UBERON:0002097
From FANTOM5_SSTAR
| Name: | skin of body | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "Nonparenchymatous organ that consists of the dermis and epidermis. Subdivisions of the skin surround various body parts; as a whole, the skin constitutes the external layer of the body. Examples: There is only one skin[FMA]. Surface structure that consists of the external membranous integument of the animal." [FMA:7163, OMD:skin, Wikipedia:Skin] | |
| Xrefs: |
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| Synonyms: |
"entire skin" EXACT [] "integument" RELATED [] "pelt" RELATED [] "skin" RELATED [] | |
| Comments: | Note that FMA uses 'skin' for the entire organ. XAO seems consistent. MA seems to use it analagously to zone of skin | |
| Alt_id: | UBERON:FMA_7163-MA_0000151-MIAA_0000284-XAO_0000023 | |
| Subset: |
major_organ uberon_slim |
200px-Skin.svg.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000062(organ),UBERON:0004121(ectoderm-derived structure) |
|---|---|
| develops_from: | UBERON:0011272(embryonic skin basal layer) |
| part_of: | UBERON:0002199(integument) |
Children
| is a: | FF:0011174 (Skin - armpit hair follicle),FF:0011178 (Skin - torso) |
|---|---|
| part of: | UBERON:0000014 (zone of skin),UBERON:0001003 (skin epidermis),UBERON:0001705 (nail),UBERON:0002067 (dermis),UBERON:0002284 (hyponychium),UBERON:0002419 (skin gland),CL:0002620 (skin fibroblast),UBERON:0003487 (skin sebaceous gland) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10273-104E3
- 10283-104F4
- 10284-104F5
- 10285-104F6
- 10286-104F7 (Skin - palm, donor1)
- 10287-104F8
- 10288-104F9 (tongue epidermis (fungiform papillae), donor1)
- 10289-104G1
... further results Mouse (Mus musculus)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10273-104E3
- 10283-104F4
- 10284-104F5
- 10285-104F6
- 10286-104F7 (Skin - palm, donor1)
- 10287-104F8
- 10288-104F9 (tongue epidermis (fungiform papillae), donor1)
- 10289-104G1
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002097 (skin of body), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
