FFCP PHASE1:Hg19::chr21:46826248..46826282,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr21:46826248..46826282,- | |||
|description=CAGE_peak_at_chr21:46826248..46826282,- | |||
|id=chr21:46826248..46826282,- | |||
|ontology_enrichment_celltype=CL:0000066!5.23e-15!254;CL:0002139!4.27e-13!24;CL:1000507!4.69e-13!12;CL:1000494!4.69e-13!12;CL:1000497!6.82e-13!18;CL:0002518!6.82e-13!18;CL:0002078!1.91e-12!44;CL:1000449!9.07e-11!16;CL:0000115!9.70e-11!35;CL:0000071!1.00e-10!18;CL:0002546!1.00e-10!18;CL:0000213!2.16e-09!57;CL:0000215!2.16e-09!57;CL:0002321!8.26e-08!248;CL:0002543!1.44e-07!6;CL:0002681!1.75e-07!13;CL:0002584!1.75e-07!13;CL:0000220!2.93e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.24e-55;10!CL:1000494;1.24e-55;10!CL:1000497;1.01e-53;17!CL:0002518;1.01e-53;17!CL:1000449;3.32e-44;15!CL:0002681;2.93e-29;12!CL:0002584;2.93e-29;12!CL:0002139;1.08e-20;24!CL:0000239;7.95e-18;3!CL:1000615;7.95e-18;3!CL:0002306;7.95e-18;3!CL:0002078;3.25e-16;45!CL:0000115;2.04e-15;36!CL:0002138;1.45e-14;6!CL:0000650;2.46e-12;2!CL:1000500;2.46e-12;2!CL:1000618;2.46e-12;2!CL:1001318;2.46e-12;2!CL:0002173;2.46e-12;2!CL:0000071;2.35e-10;18!CL:0002543;1.06e-08;6!CL:0002144;2.20e-08;3!CL:1000746;7.31e-08;7!CL:1000612;7.31e-08;7!CL:0000213;9.57e-08;58!CL:0000215;9.57e-08;58!CL:0000313;5.41e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.32e-55,10;CL:1000494,1.32e-55,10;CL:1000497,8.92e-54,17;CL:0002518,8.92e-54,17;CL:1000449,3.62e-44,15;CL:0002681,3.11e-29,12;CL:0002584,3.11e-29,12;CL:0002078,4.36e-24,45;CL:0002139,1.13e-20,24;CL:0000115,3.10e-19,36;CL:0000239,8.19e-18,3;CL:1000615,8.19e-18,3;CL:0002306,8.19e-18,3;CL:0000066,5.43e-16,253;CL:0005020,1.77e-14,6;CL:0002138,1.77e-14,6;CL:0005022,1.77e-14,6;CL:0000650,2.68e-12,2;CL:1000500,2.68e-12,2;CL:1000618,2.68e-12,2;CL:1001318,2.68e-12,2;CL:0002173,2.68e-12,2;CL:0000213,4.82e-11,58;CL:0000215,4.82e-11,58;CL:0000071,2.22e-10,18;CL:0002546,2.22e-10,18;CL:0002543,1.09e-08,6;CL:0002144,2.12e-08,3;CL:0000222,4.27e-08,121;CL:1000746,7.75e-08,7;CL:1000612,7.75e-08,7;CL:0000313,5.26e-07,1 | |||
|ontology_enrichment_development_v019=CL:0005022;1.45e-14;6!CL:0002546;2.35e-10;18 | |||
|ontology_enrichment_disease=DOID:299!3.41e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.83e-11;2!DOID:299;3.16e-07;25!DOID:2152;5.41e-07;1!DOID:3347;6.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,8.58e-12,2;DOID:299,2.86e-07,25;DOID:2152,5.26e-07,1;DOID:3347,6.24e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003914!8.14e-16!118;UBERON:0004111!1.14e-14!241;UBERON:0006554!2.19e-13!44;UBERON:0009773!4.69e-13!12;UBERON:0001231!4.69e-13!12;UBERON:0004810!4.69e-13!12;UBERON:0000489!5.11e-13!32;UBERON:0001008!6.97e-13!45;UBERON:0000025!1.53e-12!194;UBERON:0003064!1.83e-12!37;UBERON:0002113!2.28e-12!27;UBERON:0003918!2.28e-12!27;UBERON:0005095!2.28e-12!27;UBERON:0007687!2.28e-12!27;UBERON:0000477!2.78e-12!286;UBERON:0000119!6.44e-12!312;UBERON:0006555!1.47e-11!17;UBERON:0005103!1.47e-11!17;UBERON:0000083!1.47e-11!17;UBERON:0009201!1.47e-11!17;UBERON:0004819!1.47e-11!17;UBERON:0006553!1.47e-11!17;UBERON:0003074!1.47e-11!17;UBERON:0003060!1.47e-11!17;UBERON:0000483!1.64e-11!309;UBERON:0000058!3.66e-11!26;UBERON:0000487!6.37e-11!22;UBERON:0004211!9.07e-11!16;UBERON:0001285!9.07e-11!16;UBERON:0007684!9.07e-11!16;UBERON:0003220!9.07e-11!16;UBERON:0004208!9.07e-11!16;UBERON:0001986!1.00e-10!18;UBERON:0004638!1.00e-10!18;UBERON:0004852!1.00e-10!18;UBERON:0004876!1.09e-10!20;UBERON:0000080!1.16e-10!18;UBERON:0002120!1.16e-10!18;UBERON:0004875!1.16e-10!18;UBERON:0005721!1.16e-10!18;UBERON:0005754!1.16e-10!18;UBERON:0007297!1.16e-10!18;UBERON:0006914!4.05e-10!25;UBERON:0002049!5.05e-10!79;UBERON:0007798!5.05e-10!79;UBERON:0005172!5.21e-10!55;UBERON:0005173!5.21e-10!55;UBERON:0000055!8.72e-10!69;UBERON:0003887!1.67e-08!21;UBERON:0002417!3.54e-08!61;UBERON:0000916!3.54e-08!61;UBERON:0000353!7.19e-08!17;UBERON:0001981!8.22e-08!60;UBERON:0007500!8.22e-08!60;UBERON:0004537!8.22e-08!60;UBERON:0006965!8.22e-08!60;UBERON:0001851!8.47e-08!16;UBERON:0001225!1.75e-07!13;UBERON:0008987!1.75e-07!13;UBERON:0003103!2.27e-07!69;UBERON:0000490!3.17e-07!138;UBERON:0003886!6.40e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.24e-55;10!UBERON:0009773;1.24e-55;10!UBERON:0001231;1.24e-55;10!UBERON:0004810;1.24e-55;10!UBERON:0006555;3.32e-44;15!UBERON:0004819;3.32e-44;15!UBERON:0001285;3.32e-44;15!UBERON:0007684;3.32e-44;15!UBERON:0002113;4.35e-43;24!UBERON:0011143;4.35e-43;24!UBERON:0000489;3.86e-35;29!UBERON:0006554;7.21e-34;30!UBERON:0001008;7.21e-34;30!UBERON:0001225;2.93e-29;12!UBERON:0008987;2.93e-29;12!UBERON:0000353;5.29e-29;15!UBERON:0001851;3.66e-23;15!UBERON:0006853;7.95e-18;3!UBERON:0007685;7.95e-18;3!UBERON:0004134;7.95e-18;3!UBERON:0005172;1.37e-15;52!UBERON:0005173;1.37e-15;52!UBERON:0003914;1.02e-13;74!UBERON:0003567;2.46e-12;2!UBERON:0003838;2.46e-12;2!UBERON:0003586;2.46e-12;2!UBERON:0005169;2.46e-12;2!UBERON:0002321;2.46e-12;2!UBERON:0005215;2.46e-12;2!UBERON:0002303;2.46e-12;2!UBERON:0002319;2.46e-12;2!UBERON:0000487;3.48e-11;22!UBERON:0002417;4.02e-11;58!UBERON:0000916;4.02e-11;58!UBERON:0001473;5.83e-11;8!UBERON:0004536;5.83e-11;8!UBERON:0006558;5.83e-11;8!UBERON:0004638;2.35e-10;18!UBERON:0001986;2.35e-10;18!UBERON:0004852;2.35e-10;18!UBERON:0000025;9.45e-10;93!UBERON:0006914;9.76e-10;25!UBERON:0002465;8.63e-09;10!UBERON:0010523;2.20e-08;3!UBERON:0001915;2.20e-08;3!UBERON:0001982;2.20e-08;3!UBERON:0000074;7.31e-08;7!UBERON:0001229;7.31e-08;7!UBERON:0003103;7.56e-08;61!UBERON:0005177;2.07e-07;99!UBERON:0000490;5.37e-07;33!UBERON:0004911;5.41e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.32e-55,10;UBERON:0004211,3.62e-44,15;UBERON:0009773,3.62e-44,15;UBERON:0001231,3.62e-44,15;UBERON:0001285,3.62e-44,15;UBERON:0007684,3.62e-44,15;UBERON:0004208,3.62e-44,15;UBERON:0006555,2.84e-41,16;UBERON:0004819,2.84e-41,16;UBERON:0002113,1.42e-39,26;UBERON:0003918,1.42e-39,26;UBERON:0011143,1.42e-39,26;UBERON:0005095,1.42e-39,26;UBERON:0007687,1.42e-39,26;UBERON:0000489,1.05e-32,31;UBERON:0001225,3.11e-29,12;UBERON:0008987,3.11e-29,12;UBERON:0000353,5.13e-29,15;UBERON:0006554,1.35e-23,47;UBERON:0001851,3.84e-23,15;UBERON:0001008,4.90e-23,48;UBERON:0005172,4.95e-23,54;UBERON:0005173,4.95e-23,54;UBERON:0002417,2.24e-20,60;UBERON:0000916,2.24e-20,60;UBERON:0003914,5.24e-18,117;UBERON:0006853,8.19e-18,3;UBERON:0007685,8.19e-18,3;UBERON:0004134,8.19e-18,3;UBERON:0003103,2.83e-13,68;UBERON:0003567,2.68e-12,2;UBERON:0003838,2.68e-12,2;UBERON:0003586,2.68e-12,2;UBERON:0005169,2.68e-12,2;UBERON:0002321,2.68e-12,2;UBERON:0005215,2.68e-12,2;UBERON:0002303,2.68e-12,2;UBERON:0002319,2.68e-12,2;UBERON:0005177,3.43e-12,101;UBERON:0009569,4.34e-12,112;UBERON:0004111,5.64e-12,240;UBERON:0000487,3.65e-11,22;UBERON:0001473,6.75e-11,8;UBERON:0004536,6.75e-11,8;UBERON:0006558,6.75e-11,8;UBERON:0004638,2.22e-10,18;UBERON:0001986,2.22e-10,18;UBERON:0004852,2.22e-10,18;UBERON:0000025,4.33e-10,192;UBERON:0000058,1.02e-09,19;UBERON:0006914,1.02e-09,25;UBERON:0000055,5.42e-09,68;UBERON:0002465,9.68e-09,10;UBERON:0010523,2.12e-08,3;UBERON:0001915,2.12e-08,3;UBERON:0001982,2.12e-08,3;UBERON:0003104,2.66e-08,160;UBERON:0009142,2.66e-08,160;UBERON:0010532,7.75e-08,7;UBERON:0000074,7.75e-08,7;UBERON:0001229,7.75e-08,7;UBERON:0001230,7.75e-08,7;UBERON:0003220,7.75e-08,7;UBERON:0005749,7.75e-08,7;UBERON:0004199,7.75e-08,7;UBERON:0004209,7.75e-08,7;UBERON:0004198,7.75e-08,7;UBERON:0002100,1.34e-07,199;UBERON:0002049,1.50e-07,78;UBERON:0007798,1.50e-07,78;UBERON:0004911,5.26e-07,1;UBERON:0005103,6.60e-07,8;UBERON:0000083,6.60e-07,8;UBERON:0009201,6.60e-07,8;UBERON:0006553,6.60e-07,8;UBERON:0003074,6.60e-07,8;UBERON:0003060,6.60e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0.443458794925128,0.263504357079378,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,1.33888245105868,3.22263453687318,0.760272105718513,3.66093086322254,1.47065232138347,0,0.17859945656816,1.34717623575702,0.563057402416611,3.06633274931766,2.84779697870439,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0.538842688278752,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.365921118388786,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0.502644862058154,0.277765335475589,0,0,0,0.463721619900307,0.234817388471643,2.88732895522148,3.24089858803628,1.14152491340759,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.552485933615378,0,0,0.262248829918848,6.76799419361118,5.2370429231002,14.1182958451834,10.2297457257282,7.07195913582267,0,0.340187410553031,0,6.16909010761157,2.16757150035082,8.52872615553251,5.09752546090077,7.47968408035852,4.25362033972139,0,0.522870902049801,0.512900250232778,0,0.976135183992909,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.811641507850816,1.239293992399,0.563391205064483,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.293016358543788,0.121360521749513,0,1.13654458722565,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0.539210106883961,0.358042349351218,0,0.394573622547734,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,1.89898258075224,1.95879369790977,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0.853828638089378,0,1.38847790668105,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,1.49417096317547,0,0.144090417154106,0.114536596165916,0,0.14405479798815,0.124252535565433,0,0.271808412147228,0.313808538937,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0.315132729228895,0.164831716762333,0.202210631562555,0,0,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0,0,0,0,1.33969702408637,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.655745261419609,0,0.886068179966986,0,0.1251909307065,1.14681839138014,0.221858103073705,0.18628920882415,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.310525913752519,0,0,0,0,0.380805212168795,0,0,0.429642228169954,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0.521988583930423,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0.183428598521679,0,0,3.4517996303005,0,0.150420656698515,0,0,0,0,1.03499260351932,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,1.22354542081276,0.078493092850514,0.157115589916002,0,0,1.72742072974897,2.38875843943525,0.285906176706625,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0.4582137370881,0.93061915699296,0,4.92163899910286,0.392600934460972,6.70548587402482,0,0.307988420568741,0,0,0.467878926924211,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0.0918948995348449,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0.134704106029175,0.0717222053926763,0.332660356546013,0.244209805832924,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr21:46826248..46826282,- | |||
}} |
Latest revision as of 18:37, 28 July 2015
Short description: | p@chr21:46826248..46826282, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:46826248..46826282, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|