116183..61116208,-!p1@SIX1!0.84!23.80!SIX1;;chr5:158526917..158526932,-!p1@EBF1!0.84!15.44!EBF1;;chr17:46622229..46622257,-!p6@HOXB2!0.84!7.08!HOXB2;;chr3:141121847..141121868,+!p5@ZBTB38!0.83!9.01!ZBTB38;;chr2:119604456..119604501,-!p2@EN1!0.83!5.79!EN1;;chr2:177053386..177053402,+!p1@HOXD1!0.83!5.79!HOXD1;;chr3:147111317..147111328,+!p8@ZIC1!0.83!5.79!ZIC1;;chr1:170632115..170632136,+!p9@PRRX1!0.83!5.79!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.83!5.79!PRRX1;;chr12:53625846..53625861,-!p6@RARG!0.83!5.79!RARG;;chrX:136648643..136648711,+!p2@ZIC3!0.83!5.79!ZIC3;;chr7:44143738..44143760,+!p4@AEBP1!0.82!6.43!AEBP1;;chr15:42749722..42749739,-!p2@ZFP106!0.81!10.29!ZFP106;;chr10:77161504..77161530,-!p1@ZNF503!0.80!76.55!ZNF503;;chr7:19157043..19157088,-!p2@TWIST1!0.80!14.15!TWIST1;;chr8:49833948..49833973,-!p2@SNAI2!0.79!35.38!SNAI2;;chr3:24536253..24536328,-!p1@THRB!0.79!10.29!THRB;;chr19:13134457..13134462,+!p5@NFIX!0.79!9.65!NFIX;;chr16:86612320..86612394,+!p1@FOXL1!0.79!5.15!FOXL1;;chr10:28034739..28034756,-!p1@MKX!0.79!5.15!MKX;;chr11:46299443..46299459,+!p4@CREB3L1!0.79!5.15!CREB3L1;;chr2:96012397..96012417,+!p3@KCNIP3!0.79!5.15!KCNIP3;;chr3:138665937..138665968,-!p1@FOXL2!0.79!5.15!FOXL2;;chr1:170632683..170632696,+!p12@PRRX1!0.79!5.15!PRRX1;;chr20:55205825..55205847,+!p2@TFAP2C!0.79!5.15!TFAP2C;;chr10:31607702..31607755,+!p3@ZEB1!0.77!5.79!ZEB1;;chr8:49833978..49833996,-!p1@SNAI2!0.76!109.35!SNAI2;;chr20:48599506..48599526,+!p1@SNAI1!0.76!33.45!SNAI1;;chr19:45254508..45254528,+!p12@BCL3!0.75!5.15!BCL3;;chr11:46332679..46332695,+!p12@CREB3L1!0.74!4.50!CREB3L1;;chr6:100912785..100912822,-!p1@SIM1!0.74!4.50!SIM1;;chr3:147127329..147127341,+!p7@ZIC1!0.74!4.50!ZIC1;;chr17:3571887..3571918,-!p2@TAX1BP3!0.73!54.68!TAX1BP3;;chr4:4861385..4861398,+!p1@MSX1!0.73!14.15!MSX1;;chr2:28616358..28616380,+!p3@FOSL2!0.72!24.44!FOSL2;;chr20:62680984..62680999,-!p1@SOX18!0.72!5.79!SOX18;;chr14:62162285..62162296,+!p3@HIF1A!0.71!23.80!HIF1A;;chr17:46621937..46621966,-!p2@HOXB2!0.71!12.22!HOXB2;;chr7:150946015..150946070,-!p3@SMARCD3!0.71!9.65!SMARCD3;;chr6:1312325..1312340,+!p1@FOXQ1!0.71!7.08!FOXQ1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.70!327.41!TAX1BP3;;chr12:3069037..3069119,+!p2@TEAD4!0.70!15.44!TEAD4;;chr18:51750414..51750449,-!p5@MBD2!0.70!8.36!MBD2;;chr7:137564372..137564394,-!p7@CREB3L2!0.70!7.08!CREB3L2;;chr10:77161533..77161546,-!p2@ZNF503!0.69!17.37!ZNF503;;chr8:99956662..99956684,+!p1@OSR2!0.69!6.43!OSR2;;chr5:3595934..3595957,+!p2@IRX1!0.69!3.86!IRX1;;chr5:3595977..3595999,+!p1@IRX1!0.69!3.86!IRX1;;chr7:35293685..35293718,-!p1@TBX20!0.69!3.86!TBX20;;chr11:128331703..128331717,-!p8@ETS1!0.69!3.86!ETS1;;chr11:44331679..44331702,-!p2@ALX4!0.69!3.86!ALX4;;chr2:96012353..96012378,+!p4@KCNIP3!0.69!3.86!KCNIP3;;chr3:147121835..147121852,-!p9@ZIC4!0.69!3.86!ZIC4;;chr3:21792682..21792720,-!p1@ZNF385D!0.69!3.86!ZNF385D;;chr4:109089095..109089144,-!p6@LEF1!0.69!3.86!LEF1;;chr16:49698228..49698243,-!p2@ZNF423!0.69!3.86!ZNF423;;chr1:119530493..119530572,-!p1@TBX15!0.69!3.86!TBX15;;chr1:170633245..170633256,+!p14@PRRX1!0.69!3.86!PRRX1;;chr2:60780607..60780624,-!p2@BCL11A!0.68!12.86!BCL11A;;chr14:62203595..62203676,+!p4@HIF1A!0.68!7.72!HIF1A;;chr2:28616337..28616355,+!p2@FOSL2!0.67!76.55!FOSL2;;chr11:65687362..65687436,+!p3@DRAP1!0.67!19.30!DRAP1;;chr12:53625966..53626012,-!p2@RARG!0.67!10.94!RARG;;chr19:13136241..13136258,+!p7@NFIX!0.67!5.15!NFIX;;chr5:72743793..72743855,-!p4@FOXD1!0.67!4.50!FOXD1;;chr8:116681409..116681431,-!p2@TRPS1!0.66!10.94!TRPS1;;chr4:81104985..81105005,+!p4@PRDM8!0.66!4.50!PRDM8;;chr7:137563905..137563916,-!p11@CREB3L2!0.65!5.15!CREB3L2;;chr8:48650715..48650735,-!p1@CEBPD!0.64!504.30!CEBPD;;chr2:191878874..191878938,-!p1@STAT1!0.64!213.56!STAT1;;chr12:53856284..53856299,+!p3@PCBP2!0.64!10.94!PCBP2;;chr17:46622070..46622109,-!p1@HOXB2!0.64!8.36!HOXB2;;chr11:65687222..65687240,+!p7@DRAP1!0.64!4.50!DRAP1;;chr8:72756213..72756243,-!p5@MSC!0.64!4.50!MSC;;chr2:28615716..28615733,+!p1@FOSL2!0.63!186.54!FOSL2;;chr22:41697497..41697515,+!p2@ZC3H7B!0.63!10.29!ZC3H7B;;chr11:615570..615721,-!p2@IRF7!0.63!7.08!IRF7;;chr11:63684602..63684664,-!p1@RCOR2!0.63!7.08!RCOR2;;chr8:72756267..72756296,-!p4@MSC!0.63!5.15!MSC;;chr1:23885981..23886002,-!p1@ID3!0.62!661.25!ID3;;chr14:62162258..62162269,+!p2@HIF1A!0.62!36.02!HIF1A;;chr2:46602901..46602926,+!p7@EPAS1!0.62!4.50!EPAS1;;chr2:176987441..176987454,+!p1@HOXD9!0.62!3.22!HOXD9;;chr2:19558327..19558334,-!p2@OSR1!0.62!3.22!OSR1;;chr2:223163706..223163730,-!p1@PAX3!0.62!3.22!PAX3;;chr3:181429704..181429722,+!p1@SOX2!0.62!3.22!SOX2;;chr3:181429741..181429767,+!p2@SOX2!0.62!3.22!SOX2;;chr10:119303078..119303169,+!p2@EMX2!0.62!3.22!EMX2;;chrX:136648297..136648319,+!p3@ZIC3!0.62!3.22!ZIC3;;chr15:57511589..57511608,+!p4@TCF12!0.62!3.22!TCF12;;chr1:170632051..170632081,+!p16@PRRX1!0.62!3.22!PRRX1;;chr1:170633021..170633028,+!p27@PRRX1!0.62!3.22!PRRX1;;chr6:100912752..100912778,-!p2@SIM1!0.62!3.22!SIM1;;chr6:10412576..10412599,-!p5@TFAP2A!0.62!3.22!TFAP2A;;chr8:72756380..72756427,-!p8@MSC!0.62!3.22!MSC;;chr17:1958388..1958404,+!p1@HIC1!0.61!23.16!HIC1;;chr7:137563945..137564001,-!p6@CREB3L2!0.61!8.36!CREB3L2;;chr2:239756739..239756755,+!p2@TWIST2!0.61!5.79!TWIST2;;chr11:64764435..64764449,-!p1@BATF2!0.61!4.50!BATF2;;chr11:65687158..65687216,+!p4@DRAP1!0.60!20.58!DRAP1;;chr8:145159846..145159889,+!p6@MAF1!0.60!4.50!MAF1;;chr6:43140095..43140145,+!p5@SRF!0.60!3.86!SRF;;chr6:43140149..43140177,+!p8@SRF!0.60!3.22!SRF;;chr12:56753869..56753930,-!p1@STAT2!0.59!155.66!STAT2;;chr10:63853436..63853442,+!p4@ARID5B!0.59!18.65!ARID5B;;chr12:57919293..57919311,+!p3@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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000346;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002559;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001003;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002067;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002097;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002416
|ffid_belonging_in_development=CL:0000133,CL:0000134,CL:0000221
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 34: Line 44:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor2.CNhs11979.11348-117G7.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor2.CNhs11979.11348-117G7.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor2.CNhs11979.11348-117G7.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor2.CNhs11979.11348-117G7.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor2.CNhs11979.11348-117G7.hg38.nobarcode.ctss.bed.gz
|id=FF:11348-117G7
|id=FF:11348-117G7
|is_a=EFO:0002091;;FF:0000002;;FF:0000071;;FF:0000210
|is_a=EFO:0002091;;FF:0000071
|is_obsolete=
|library_id=CNhs11979
|library_id_phase_based=2:CNhs11979
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11348
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10007.AGTTCC.11348
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11348
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10007.AGTTCC.11348
|name=Hair Follicle Dermal Papilla Cells, donor2
|name=Hair Follicle Dermal Papilla Cells, donor2
|namespace=FANTOM5
|namespace=FANTOM5
Line 41: Line 65:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11979,LSID836,release011,COMPLETED
|profile_hcage=CNhs11979,LSID836,release011,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=SRhi10007,,,
|profile_srnaseq=SRhi10007,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=117
|rna_box=117
|rna_catalog_number=CA602-R10a
|rna_catalog_number=CA602-R10a
Line 55: Line 82:
|rna_tube_id=117G7
|rna_tube_id=117G7
|rna_weight_ug=10
|rna_weight_ug=10
|rnaseq_library_id=SRhi10007.AGTTCC
|sample_age=51
|sample_age=51
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_line=
Line 68: Line 97:
|sample_ethnicity=C
|sample_ethnicity=C
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.41332696193106e-226!GO:0005737;cytoplasm;4.91176402454527e-180!GO:0043231;intracellular membrane-bound organelle;2.84513459817588e-140!GO:0043227;membrane-bound organelle;5.53027077944652e-140!GO:0043226;organelle;7.42349187117442e-140!GO:0043229;intracellular organelle;1.32264285414542e-139!GO:0044444;cytoplasmic part;1.73925732428876e-129!GO:0044422;organelle part;2.16474832555272e-114!GO:0044446;intracellular organelle part;4.65733971022205e-113!GO:0032991;macromolecular complex;2.98045422862316e-76!GO:0005515;protein binding;7.54628525017141e-74!GO:0030529;ribonucleoprotein complex;3.06316521238221e-66!GO:0044238;primary metabolic process;1.5645873627573e-63!GO:0044237;cellular metabolic process;3.08939446477117e-62!GO:0005739;mitochondrion;8.21600080884177e-59!GO:0043170;macromolecule metabolic process;8.6809225964398e-57!GO:0043233;organelle lumen;9.76785243440038e-57!GO:0031974;membrane-enclosed lumen;9.76785243440038e-57!GO:0031090;organelle membrane;5.54372193307684e-52!GO:0003723;RNA binding;8.18587257320134e-52!GO:0044428;nuclear part;1.2646432215339e-49!GO:0019538;protein metabolic process;1.04770197880679e-46!GO:0016043;cellular component organization and biogenesis;1.00120349538365e-42!GO:0005840;ribosome;3.77159404294149e-42!GO:0044260;cellular macromolecule metabolic process;2.7154980709768e-41!GO:0044267;cellular protein metabolic process;1.9409874587685e-40!GO:0006412;translation;5.78705400255388e-40!GO:0005634;nucleus;5.82229417220928e-40!GO:0044429;mitochondrial part;6.18273399934659e-40!GO:0043234;protein complex;1.96932740992751e-38!GO:0015031;protein transport;3.43592852642288e-38!GO:0009058;biosynthetic process;1.71840353584276e-37!GO:0003735;structural constituent of ribosome;1.97879558807734e-37!GO:0033036;macromolecule localization;2.00655715844542e-37!GO:0045184;establishment of protein localization;1.07711538446105e-35!GO:0008104;protein localization;4.40794834887367e-35!GO:0031967;organelle envelope;6.16418776544037e-35!GO:0031975;envelope;8.10193690069253e-35!GO:0005829;cytosol;2.96999929264444e-34!GO:0009059;macromolecule biosynthetic process;4.27229971065522e-34!GO:0006396;RNA processing;7.85648476368071e-34!GO:0044249;cellular biosynthetic process;1.0623696569823e-33!GO:0033279;ribosomal subunit;1.99392135361715e-32!GO:0031981;nuclear lumen;5.31506256128344e-32!GO:0046907;intracellular transport;3.66019953562465e-30!GO:0016071;mRNA metabolic process;6.68888152934782e-28!GO:0005740;mitochondrial envelope;7.41197022649872e-28!GO:0031966;mitochondrial membrane;1.69690284017495e-26!GO:0065003;macromolecular complex assembly;2.32110620498929e-26!GO:0008380;RNA splicing;1.04108353088339e-25!GO:0006886;intracellular protein transport;4.82797752968998e-25!GO:0043283;biopolymer metabolic process;5.6833042569354e-25!GO:0019866;organelle inner membrane;6.87805635632697e-25!GO:0006996;organelle organization and biogenesis;1.27731841347056e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.73784492477196e-24!GO:0005743;mitochondrial inner membrane;1.2135545993451e-23!GO:0022607;cellular component assembly;1.49776960856504e-23!GO:0006397;mRNA processing;1.71739629040982e-23!GO:0005783;endoplasmic reticulum;2.95416079734059e-22!GO:0010467;gene expression;3.2652805392862e-22!GO:0012505;endomembrane system;1.98816747970229e-21!GO:0006119;oxidative phosphorylation;8.53920375226567e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.98225888866176e-20!GO:0043228;non-membrane-bound organelle;1.27104723682912e-19!GO:0043232;intracellular non-membrane-bound organelle;1.27104723682912e-19!GO:0005654;nucleoplasm;1.34193506635587e-19!GO:0048770;pigment granule;2.23439164937165e-19!GO:0042470;melanosome;2.23439164937165e-19!GO:0005794;Golgi apparatus;2.44114487195695e-19!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.49242477602211e-19!GO:0044455;mitochondrial membrane part;3.58434436019102e-19!GO:0051649;establishment of cellular localization;1.21113814943572e-18!GO:0051641;cellular localization;1.56886610514333e-18!GO:0044445;cytosolic part;1.84208690962148e-18!GO:0044432;endoplasmic reticulum part;4.78867882654713e-18!GO:0015934;large ribosomal subunit;8.66861325593e-18!GO:0005681;spliceosome;1.24657740819096e-17!GO:0008134;transcription factor binding;5.4265263161291e-17!GO:0016462;pyrophosphatase activity;6.09505258414322e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.88242824998641e-17!GO:0006457;protein folding;7.50080511227323e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;8.74175868733368e-17!GO:0000166;nucleotide binding;1.37690614405538e-16!GO:0017111;nucleoside-triphosphatase activity;2.89145688405996e-16!GO:0044451;nucleoplasm part;3.36469661610686e-16!GO:0005746;mitochondrial respiratory chain;6.12629159485529e-16!GO:0015935;small ribosomal subunit;1.12053050924762e-15!GO:0031980;mitochondrial lumen;2.9266766240911e-15!GO:0005759;mitochondrial matrix;2.9266766240911e-15!GO:0000502;proteasome complex (sensu Eukaryota);4.70318934863578e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.13380743141699e-15!GO:0051186;cofactor metabolic process;7.72107449562348e-15!GO:0043285;biopolymer catabolic process;1.62473294787137e-14!GO:0050136;NADH dehydrogenase (quinone) activity;3.8739345708679e-14!GO:0003954;NADH dehydrogenase activity;3.8739345708679e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.8739345708679e-14!GO:0044265;cellular macromolecule catabolic process;1.07118417307136e-13!GO:0009057;macromolecule catabolic process;1.64102516811958e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;2.11834648652034e-13!GO:0048193;Golgi vesicle transport;2.38920839318331e-13!GO:0006259;DNA metabolic process;2.44405859767105e-13!GO:0019941;modification-dependent protein catabolic process;3.60737023155319e-13!GO:0043632;modification-dependent macromolecule catabolic process;3.60737023155319e-13!GO:0030163;protein catabolic process;3.71620111080425e-13!GO:0006605;protein targeting;3.87049886194228e-13!GO:0044257;cellular protein catabolic process;4.52756165137434e-13!GO:0022618;protein-RNA complex assembly;4.52756165137434e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.5784816850366e-13!GO:0016874;ligase activity;4.86063660406048e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.22499062138425e-13!GO:0008135;translation factor activity, nucleic acid binding;5.49021645717479e-13!GO:0006512;ubiquitin cycle;5.99129042762134e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.0600201322876e-13!GO:0016192;vesicle-mediated transport;7.27428785003965e-13!GO:0006511;ubiquitin-dependent protein catabolic process;7.69425576207258e-13!GO:0051082;unfolded protein binding;1.88491474792833e-12!GO:0005789;endoplasmic reticulum membrane;1.90887152275565e-12!GO:0005730;nucleolus;2.21441040861304e-12!GO:0005793;ER-Golgi intermediate compartment;2.8384391722599e-12!GO:0030964;NADH dehydrogenase complex (quinone);3.15381059317529e-12!GO:0045271;respiratory chain complex I;3.15381059317529e-12!GO:0005747;mitochondrial respiratory chain complex I;3.15381059317529e-12!GO:0044248;cellular catabolic process;3.4499031758565e-12!GO:0042775;organelle ATP synthesis coupled electron transport;4.35200631173203e-12!GO:0042773;ATP synthesis coupled electron transport;4.35200631173203e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.69245543750597e-12!GO:0017076;purine nucleotide binding;9.75081341140311e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.02795286708553e-11!GO:0032553;ribonucleotide binding;1.4938814553089e-11!GO:0032555;purine ribonucleotide binding;1.4938814553089e-11!GO:0012501;programmed cell death;1.55681052441338e-11!GO:0005761;mitochondrial ribosome;1.99417471588179e-11!GO:0000313;organellar ribosome;1.99417471588179e-11!GO:0006732;coenzyme metabolic process;2.71847433323337e-11!GO:0003712;transcription cofactor activity;3.61850593819703e-11!GO:0006915;apoptosis;4.478631168827e-11!GO:0043412;biopolymer modification;1.3521028481578e-10!GO:0008219;cell death;2.1213917003186e-10!GO:0016265;death;2.1213917003186e-10!GO:0003743;translation initiation factor activity;5.13610867466945e-10!GO:0006464;protein modification process;8.93914265717024e-10!GO:0007049;cell cycle;1.16714256076502e-09!GO:0016491;oxidoreductase activity;1.32339724720357e-09!GO:0009055;electron carrier activity;1.51064608845814e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.87957382786555e-09!GO:0000375;RNA splicing, via transesterification reactions;1.87957382786555e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.87957382786555e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.35030774140826e-09!GO:0009259;ribonucleotide metabolic process;2.59002949968612e-09!GO:0003676;nucleic acid binding;2.77948915353495e-09!GO:0003924;GTPase activity;5.28939826440514e-09!GO:0009150;purine ribonucleotide metabolic process;6.65980483434235e-09!GO:0006446;regulation of translational initiation;6.86748584993305e-09!GO:0008639;small protein conjugating enzyme activity;7.02658023160876e-09!GO:0048523;negative regulation of cellular process;7.74997467763526e-09!GO:0044431;Golgi apparatus part;7.75286737960888e-09!GO:0006163;purine nucleotide metabolic process;9.39676751979193e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.13589902527493e-08!GO:0004842;ubiquitin-protein ligase activity;1.175961770654e-08!GO:0006413;translational initiation;1.3160173870634e-08!GO:0005524;ATP binding;1.37271582978531e-08!GO:0030554;adenyl nucleotide binding;1.74456832406822e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.74900435069176e-08!GO:0019787;small conjugating protein ligase activity;1.86912028567631e-08!GO:0009260;ribonucleotide biosynthetic process;1.92200803207666e-08!GO:0032559;adenyl ribonucleotide binding;2.03762501997172e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.14606374838947e-08!GO:0006461;protein complex assembly;2.38491622382092e-08!GO:0006164;purine nucleotide biosynthetic process;2.66865556260913e-08!GO:0005635;nuclear envelope;3.19069592490301e-08!GO:0009199;ribonucleoside triphosphate metabolic process;3.33692507213784e-08!GO:0016604;nuclear body;3.61394459384502e-08!GO:0005788;endoplasmic reticulum lumen;3.67977867781987e-08!GO:0009141;nucleoside triphosphate metabolic process;3.87214818694818e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.43903940354766e-08!GO:0009144;purine nucleoside triphosphate metabolic process;4.43903940354766e-08!GO:0015986;ATP synthesis coupled proton transport;4.7298203195659e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.7298203195659e-08!GO:0043687;post-translational protein modification;4.74463168118057e-08!GO:0008565;protein transporter activity;4.77059219237973e-08!GO:0042254;ribosome biogenesis and assembly;4.77059219237973e-08!GO:0006913;nucleocytoplasmic transport;4.78379263372637e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.41946375675679e-08!GO:0030120;vesicle coat;5.54010230831252e-08!GO:0030662;coated vesicle membrane;5.54010230831252e-08!GO:0009056;catabolic process;6.24804157304565e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;7.4844886836325e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;8.00887892114606e-08!GO:0009060;aerobic respiration;8.21529789844832e-08!GO:0045333;cellular respiration;9.41554064294514e-08!GO:0051169;nuclear transport;9.94934619949049e-08!GO:0048475;coated membrane;1.05002087507618e-07!GO:0030117;membrane coat;1.05002087507618e-07!GO:0008361;regulation of cell size;1.1554420570404e-07!GO:0042623;ATPase activity, coupled;1.18028013515614e-07!GO:0048519;negative regulation of biological process;1.18910229264244e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.27565757867238e-07!GO:0016049;cell growth;1.48985873831388e-07!GO:0046034;ATP metabolic process;1.56569106063318e-07!GO:0031965;nuclear membrane;1.59649377663841e-07!GO:0019829;cation-transporting ATPase activity;1.78011478988406e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.83432620662233e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.83432620662233e-07!GO:0022402;cell cycle process;1.9276039176384e-07!GO:0006366;transcription from RNA polymerase II promoter;2.02819270738553e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.02819270738553e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.1738916421687e-07!GO:0016070;RNA metabolic process;2.20207847198623e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.41837705660595e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.41837705660595e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.49321973799244e-07!GO:0016881;acid-amino acid ligase activity;2.93278356968008e-07!GO:0006323;DNA packaging;3.03685501262351e-07!GO:0016887;ATPase activity;3.15791037814101e-07!GO:0065004;protein-DNA complex assembly;3.30746019515767e-07!GO:0005768;endosome;3.33962693981204e-07!GO:0017038;protein import;3.52415745577967e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.56392244835832e-07!GO:0051188;cofactor biosynthetic process;3.80707329441319e-07!GO:0051246;regulation of protein metabolic process;4.48224311317223e-07!GO:0000139;Golgi membrane;4.63996615840153e-07!GO:0007005;mitochondrion organization and biogenesis;5.79924816710597e-07!GO:0005773;vacuole;6.7275043794422e-07!GO:0006399;tRNA metabolic process;7.08681859013713e-07!GO:0006754;ATP biosynthetic process;7.61791664733896e-07!GO:0006753;nucleoside phosphate metabolic process;7.61791664733896e-07!GO:0001558;regulation of cell growth;7.63968134832899e-07!GO:0016607;nuclear speck;8.38773738496341e-07!GO:0016469;proton-transporting two-sector ATPase complex;8.50505869823149e-07!GO:0051276;chromosome organization and biogenesis;8.52356082033183e-07!GO:0009117;nucleotide metabolic process;1.26580420274923e-06!GO:0042981;regulation of apoptosis;1.37702608754304e-06!GO:0043067;regulation of programmed cell death;1.38768680789078e-06!GO:0044453;nuclear membrane part;1.52900484479733e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.60912504032124e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.60912504032124e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.60912504032124e-06!GO:0031252;leading edge;1.81708506458619e-06!GO:0016787;hydrolase activity;2.09945857332606e-06!GO:0004298;threonine endopeptidase activity;2.20693349797483e-06!GO:0000074;regulation of progression through cell cycle;2.26167179813781e-06!GO:0000278;mitotic cell cycle;2.28308254014317e-06!GO:0051726;regulation of cell cycle;2.72614848085271e-06!GO:0043038;amino acid activation;3.41841171261101e-06!GO:0006418;tRNA aminoacylation for protein translation;3.41841171261101e-06!GO:0043039;tRNA aminoacylation;3.41841171261101e-06!GO:0016023;cytoplasmic membrane-bound vesicle;3.61340039773721e-06!GO:0005798;Golgi-associated vesicle;3.68135925251854e-06!GO:0051187;cofactor catabolic process;3.8905096271447e-06!GO:0006091;generation of precursor metabolites and energy;4.03599152134561e-06!GO:0003714;transcription corepressor activity;4.26262553085472e-06!GO:0006099;tricarboxylic acid cycle;4.36716748540934e-06!GO:0046356;acetyl-CoA catabolic process;4.36716748540934e-06!GO:0006333;chromatin assembly or disassembly;4.62620481978681e-06!GO:0031988;membrane-bound vesicle;4.89473761209548e-06!GO:0045259;proton-transporting ATP synthase complex;5.13063682889338e-06!GO:0030532;small nuclear ribonucleoprotein complex;5.28003624775619e-06!GO:0006974;response to DNA damage stimulus;5.32659644417941e-06!GO:0044440;endosomal part;6.11001938675292e-06!GO:0010008;endosome membrane;6.11001938675292e-06!GO:0043069;negative regulation of programmed cell death;6.29758407614045e-06!GO:0005525;GTP binding;6.34838123996436e-06!GO:0000323;lytic vacuole;7.06672182746154e-06!GO:0005764;lysosome;7.06672182746154e-06!GO:0043066;negative regulation of apoptosis;8.9654316036779e-06!GO:0006084;acetyl-CoA metabolic process;1.00132637594509e-05!GO:0008026;ATP-dependent helicase activity;1.10725527136908e-05!GO:0004386;helicase activity;1.15233563110797e-05!GO:0006752;group transfer coenzyme metabolic process;1.2082315463385e-05!GO:0009109;coenzyme catabolic process;1.22239779051885e-05!GO:0030133;transport vesicle;1.31336993448571e-05!GO:0051789;response to protein stimulus;1.31754553528042e-05!GO:0006986;response to unfolded protein;1.31754553528042e-05!GO:0006916;anti-apoptosis;1.38651085698755e-05!GO:0016564;transcription repressor activity;1.40967766366551e-05!GO:0032446;protein modification by small protein conjugation;1.40967766366551e-05!GO:0003713;transcription coactivator activity;1.46807213930537e-05!GO:0000151;ubiquitin ligase complex;1.65039142679213e-05!GO:0009108;coenzyme biosynthetic process;1.65203746663209e-05!GO:0016567;protein ubiquitination;1.72246306284123e-05!GO:0045786;negative regulation of progression through cell cycle;1.75725777178296e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.83244161555516e-05!GO:0005667;transcription factor complex;1.87976702741071e-05!GO:0050794;regulation of cellular process;2.36300240205265e-05!GO:0006793;phosphorus metabolic process;2.36346891992938e-05!GO:0006796;phosphate metabolic process;2.36346891992938e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.58209220756792e-05!GO:0006334;nucleosome assembly;2.88747814227398e-05!GO:0007243;protein kinase cascade;3.50021158746512e-05!GO:0031410;cytoplasmic vesicle;3.68397954255988e-05!GO:0005762;mitochondrial large ribosomal subunit;3.78399294787493e-05!GO:0000315;organellar large ribosomal subunit;3.78399294787493e-05!GO:0031982;vesicle;3.9093183093969e-05!GO:0016563;transcription activator activity;4.37650187284487e-05!GO:0015980;energy derivation by oxidation of organic compounds;4.4477515535023e-05!GO:0048522;positive regulation of cellular process;4.67218431371482e-05!GO:0031324;negative regulation of cellular metabolic process;4.7889642733183e-05!GO:0006364;rRNA processing;4.80080959462123e-05!GO:0065002;intracellular protein transport across a membrane;4.87523653458183e-05!GO:0006613;cotranslational protein targeting to membrane;5.27552078354272e-05!GO:0019867;outer membrane;5.27552078354272e-05!GO:0051170;nuclear import;5.57325949997442e-05!GO:0016740;transferase activity;5.93672704416193e-05!GO:0003697;single-stranded DNA binding;6.05008586834056e-05!GO:0031497;chromatin assembly;6.05008586834056e-05!GO:0005770;late endosome;6.33690967202764e-05!GO:0016072;rRNA metabolic process;6.41336343743259e-05!GO:0031968;organelle outer membrane;6.42336374409256e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.67693709668082e-05!GO:0006606;protein import into nucleus;7.97199566508898e-05!GO:0030867;rough endoplasmic reticulum membrane;8.02045856838506e-05!GO:0032561;guanyl ribonucleotide binding;8.42208054855074e-05!GO:0019001;guanyl nucleotide binding;8.42208054855074e-05!GO:0016853;isomerase activity;9.7781142635567e-05!GO:0016310;phosphorylation;0.000102686700830192!GO:0005905;coated pit;0.000106057611972336!GO:0005643;nuclear pore;0.000107947159114298!GO:0033116;ER-Golgi intermediate compartment membrane;0.000111228381255173!GO:0000785;chromatin;0.000113472827691199!GO:0040008;regulation of growth;0.000120815554532399!GO:0045454;cell redox homeostasis;0.000134863756173098!GO:0030029;actin filament-based process;0.000181335156304987!GO:0006281;DNA repair;0.000210948816231303!GO:0044262;cellular carbohydrate metabolic process;0.000210948816231303!GO:0016568;chromatin modification;0.000225683471286541!GO:0009892;negative regulation of metabolic process;0.000226195328714195!GO:0016126;sterol biosynthetic process;0.00022826582434157!GO:0000245;spliceosome assembly;0.000228765852614423!GO:0005694;chromosome;0.000246588615045252!GO:0009719;response to endogenous stimulus;0.000254069911824659!GO:0005741;mitochondrial outer membrane;0.000266100083618812!GO:0046930;pore complex;0.000271345088836767!GO:0019899;enzyme binding;0.000302990133585919!GO:0003724;RNA helicase activity;0.000305410669666647!GO:0006612;protein targeting to membrane;0.00031319876319601!GO:0015630;microtubule cytoskeleton;0.000318210385307952!GO:0043021;ribonucleoprotein binding;0.000353662243154536!GO:0043566;structure-specific DNA binding;0.000359968345420442!GO:0007010;cytoskeleton organization and biogenesis;0.00038143987167165!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000387652592141156!GO:0016779;nucleotidyltransferase activity;0.000421304647468175!GO:0005791;rough endoplasmic reticulum;0.00042695845639255!GO:0016044;membrane organization and biogenesis;0.000435375176462086!GO:0005885;Arp2/3 protein complex;0.000435736149139306!GO:0008250;oligosaccharyl transferase complex;0.000467376360603942!GO:0009165;nucleotide biosynthetic process;0.000480544238489005!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00049802984022666!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000530005174711578!GO:0015399;primary active transmembrane transporter activity;0.000530005174711578!GO:0051427;hormone receptor binding;0.000556725469314166!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000566705048376707!GO:0005048;signal sequence binding;0.000587048836754275!GO:0009967;positive regulation of signal transduction;0.000663383338403196!GO:0043623;cellular protein complex assembly;0.000761550138161437!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000797258666004448!GO:0016859;cis-trans isomerase activity;0.00088524644834885!GO:0048518;positive regulation of biological process;0.000897438899606558!GO:0005769;early endosome;0.000919316537561544!GO:0022403;cell cycle phase;0.000924987895344346!GO:0030663;COPI coated vesicle membrane;0.000940516162309327!GO:0030126;COPI vesicle coat;0.000940516162309327!GO:0044427;chromosomal part;0.000944371271151992!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000973114461873663!GO:0050789;regulation of biological process;0.000993546492788022!GO:0008654;phospholipid biosynthetic process;0.00103006098134732!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00106000602539615!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00109449646435182!GO:0035257;nuclear hormone receptor binding;0.00111412009669776!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00124872060445799!GO:0030658;transport vesicle membrane;0.00124872060445799!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00126809165319145!GO:0051329;interphase of mitotic cell cycle;0.00126809165319145!GO:0004576;oligosaccharyl transferase activity;0.00126809165319145!GO:0051920;peroxiredoxin activity;0.00126809165319145!GO:0006403;RNA localization;0.00134849924621908!GO:0004177;aminopeptidase activity;0.00136522096262086!GO:0050657;nucleic acid transport;0.00144012130790889!GO:0051236;establishment of RNA localization;0.00144012130790889!GO:0050658;RNA transport;0.00144012130790889!GO:0030176;integral to endoplasmic reticulum membrane;0.00148487755097901!GO:0044420;extracellular matrix part;0.00158664581452464!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00158887621448692!GO:0048468;cell development;0.00167488750895395!GO:0018196;peptidyl-asparagine modification;0.00170143316116111!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00170143316116111!GO:0043284;biopolymer biosynthetic process;0.00170230798800906!GO:0007264;small GTPase mediated signal transduction;0.00175782542431749!GO:0019843;rRNA binding;0.00175791128779964!GO:0016481;negative regulation of transcription;0.00177639936080689!GO:0030118;clathrin coat;0.00183258466498052!GO:0016363;nuclear matrix;0.00188685412981102!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00190792886017405!GO:0045792;negative regulation of cell size;0.0019374236337117!GO:0030308;negative regulation of cell growth;0.00210639062431026!GO:0030137;COPI-coated vesicle;0.00211015672259866!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00213823440559215!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00213823440559215!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00213823440559215!GO:0006839;mitochondrial transport;0.00224355758019391!GO:0051325;interphase;0.00228290885537308!GO:0000087;M phase of mitotic cell cycle;0.00237673674039439!GO:0006260;DNA replication;0.00241064353563601!GO:0043492;ATPase activity, coupled to movement of substances;0.00263549552733054!GO:0007067;mitosis;0.00269501305306704!GO:0007050;cell cycle arrest;0.00275616706598881!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00277483014248999!GO:0030132;clathrin coat of coated pit;0.00284690667951793!GO:0030660;Golgi-associated vesicle membrane;0.00286836944593069!GO:0006414;translational elongation;0.0030241020744609!GO:0015992;proton transport;0.00314239130224494!GO:0006979;response to oxidative stress;0.00317335499954162!GO:0006818;hydrogen transport;0.00324921645847293!GO:0008186;RNA-dependent ATPase activity;0.00330797183926257!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00330797183926257!GO:0043488;regulation of mRNA stability;0.00351804756514436!GO:0043487;regulation of RNA stability;0.00351804756514436!GO:0042802;identical protein binding;0.0035756235568465!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00360699275489686!GO:0000314;organellar small ribosomal subunit;0.00374246971872743!GO:0005763;mitochondrial small ribosomal subunit;0.00374246971872743!GO:0030127;COPII vesicle coat;0.00391004124568065!GO:0012507;ER to Golgi transport vesicle membrane;0.00391004124568065!GO:0030027;lamellipodium;0.00392848650040872!GO:0001726;ruffle;0.00400750734322986!GO:0008092;cytoskeletal protein binding;0.00401202328212833!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00402959413189171!GO:0008047;enzyme activator activity;0.00436916323208329!GO:0005581;collagen;0.00446680535280585!GO:0043681;protein import into mitochondrion;0.00457614620283768!GO:0030134;ER to Golgi transport vesicle;0.00460619262961203!GO:0006509;membrane protein ectodomain proteolysis;0.0046989162835678!GO:0033619;membrane protein proteolysis;0.0046989162835678!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00477597211308642!GO:0006626;protein targeting to mitochondrion;0.00483552351524501!GO:0051252;regulation of RNA metabolic process;0.00490762855918465!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00502038660697967!GO:0003729;mRNA binding;0.00509902164433308!GO:0051301;cell division;0.00515438257220462!GO:0048500;signal recognition particle;0.00528729071896448!GO:0006695;cholesterol biosynthetic process;0.00532143744206269!GO:0048471;perinuclear region of cytoplasm;0.00532143744206269!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00552110629425736!GO:0065009;regulation of a molecular function;0.0057018351790574!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0058707054891983!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0058707054891983!GO:0006891;intra-Golgi vesicle-mediated transport;0.00600934129269302!GO:0017166;vinculin binding;0.00620203765880725!GO:0005774;vacuolar membrane;0.00639804046759624!GO:0051128;regulation of cellular component organization and biogenesis;0.00650193687823785!GO:0005813;centrosome;0.0065459345151914!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00657773054961769!GO:0008610;lipid biosynthetic process;0.00691825250893438!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00717494109873845!GO:0046474;glycerophospholipid biosynthetic process;0.00750307138565752!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00750307138565752!GO:0000902;cell morphogenesis;0.00768072935684541!GO:0032989;cellular structure morphogenesis;0.00768072935684541!GO:0046483;heterocycle metabolic process;0.0078796363077445!GO:0005869;dynactin complex;0.00793789136265102!GO:0007006;mitochondrial membrane organization and biogenesis;0.00798617115310623!GO:0004004;ATP-dependent RNA helicase activity;0.00798617115310623!GO:0050662;coenzyme binding;0.00808944787502725!GO:0030119;AP-type membrane coat adaptor complex;0.00812341114756661!GO:0030659;cytoplasmic vesicle membrane;0.00826154712559485!GO:0006740;NADPH regeneration;0.00843955846785357!GO:0006098;pentose-phosphate shunt;0.00843955846785357!GO:0051287;NAD binding;0.00848538574441611!GO:0031418;L-ascorbic acid binding;0.00859340873655589!GO:0006289;nucleotide-excision repair;0.00883724303947462!GO:0031543;peptidyl-proline dioxygenase activity;0.00884459255903204!GO:0019798;procollagen-proline dioxygenase activity;0.00890631937793372!GO:0006402;mRNA catabolic process;0.00895987470648994!GO:0007160;cell-matrix adhesion;0.00895987470648994!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00901836620499477!GO:0022890;inorganic cation transmembrane transporter activity;0.00904694974527259!GO:0031589;cell-substrate adhesion;0.0094748928913913!GO:0031902;late endosome membrane;0.00964791302322677!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00974987570170827!GO:0015002;heme-copper terminal oxidase activity;0.00974987570170827!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00974987570170827!GO:0004129;cytochrome-c oxidase activity;0.00974987570170827!GO:0051168;nuclear export;0.0100115244625254!GO:0048487;beta-tubulin binding;0.01004239140396!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0101043693253736!GO:0008154;actin polymerization and/or depolymerization;0.0104670789911911!GO:0003746;translation elongation factor activity;0.0105438269275806!GO:0000786;nucleosome;0.0112917636642132!GO:0030032;lamellipodium biogenesis;0.0114594851748766!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0114665750868009!GO:0031529;ruffle organization and biogenesis;0.0120335892555976!GO:0005815;microtubule organizing center;0.0120579846425943!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0122568159555152!GO:0045047;protein targeting to ER;0.0122568159555152!GO:0006778;porphyrin metabolic process;0.0124536831349714!GO:0033013;tetrapyrrole metabolic process;0.0124536831349714!GO:0006383;transcription from RNA polymerase III promoter;0.0124851620006382!GO:0007040;lysosome organization and biogenesis;0.0124851620006382!GO:0005684;U2-dependent spliceosome;0.012878002171616!GO:0006118;electron transport;0.0134083292614398!GO:0051028;mRNA transport;0.0134083292614398!GO:0030131;clathrin adaptor complex;0.0134441848623987!GO:0045936;negative regulation of phosphate metabolic process;0.0135618410812466!GO:0008022;protein C-terminus binding;0.0135996613484393!GO:0044433;cytoplasmic vesicle part;0.0136319088951376!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0137952972143739!GO:0045941;positive regulation of transcription;0.0138745028890415!GO:0005096;GTPase activator activity;0.014576069441504!GO:0008180;signalosome;0.0146415135155236!GO:0006790;sulfur metabolic process;0.0146454197597618!GO:0044437;vacuolar part;0.0147272204195999!GO:0006082;organic acid metabolic process;0.0149094928360732!GO:0043022;ribosome binding;0.0149719566051907!GO:0019752;carboxylic acid metabolic process;0.0151734757027804!GO:0006897;endocytosis;0.015432779804291!GO:0010324;membrane invagination;0.015432779804291!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.015432779804291!GO:0045926;negative regulation of growth;0.0154491648397009!GO:0031072;heat shock protein binding;0.015552923321718!GO:0005862;muscle thin filament tropomyosin;0.0161495877380756!GO:0016197;endosome transport;0.0168977614139153!GO:0000049;tRNA binding;0.0169683521064749!GO:0001527;microfibril;0.0171115130013293!GO:0006352;transcription initiation;0.0173447609011053!GO:0046519;sphingoid metabolic process;0.0173447609011053!GO:0005765;lysosomal membrane;0.0182654333738936!GO:0008632;apoptotic program;0.0183765693663421!GO:0045893;positive regulation of transcription, DNA-dependent;0.0190174860317493!GO:0035035;histone acetyltransferase binding;0.0190174860317493!GO:0007033;vacuole organization and biogenesis;0.0190174860317493!GO:0030125;clathrin vesicle coat;0.0193642310847517!GO:0030665;clathrin coated vesicle membrane;0.0193642310847517!GO:0051101;regulation of DNA binding;0.0196394359611484!GO:0006892;post-Golgi vesicle-mediated transport;0.0196659570031897!GO:0008139;nuclear localization sequence binding;0.0196856335096971!GO:0030041;actin filament polymerization;0.0198854585938299!GO:0043433;negative regulation of transcription factor activity;0.0208729965591316!GO:0030833;regulation of actin filament polymerization;0.0210176369258612!GO:0003899;DNA-directed RNA polymerase activity;0.021597442528205!GO:0031625;ubiquitin protein ligase binding;0.0217061081447744!GO:0007030;Golgi organization and biogenesis;0.0220818767112227!GO:0008238;exopeptidase activity;0.0222852981157973!GO:0006401;RNA catabolic process;0.0223814280698943!GO:0008312;7S RNA binding;0.0231126377237604!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0236705981767617!GO:0033043;regulation of organelle organization and biogenesis;0.0236705981767617!GO:0030521;androgen receptor signaling pathway;0.0237441056213477!GO:0042168;heme metabolic process;0.0238250880648657!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0240478552505002!GO:0010257;NADH dehydrogenase complex assembly;0.0240478552505002!GO:0033108;mitochondrial respiratory chain complex assembly;0.0240478552505002!GO:0030145;manganese ion binding;0.0246526778184115!GO:0003756;protein disulfide isomerase activity;0.0252919552603358!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0252919552603358!GO:0046467;membrane lipid biosynthetic process;0.0256020576587825!GO:0008430;selenium binding;0.0264213751357903!GO:0006595;polyamine metabolic process;0.0264746205109365!GO:0022408;negative regulation of cell-cell adhesion;0.0266181293788403!GO:0031272;regulation of pseudopodium formation;0.0266373819496354!GO:0031269;pseudopodium formation;0.0266373819496354!GO:0031344;regulation of cell projection organization and biogenesis;0.0266373819496354!GO:0031268;pseudopodium organization and biogenesis;0.0266373819496354!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0266373819496354!GO:0031274;positive regulation of pseudopodium formation;0.0266373819496354!GO:0006354;RNA elongation;0.0268655128180827!GO:0046489;phosphoinositide biosynthetic process;0.0275726847667755!GO:0000082;G1/S transition of mitotic cell cycle;0.0278827389437167!GO:0016408;C-acyltransferase activity;0.0279407485548432!GO:0051540;metal cluster binding;0.0280334997299181!GO:0051536;iron-sulfur cluster binding;0.0280334997299181!GO:0033559;unsaturated fatty acid metabolic process;0.0280515697506802!GO:0006636;unsaturated fatty acid biosynthetic process;0.0280515697506802!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0281142149543944!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0281142149543944!GO:0048144;fibroblast proliferation;0.0284167737447738!GO:0048145;regulation of fibroblast proliferation;0.0284167737447738!GO:0000209;protein polyubiquitination;0.0287223759498016!GO:0050811;GABA receptor binding;0.0295009599945419!GO:0007242;intracellular signaling cascade;0.02951464085871!GO:0051098;regulation of binding;0.029642902129051!GO:0051059;NF-kappaB binding;0.03028864494857!GO:0033673;negative regulation of kinase activity;0.031164250973117!GO:0006469;negative regulation of protein kinase activity;0.031164250973117!GO:0012506;vesicle membrane;0.031303651713739!GO:0008538;proteasome activator activity;0.0316888685957832!GO:0042326;negative regulation of phosphorylation;0.0328656020603778!GO:0006739;NADP metabolic process;0.0332363285542186!GO:0031124;mRNA 3'-end processing;0.0339202264683787!GO:0008033;tRNA processing;0.0339737728383901!GO:0003711;transcription elongation regulator activity;0.0341071811906705!GO:0004228;gelatinase A activity;0.0349556466464178!GO:0001955;blood vessel maturation;0.0349556466464178!GO:0003690;double-stranded DNA binding;0.0353403781289059!GO:0001953;negative regulation of cell-matrix adhesion;0.0356671987564267!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0366808532184944!GO:0004784;superoxide dismutase activity;0.0366808532184944!GO:0031301;integral to organelle membrane;0.0367532169247073!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0368444956116768!GO:0043065;positive regulation of apoptosis;0.0368444956116768!GO:0006672;ceramide metabolic process;0.0374652057221288!GO:0005819;spindle;0.0377154186804881!GO:0009112;nucleobase metabolic process;0.0377566219879964!GO:0005583;fibrillar collagen;0.0383217727333289!GO:0051348;negative regulation of transferase activity;0.0383932604339427!GO:0000059;protein import into nucleus, docking;0.0386776233335665!GO:0030100;regulation of endocytosis;0.0386776233335665!GO:0006779;porphyrin biosynthetic process;0.0387706568866554!GO:0033014;tetrapyrrole biosynthetic process;0.0387706568866554!GO:0016584;nucleosome positioning;0.0388592387071068!GO:0005100;Rho GTPase activator activity;0.0388592387071068!GO:0051270;regulation of cell motility;0.0388592387071068!GO:0005832;chaperonin-containing T-complex;0.038913260122394!GO:0046979;TAP2 binding;0.0390934750781467!GO:0046977;TAP binding;0.0390934750781467!GO:0046978;TAP1 binding;0.0390934750781467!GO:0015631;tubulin binding;0.0393597035963547!GO:0043126;regulation of 1-phosphatidylinositol 4-kinase activity;0.0393597035963547!GO:0046813;virion attachment, binding of host cell surface receptor;0.0393597035963547!GO:0043128;positive regulation of 1-phosphatidylinositol 4-kinase activity;0.0393597035963547!GO:0030880;RNA polymerase complex;0.0394241824719042!GO:0005520;insulin-like growth factor binding;0.0394782466074506!GO:0046426;negative regulation of JAK-STAT cascade;0.0402558784621619!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0411882730855806!GO:0043068;positive regulation of programmed cell death;0.041348288832575!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.041862090896742!GO:0006984;ER-nuclear signaling pathway;0.0421446470352272!GO:0005637;nuclear inner membrane;0.0422322950716888!GO:0006007;glucose catabolic process;0.0428250045141051!GO:0006635;fatty acid beta-oxidation;0.0433236650330147!GO:0009966;regulation of signal transduction;0.0445638173094859!GO:0044452;nucleolar part;0.0449831751729779!GO:0048146;positive regulation of fibroblast proliferation;0.0451029701115808!GO:0005874;microtubule;0.0451830254992839!GO:0035258;steroid hormone receptor binding;0.0456778660708605!GO:0006376;mRNA splice site selection;0.0457855141452497!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0457855141452497!GO:0045045;secretory pathway;0.0460686405572236!GO:0007034;vacuolar transport;0.0462549945506584!GO:0004860;protein kinase inhibitor activity;0.0463529815740724!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0464308613625583!GO:0003955;NAD(P)H dehydrogenase (quinone) activity;0.0471566094560168!GO:0016860;intramolecular oxidoreductase activity;0.0473979701551396!GO:0005975;carbohydrate metabolic process;0.0476588813264676!GO:0046966;thyroid hormone receptor binding;0.0476832544218132!GO:0051539;4 iron, 4 sulfur cluster binding;0.047749893026777!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0486698299838046!GO:0030911;TPR domain binding;0.049044868390033!GO:0045334;clathrin-coated endocytic vesicle;0.0492290769500693
|sample_id=11348
|sample_id=11348
|sample_note=
|sample_note=
Line 75: Line 105:
|sample_tissue=hair follicle
|sample_tissue=hair follicle
|top_motifs=ALX4:2.57749610415;ZNF238:2.50235750771;UFEwm:2.37729176772;HES1:2.24515657159;ESR1:1.88587774927;HMX1:1.64295272444;MYBL2:1.64233475829;TFAP4:1.56695592535;GLI1..3:1.52700942848;PAX1,9:1.51844918477;TFAP2{A,C}:1.49548120181;NKX2-2,8:1.4663914895;RXR{A,B,G}:1.44278928805;ZBTB6:1.4237027752;FOXL1:1.40465026993;ZNF423:1.35397985565;GTF2A1,2:1.3320352085;XBP1:1.33193878748;KLF4:1.2984500464;EN1,2:1.29741803674;ATF6:1.26804761463;TP53:1.17653971602;GZF1:1.15442227585;HAND1,2:1.10104095271;NFIX:1.03462243056;HOX{A5,B5}:1.00041040051;PAX5:0.980429764188;NKX3-1:0.970548228659;RXRA_VDR{dimer}:0.959674993447;SRF:0.918675463683;NR6A1:0.916688671673;ZIC1..3:0.894020193142;EBF1:0.88051334408;MAZ:0.866740885773;NFATC1..3:0.835598032619;NFE2L1:0.824051770244;GTF2I:0.820913545185;XCPE1{core}:0.808347531526;TAL1_TCF{3,4,12}:0.777579725853;NKX3-2:0.771138776947;TEAD1:0.766765169726;GCM1,2:0.756711794889;MZF1:0.736725520899;NR3C1:0.734684610545;NKX2-1,4:0.72387233375;NANOG{mouse}:0.680710545901;SPZ1:0.663918913162;PATZ1:0.631206435412;GATA4:0.607065711772;TFAP2B:0.570976629956;TFCP2:0.546140979935;FOXD3:0.53127026465;HIF1A:0.526243743358;TLX1..3_NFIC{dimer}:0.506163314527;TOPORS:0.505040494444;GFI1B:0.494624603724;ZNF148:0.427574971483;IRF1,2:0.406803880569;YY1:0.367849706036;NR1H4:0.364595378655;RREB1:0.344852494767;HIC1:0.341891239634;TBX4,5:0.310425192085;LHX3,4:0.310021451935;TBP:0.278898187843;SMAD1..7,9:0.272840843793;HOX{A6,A7,B6,B7}:0.225382338667;SP1:0.221695352007;MTF1:0.19505530684;DMAP1_NCOR{1,2}_SMARC:0.184236103616;MYFfamily:0.181082092758;EGR1..3:0.16282165921;MAFB:0.159650890072;PRDM1:0.153654605731;IKZF1:0.149323152318;NFE2L2:0.135476637543;EVI1:0.130399699438;HSF1,2:0.114943160197;HNF1A:0.107686781688;HMGA1,2:0.100201271077;MTE{core}:0.0863465667495;REST:0.064644121781;TEF:0.0561083498734;ZNF384:0.0533937146941;SOX5:0.0525726823053;ESRRA:0.0252459976335;HOX{A4,D4}:0.0250253963616;IRF7:-0.0163742240701;GFI1:-0.0197753024922;AIRE:-0.0276144014747;FOXO1,3,4:-0.0692678998522;STAT2,4,6:-0.0721882730227;SOX17:-0.0835473086096;TFDP1:-0.0919530185181;BACH2:-0.10532065502;PPARG:-0.164513984802;ONECUT1,2:-0.165358424518;POU2F1..3:-0.176071603177;NHLH1,2:-0.185501274404;AR:-0.186875806143;NKX6-1,2:-0.194856855902;EP300:-0.203127459441;NFKB1_REL_RELA:-0.203441993736;FOS_FOS{B,L1}_JUN{B,D}:-0.209845776114;T:-0.213941245231;HLF:-0.218129389165;LEF1_TCF7_TCF7L1,2:-0.225123013924;POU5F1:-0.229258710705;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.234772563548;ZBTB16:-0.247907622804;POU3F1..4:-0.25592489909;MED-1{core}:-0.258722696888;ARID5B:-0.266580645184;DBP:-0.269175219934;NR5A1,2:-0.294456790038;RUNX1..3:-0.300012261978;ZFP161:-0.310109618186;MEF2{A,B,C,D}:-0.310322114196;HNF4A_NR2F1,2:-0.338606713097;NFE2:-0.361202170043;POU6F1:-0.388120382608;ZNF143:-0.405910094216;CDC5L:-0.409038556156;NKX2-3_NKX2-5:-0.418350203019;HOXA9_MEIS1:-0.472773709506;SPI1:-0.48311575474;SNAI1..3:-0.502978527556;MYB:-0.511945991122;STAT1,3:-0.517683029063;ETS1,2:-0.520580072435;SOX{8,9,10}:-0.529611317922;RFX1:-0.530948031247;FOSL2:-0.5548221209;PAX3,7:-0.571610443025;FOXM1:-0.586365255707;STAT5{A,B}:-0.590696534213;bHLH_family:-0.592999729472;PBX1:-0.610419652811;FOXA2:-0.61070526222;POU1F1:-0.61097014956;NFIL3:-0.642744574771;SPIB:-0.657367786487;CEBPA,B_DDIT3:-0.662827290449;PAX8:-0.720765829106;AHR_ARNT_ARNT2:-0.723474742078;ADNP_IRX_SIX_ZHX:-0.723796261841;IKZF2:-0.737159812371;PRRX1,2:-0.739231147496;ZEB1:-0.740515314932;CRX:-0.748830331375;ELK1,4_GABP{A,B1}:-0.762617700632;NFY{A,B,C}:-0.768607394616;ATF5_CREB3:-0.784692404684;ATF4:-0.809155625758;NRF1:-0.809888743668;FOXP1:-0.812704313801;FOXP3:-0.828182591257;PAX2:-0.841431532204;FOX{D1,D2}:-0.846845949974;PAX4:-0.850376913651;CDX1,2,4:-0.85059650413;TGIF1:-0.89826307015;RORA:-0.899433764985;MYOD1:-0.904089057702;FOXN1:-0.920724216831;PITX1..3:-0.922388531393;PAX6:-0.959691564329;OCT4_SOX2{dimer}:-0.963475471906;ELF1,2,4:-0.965086027558;CUX2:-0.970722074741;RFX2..5_RFXANK_RFXAP:-1.00329264857;E2F1..5:-1.01192429039;SREBF1,2:-1.01829892495;LMO2:-1.02036825573;CREB1:-1.08471667888;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.09206577544;ALX1:-1.1018531881;JUN:-1.10842510368;BPTF:-1.11846890031;SOX2:-1.15971872472;GATA6:-1.22584673003;RBPJ:-1.31544003733;ATF2:-1.3164320932;FOXQ1:-1.38330033517;HBP1_HMGB_SSRP1_UBTF:-1.46523556159;BREu{core}:-1.47986937215;FOX{I1,J2}:-1.58205351556;PDX1:-1.68800062497;NANOG:-1.71026713981;FOX{F1,F2,J1}:-1.98184137724;TLX2:-2.19874570822;VSX1,2:-2.28942335261
|top_motifs=ALX4:2.57749610415;ZNF238:2.50235750771;UFEwm:2.37729176772;HES1:2.24515657159;ESR1:1.88587774927;HMX1:1.64295272444;MYBL2:1.64233475829;TFAP4:1.56695592535;GLI1..3:1.52700942848;PAX1,9:1.51844918477;TFAP2{A,C}:1.49548120181;NKX2-2,8:1.4663914895;RXR{A,B,G}:1.44278928805;ZBTB6:1.4237027752;FOXL1:1.40465026993;ZNF423:1.35397985565;GTF2A1,2:1.3320352085;XBP1:1.33193878748;KLF4:1.2984500464;EN1,2:1.29741803674;ATF6:1.26804761463;TP53:1.17653971602;GZF1:1.15442227585;HAND1,2:1.10104095271;NFIX:1.03462243056;HOX{A5,B5}:1.00041040051;PAX5:0.980429764188;NKX3-1:0.970548228659;RXRA_VDR{dimer}:0.959674993447;SRF:0.918675463683;NR6A1:0.916688671673;ZIC1..3:0.894020193142;EBF1:0.88051334408;MAZ:0.866740885773;NFATC1..3:0.835598032619;NFE2L1:0.824051770244;GTF2I:0.820913545185;XCPE1{core}:0.808347531526;TAL1_TCF{3,4,12}:0.777579725853;NKX3-2:0.771138776947;TEAD1:0.766765169726;GCM1,2:0.756711794889;MZF1:0.736725520899;NR3C1:0.734684610545;NKX2-1,4:0.72387233375;NANOG{mouse}:0.680710545901;SPZ1:0.663918913162;PATZ1:0.631206435412;GATA4:0.607065711772;TFAP2B:0.570976629956;TFCP2:0.546140979935;FOXD3:0.53127026465;HIF1A:0.526243743358;TLX1..3_NFIC{dimer}:0.506163314527;TOPORS:0.505040494444;GFI1B:0.494624603724;ZNF148:0.427574971483;IRF1,2:0.406803880569;YY1:0.367849706036;NR1H4:0.364595378655;RREB1:0.344852494767;HIC1:0.341891239634;TBX4,5:0.310425192085;LHX3,4:0.310021451935;TBP:0.278898187843;SMAD1..7,9:0.272840843793;HOX{A6,A7,B6,B7}:0.225382338667;SP1:0.221695352007;MTF1:0.19505530684;DMAP1_NCOR{1,2}_SMARC:0.184236103616;MYFfamily:0.181082092758;EGR1..3:0.16282165921;MAFB:0.159650890072;PRDM1:0.153654605731;IKZF1:0.149323152318;NFE2L2:0.135476637543;EVI1:0.130399699438;HSF1,2:0.114943160197;HNF1A:0.107686781688;HMGA1,2:0.100201271077;MTE{core}:0.0863465667495;REST:0.064644121781;TEF:0.0561083498734;ZNF384:0.0533937146941;SOX5:0.0525726823053;ESRRA:0.0252459976335;HOX{A4,D4}:0.0250253963616;IRF7:-0.0163742240701;GFI1:-0.0197753024922;AIRE:-0.0276144014747;FOXO1,3,4:-0.0692678998522;STAT2,4,6:-0.0721882730227;SOX17:-0.0835473086096;TFDP1:-0.0919530185181;BACH2:-0.10532065502;PPARG:-0.164513984802;ONECUT1,2:-0.165358424518;POU2F1..3:-0.176071603177;NHLH1,2:-0.185501274404;AR:-0.186875806143;NKX6-1,2:-0.194856855902;EP300:-0.203127459441;NFKB1_REL_RELA:-0.203441993736;FOS_FOS{B,L1}_JUN{B,D}:-0.209845776114;T:-0.213941245231;HLF:-0.218129389165;LEF1_TCF7_TCF7L1,2:-0.225123013924;POU5F1:-0.229258710705;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.234772563548;ZBTB16:-0.247907622804;POU3F1..4:-0.25592489909;MED-1{core}:-0.258722696888;ARID5B:-0.266580645184;DBP:-0.269175219934;NR5A1,2:-0.294456790038;RUNX1..3:-0.300012261978;ZFP161:-0.310109618186;MEF2{A,B,C,D}:-0.310322114196;HNF4A_NR2F1,2:-0.338606713097;NFE2:-0.361202170043;POU6F1:-0.388120382608;ZNF143:-0.405910094216;CDC5L:-0.409038556156;NKX2-3_NKX2-5:-0.418350203019;HOXA9_MEIS1:-0.472773709506;SPI1:-0.48311575474;SNAI1..3:-0.502978527556;MYB:-0.511945991122;STAT1,3:-0.517683029063;ETS1,2:-0.520580072435;SOX{8,9,10}:-0.529611317922;RFX1:-0.530948031247;FOSL2:-0.5548221209;PAX3,7:-0.571610443025;FOXM1:-0.586365255707;STAT5{A,B}:-0.590696534213;bHLH_family:-0.592999729472;PBX1:-0.610419652811;FOXA2:-0.61070526222;POU1F1:-0.61097014956;NFIL3:-0.642744574771;SPIB:-0.657367786487;CEBPA,B_DDIT3:-0.662827290449;PAX8:-0.720765829106;AHR_ARNT_ARNT2:-0.723474742078;ADNP_IRX_SIX_ZHX:-0.723796261841;IKZF2:-0.737159812371;PRRX1,2:-0.739231147496;ZEB1:-0.740515314932;CRX:-0.748830331375;ELK1,4_GABP{A,B1}:-0.762617700632;NFY{A,B,C}:-0.768607394616;ATF5_CREB3:-0.784692404684;ATF4:-0.809155625758;NRF1:-0.809888743668;FOXP1:-0.812704313801;FOXP3:-0.828182591257;PAX2:-0.841431532204;FOX{D1,D2}:-0.846845949974;PAX4:-0.850376913651;CDX1,2,4:-0.85059650413;TGIF1:-0.89826307015;RORA:-0.899433764985;MYOD1:-0.904089057702;FOXN1:-0.920724216831;PITX1..3:-0.922388531393;PAX6:-0.959691564329;OCT4_SOX2{dimer}:-0.963475471906;ELF1,2,4:-0.965086027558;CUX2:-0.970722074741;RFX2..5_RFXANK_RFXAP:-1.00329264857;E2F1..5:-1.01192429039;SREBF1,2:-1.01829892495;LMO2:-1.02036825573;CREB1:-1.08471667888;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.09206577544;ALX1:-1.1018531881;JUN:-1.10842510368;BPTF:-1.11846890031;SOX2:-1.15971872472;GATA6:-1.22584673003;RBPJ:-1.31544003733;ATF2:-1.3164320932;FOXQ1:-1.38330033517;HBP1_HMGB_SSRP1_UBTF:-1.46523556159;BREu{core}:-1.47986937215;FOX{I1,J2}:-1.58205351556;PDX1:-1.68800062497;NANOG:-1.71026713981;FOX{F1,F2,J1}:-1.98184137724;TLX2:-2.19874570822;VSX1,2:-2.28942335261
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11348-117G7;search_select_hide=table117:FF:11348-117G7
}}
}}

Latest revision as of 17:54, 4 June 2020

Name:Hair Follicle Dermal Papilla Cells, donor2
Species:Human (Homo sapiens)
Library ID:CNhs11979
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuehair follicle
dev stage51 years old adult
sexfemale
age51
cell typehair follicle, dermal papilla cell
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number1866
catalog numberCA602-R10a
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004905
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11979 CAGE DRX008297 DRR009169
Accession ID Hg19

Library idBAMCTSS
CNhs11979 DRZ000594 DRZ001979
Accession ID Hg38

Library idBAMCTSS
CNhs11979 DRZ011944 DRZ013329
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004905
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10007.AGTTCC sRNA-Seq DRX037099 DRR041465
Accession ID Hg19

Library idBAMCTSS
SRhi10007.AGTTCC DRZ007107


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.11
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.249
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair1.027
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.168
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0235
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes1.207
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.297
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.448
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.216
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0512
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.359
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.192
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.205
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.625
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.467
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.216
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.359
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.741
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.902
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11979

Jaspar motifP-value
MA0002.20.643
MA0003.10.169
MA0004.10.334
MA0006.10.0928
MA0007.10.549
MA0009.10.406
MA0014.10.407
MA0017.10.803
MA0018.22.17428e-5
MA0019.10.437
MA0024.13.65497e-5
MA0025.10.00904
MA0027.10.592
MA0028.10.00181
MA0029.10.629
MA0030.10.0103
MA0031.10.00759
MA0035.20.0211
MA0038.10.0162
MA0039.20.268
MA0040.10.931
MA0041.10.493
MA0042.10.732
MA0043.11.43037e-7
MA0046.10.593
MA0047.20.346
MA0048.10.213
MA0050.10.0188
MA0051.10.0282
MA0052.10.0932
MA0055.10.834
MA0057.10.0978
MA0058.10.186
MA0059.10.989
MA0060.11.24962e-4
MA0061.10.913
MA0062.24.71329e-8
MA0065.20.593
MA0066.10.504
MA0067.10.00747
MA0068.10.687
MA0069.10.233
MA0070.10.689
MA0071.10.927
MA0072.10.485
MA0073.10.645
MA0074.10.173
MA0076.12.30744e-4
MA0077.10.344
MA0078.10.652
MA0079.20.469
MA0080.28.54422e-7
MA0081.10.00399
MA0083.10.0486
MA0084.10.276
MA0087.10.952
MA0088.10.732
MA0090.10.0714
MA0091.10.0402
MA0092.10.298
MA0093.10.249
MA0099.22.83081e-4
MA0100.10.145
MA0101.10.135
MA0102.20.134
MA0103.10.325
MA0104.20.0308
MA0105.10.396
MA0106.10.208
MA0107.10.217
MA0108.20.204
MA0111.10.703
MA0112.20.00375
MA0113.10.547
MA0114.10.548
MA0115.10.231
MA0116.10.104
MA0117.10.175
MA0119.10.495
MA0122.10.161
MA0124.10.132
MA0125.10.126
MA0131.10.0686
MA0135.10.856
MA0136.17.14642e-10
MA0137.20.195
MA0138.20.12
MA0139.10.629
MA0140.10.0142
MA0141.10.506
MA0142.10.977
MA0143.10.658
MA0144.10.767
MA0145.10.22
MA0146.10.287
MA0147.10.0465
MA0148.10.404
MA0149.10.743
MA0150.10.00889
MA0152.10.0552
MA0153.10.237
MA0154.10.0775
MA0155.10.0274
MA0156.18.73722e-8
MA0157.10.0939
MA0159.10.735
MA0160.10.254
MA0162.10.0362
MA0163.10.0622
MA0164.10.969
MA0258.10.107
MA0259.10.101



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11979

Novel motifP-value
10.894
100.784
1000.909
1010.34
1020.496
1030.397
1040.665
1050.535
1060.0204
1070.00792
1080.36
1090.178
110.247
1100.281
1110.602
1120.393
1130.0062
1140.379
1150.0182
1160.0295
1170.709
1180.793
1190.732
120.473
1200.196
1210.938
1220.0326
1230.0128
1240.685
1250.833
1260.969
1270.945
1280.0195
1290.63
130.875
1300.332
1310.592
1320.146
1330.45
1340.795
1350.897
1360.565
1370.221
1380.609
1390.984
140.349
1400.447
1410.322
1420.286
1430.65
1440.505
1450.278
1460.975
1470.0501
1480.688
1490.0161
150.44
1500.21
1510.743
1520.0321
1530.62
1540.66
1550.163
1560.778
1570.476
1580.0153
1590.657
160.0925
1600.364
1610.651
1620.195
1630.713
1640.552
1650.186
1660.677
1670.0706
1680.891
1690.0617
170.284
180.447
190.0053
20.134
200.713
210.219
220.183
230.19
240.83
250.418
260.0598
270.332
280.278
290.642
30.775
300.159
310.64
321.0765e-10
330.813
340.484
350.981
360.0116
370.162
380.825
390.281
40.488
400.437
410.651
420.532
430.325
440.095
450.395
460.137
470.808
480.535
490.97
50.713
500.49
510.494
520.341
530.396
540.527
550.428
560.677
570.935
580.588
590.0116
60.903
600.373
610.232
620.568
630.368
640.816
650.35
660.27
670.77
680.521
690.575
70.348
700.359
710.558
720.797
730.0262
740.856
750.93
760.735
770.00352
780.918
792.95825e-4
80.171
800.184
810.944
820.0882
830.00511
840.579
850.00802
860.567
870.0745
880.467
890.0453
90.307
900.558
910.872
920.53
930.448
940.612
950.495
960.88
970.972
980.972
990.00571



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11979


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002559 (hair follicle cell)
0000346 (hair follicle dermal papilla cell)
1000428 (stem cell of epidermis)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001003 (skin epidermis)
0002097 (skin of body)
0002199 (integument)
0002073 (hair follicle)
0000483 (epithelium)
0002384 (connective tissue)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0004923 (organ component layer)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003102 (surface structure)
0007376 (outer epithelium)
0010371 (ecto-epithelium)
0010317 (germ layer / neural crest derived structure)
0000412 (dermal papilla)
0002067 (dermis)
0001992 (papillary layer of dermis)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000072 (human hair follicle cell sample)
0000001 (sample)
0000071 (human hair follicle dermal papilla cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000134 (mesenchymal cell)
CL:0000221 (ectodermal cell)

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