FFCP PHASE1:Hg19::chr8:120079398..120079416,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:120079398..120079416,+
|short_description=p3@COLEC10
|description=CAGE_peak_3_at_COLEC10_5end
|association_with_transcript=-7bp_to_NM_006438,uc003yoo.2_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10584 | |EntrezGene=10584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2220 | |HGNC=2220 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6Z7 | |UniProt=Q9Y6Z7 | ||
|association_with_transcript=-7bp_to_NM_006438,uc003yoo.2_5end | |||
|cluster_id=chr8:120079398..120079416,+ | |||
|coexpression_cluster_id=C4721 | |||
|description=CAGE_peak_3_at_COLEC10_5end | |||
|id=chr8:120079398..120079416,+ | |||
|ontology_enrichment_celltype=CL:0002622!2.12e-12!3;CL:0002504!2.37e-12!3;CL:1000279!2.37e-12!3;CL:1000280!2.37e-12!3;CL:0002195!4.78e-09!2;CL:0002571!4.78e-09!2;CL:0000632!2.09e-08!2;CL:0002552!3.87e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002504;6.11e-30;3!CL:1000279;6.11e-30;3!CL:1000280;6.11e-30;3!CL:0002195;2.43e-21;2!CL:0002571;2.43e-21;2!CL:0002622;1.85e-14;3!CL:0000632;2.68e-14;3!CL:0000222;3.63e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,4.53e-30,3;CL:1000279,4.53e-30,3;CL:1000280,4.53e-30,3;CL:0002195,2.55e-21,2;CL:0002571,2.55e-21,2;CL:0002622,1.98e-14,3;CL:0000632,2.59e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.27e-09;11!UBERON:0009497;1.25e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;1.06e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.06e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0003929!1.00e-20!54;UBERON:0002107!1.18e-18!19;UBERON:0006925!1.18e-18!19;UBERON:0008836!1.18e-18!19;UBERON:0009497!1.59e-16!25;UBERON:0000015!1.59e-16!25;UBERON:0002423!1.59e-16!25;UBERON:0006235!1.59e-16!25;UBERON:0004161!1.59e-16!25;UBERON:0008835!8.10e-16!22;UBERON:0003894!8.10e-16!22;UBERON:0009854!4.89e-15!23;UBERON:0005911!5.19e-15!82;UBERON:0007499!1.16e-13!25;UBERON:0005057!4.67e-13!26;UBERON:0009856!4.67e-13!26;UBERON:0001007!5.30e-13!155;UBERON:0001555!5.30e-13!155;UBERON:0007026!5.30e-13!155;UBERON:0004119!2.06e-12!169;UBERON:0000925!2.06e-12!169;UBERON:0006595!2.06e-12!169;UBERON:0002530!3.40e-11!59;UBERON:0002365!1.30e-10!31;UBERON:0002330!1.30e-10!31;UBERON:0005256!3.34e-10!143;UBERON:0000490!8.94e-10!138;UBERON:0004921!1.17e-09!129;UBERON:0004185!1.17e-09!129;UBERON:0002368!3.64e-09!35;UBERON:0000077!1.51e-08!130;UBERON:0002367!1.53e-08!11;UBERON:0010147!1.53e-08!11;UBERON:0009846!1.53e-08!11;UBERON:0003353!1.53e-08!11;UBERON:0004902!1.53e-08!11;UBERON:0003820!1.53e-08!11;UBERON:0009847!1.53e-08!11;UBERON:0003937!8.50e-08!12;UBERON:0005399!8.50e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.89e-33;19!UBERON:0006925;6.89e-33;19!UBERON:0002423;8.54e-25;25!UBERON:0002365;4.41e-19;31!UBERON:0002330;4.41e-19;31!UBERON:0002368;2.50e-17;33!UBERON:0002530;1.30e-12;57!UBERON:0000949;2.83e-11;43!UBERON:0001155;2.12e-10;9!UBERON:0001007;7.51e-10;81!UBERON:0000160;4.68e-09;17!UBERON:0002367;7.67e-09;11!UBERON:0010147;7.67e-09;11!UBERON:0005172;1.09e-08;52!UBERON:0005173;1.09e-08;52!UBERON:0000059;1.32e-08;11!UBERON:0003937;3.81e-08;12!UBERON:0005399;3.81e-08;12!UBERON:0005409;4.02e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.75e-33,19;UBERON:0006925,6.75e-33,19;UBERON:0008836,6.75e-33,19;UBERON:0008835,2.67e-28,22;UBERON:0003894,2.67e-28,22;UBERON:0009854,4.94e-27,23;UBERON:0003929,5.12e-25,54;UBERON:0007499,8.41e-25,25;UBERON:0009497,8.41e-25,25;UBERON:0000015,8.41e-25,25;UBERON:0002423,8.41e-25,25;UBERON:0006235,8.41e-25,25;UBERON:0004161,8.41e-25,25;UBERON:0009856,8.16e-24,26;UBERON:0002365,7.84e-20,31;UBERON:0002330,7.84e-20,31;UBERON:0002530,5.44e-19,59;UBERON:0002368,1.83e-17,35;UBERON:0004921,1.15e-16,118;UBERON:0005911,7.29e-16,82;UBERON:0005256,6.38e-14,122;UBERON:0000949,2.24e-13,45;UBERON:0001007,3.74e-13,145;UBERON:0001555,3.74e-13,145;UBERON:0007026,3.74e-13,145;UBERON:0000490,6.05e-13,148;UBERON:0004119,1.04e-11,160;UBERON:0000925,1.04e-11,160;UBERON:0006595,1.04e-11,160;UBERON:0005172,5.47e-11,54;UBERON:0005173,5.47e-11,54;UBERON:0001155,1.92e-10,9;UBERON:0003104,4.32e-10,160;UBERON:0009142,4.32e-10,160;UBERON:0002417,8.57e-10,60;UBERON:0000916,8.57e-10,60;UBERON:0000160,4.39e-09,17;UBERON:0002367,7.99e-09,11;UBERON:0010147,7.99e-09,11;UBERON:0009846,7.99e-09,11;UBERON:0003353,7.99e-09,11;UBERON:0004902,7.99e-09,11;UBERON:0003820,7.99e-09,11;UBERON:0009847,7.99e-09,11;UBERON:0000059,1.22e-08,11;UBERON:0003937,3.95e-08,12;UBERON:0005399,3.95e-08,12;UBERON:0002100,1.13e-07,199;UBERON:0011216,1.32e-07,223;UBERON:0000162,4.92e-07,14;UBERON:0001353,4.92e-07,14;UBERON:0000163,4.92e-07,14;UBERON:0006866,4.92e-07,14;UBERON:0000164,4.92e-07,14;UBERON:0000931,4.92e-07,14 | |||
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| ||
|short_description=p3@COLEC10 | |||
}} | }} |
Latest revision as of 21:06, 15 September 2015
Short description: | p3@COLEC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COLEC10_5end |
Coexpression cluster: | C4721_Hepatocyte_Prostate_normal_hepatic_liver_sacrococcigeal_Mesenchymal |
Association with transcript: | -7bp_to_NM_006438, uc003yoo.2_5end |
EntrezGene: | COLEC10 |
HGNC: | 2220 |
UniProt: | Q9Y6Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 4.53e-30 | 3 |
smooth muscle cell of large intestine | 4.53e-30 | 3 |
smooth muscle cell of colon | 4.53e-30 | 3 |
hepatic stem cell | 2.55e-21 | 2 |
hepatic mesenchymal stem cell | 2.55e-21 | 2 |
prostate stromal cell | 1.98e-14 | 3 |
hepatic stellate cell | 2.59e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.06e-11 | 1 |