CL:0002622

Name:	prostate stromal cell
Namespace:	FANTOM
Definition:	"A stromal cell of the prostate." [GOC:tfm]
Xrefs:	Expandlinks: BTO:0003972
Created by:	tmeehan
Creation date:	2011-03-14T02:11:10Z

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000499(stromal cell)
part_of:	UBERON:0002367(prostate gland)

Children

derives from:	FF:0000277 (human prostate stromal cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 11254-116F3 (Prostate Stromal Cells, donor1)
• 11332-117E9 (Prostate Stromal Cells, donor2)
• 11405-118E1 (Prostate Stromal Cells, donor3)

Mouse (Mus musculus)

• 11254-116F3 (Prostate Stromal Cells, donor1)
• 11332-117E9 (Prostate Stromal Cells, donor2)
• 11405-118E1 (Prostate Stromal Cells, donor3)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002622 (prostate stromal cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
6.24e-88	FFCP PHASE2:Hg19::chr4:120437504..120437512,-	p@chr4:120437504..120437512, -
6.24e-88	FFCP PHASE1:Hg19::chr4:120437504..120437512,-	p@chr4:120437504..120437512, -
7.51e-74	FFCP PHASE2:Hg19::chr14:33088589..33088594,+	p@chr14:33088589..33088594, +
7.51e-74	FFCP PHASE1:Hg19::chr14:33088589..33088594,+	p@chr14:33088589..33088594, +
1.71e-66	FFCP PHASE1:Hg19::chr4:120546882..120546885,-	p@chr4:120546882..120546885, -
1.71e-66	FFCP PHASE2:Hg19::chr4:120546882..120546885,-	p@chr4:120546882..120546885, -
1.05e-45	FFCP PHASE2:Hg19::chr1:246147829..246147864,-	p@chr1:246147829..246147864, -
1.05e-45	FFCP PHASE1:Hg19::chr1:246147829..246147864,-	p@chr1:246147829..246147864, -
1.49e-38	FFCP PHASE2:Hg19::chr3:123518853..123518862,-	p48@MYLK
1.49e-38	FFCP PHASE1:Hg19::chr3:123518853..123518862,-	p48@MYLK
1.8e-38	FFCP PHASE2:Hg19::chr4:120549931..120549938,-	p21@PDE5A
1.8e-38	FFCP PHASE1:Hg19::chr4:120549931..120549938,-	p21@PDE5A
1.11e-35	FFCP PHASE2:Hg19::chr7:136759451..136759469,+	p@chr7:136759451..136759469, +
1.11e-35	FFCP PHASE1:Hg19::chr7:136759451..136759469,+	p@chr7:136759451..136759469, +
1.47e-30	FFCP PHASE1:Hg19::chr12:52473502..52473510,+	p2@ENST00000546390, p2@uc009zme.1
1.47e-30	FFCP PHASE2:Hg19::chr12:52473502..52473510,+	p2@ENST00000546390, p2@uc009zme.1
1.98e-30	FFCP PHASE2:Hg19::chr4:177190139..177190150,-	p6@ASB5
1.98e-30	FFCP PHASE1:Hg19::chr4:177190139..177190150,-	p6@ASB5
1.06e-27	FFCP PHASE2:Hg19::chr2:238092965..238092980,-	p@chr2:238092965..238092980, -
1.06e-27	FFCP PHASE1:Hg19::chr2:238092965..238092980,-	p@chr2:238092965..238092980, -
7.93e-25	FFCP PHASE2:Hg19::chr7:81319728..81319744,-	p@chr7:81319728..81319744, -
7.93e-25	FFCP PHASE1:Hg19::chr7:81319728..81319744,-	p@chr7:81319728..81319744, -
4.97e-24	FFCP PHASE2:Hg19::chr4:120549834..120549846,-	p15@PDE5A
4.97e-24	FFCP PHASE1:Hg19::chr4:120549834..120549846,-	p15@PDE5A
2.46e-23	FFCP PHASE2:Hg19::chr3:123518704..123518728,-	p28@MYLK
2.46e-23	FFCP PHASE1:Hg19::chr3:123518704..123518728,-	p28@MYLK
3.27e-23	FFCP PHASE2:Hg19::chr2:203560192..203560201,+	p11@FAM117B
3.27e-23	FFCP PHASE1:Hg19::chr2:203560192..203560201,+	p11@FAM117B
4.09e-23	FFCP PHASE2:Hg19::chr1:118363660..118363674,-	p@chr1:118363660..118363674, -
4.09e-23	FFCP PHASE1:Hg19::chr1:118363660..118363674,-	p@chr1:118363660..118363674, -
5.63e-23	FFCP PHASE2:Hg19::chr4:1165260..1165276,-	p17@SPON2
5.63e-23	FFCP PHASE1:Hg19::chr4:1165260..1165276,-	p17@SPON2
8.19e-23	FFCP PHASE2:Hg19::chr21:46767473..46767491,+	p@chr21:46767473..46767491, +
8.19e-23	FFCP PHASE1:Hg19::chr21:46767473..46767491,+	p@chr21:46767473..46767491, +
1.72e-22	FFCP PHASE2:Hg19::chr8:119945232..119945244,-	p8@TNFRSF11B
1.72e-22	FFCP PHASE1:Hg19::chr8:119945232..119945244,-	p8@TNFRSF11B
8.23e-22	FFCP PHASE1:Hg19::chr3:123518925..123518939,-	p29@MYLK
8.23e-22	FFCP PHASE2:Hg19::chr3:123518925..123518939,-	p29@MYLK
2.41e-21	FFCP PHASE2:Hg19::chr4:120548828..120548836,-	p17@PDE5A
2.41e-21	FFCP PHASE1:Hg19::chr4:120548828..120548836,-	p17@PDE5A
5.43e-21	FFCP PHASE2:Hg19::chr8:120079417..120079436,+	p2@COLEC10
5.43e-21	FFCP PHASE1:Hg19::chr8:120079417..120079436,+	p2@COLEC10
8.16e-21	FFCP PHASE2:Hg19::chr18:20275091..20275099,+	p@chr18:20275091..20275099, +
8.16e-21	FFCP PHASE1:Hg19::chr18:20275091..20275099,+	p@chr18:20275091..20275099, +
3.12e-20	FFCP PHASE2:Hg19::chr3:170150547..170150552,+	p@chr3:170150547..170150552, +
3.12e-20	FFCP PHASE1:Hg19::chr3:170150547..170150552,+	p@chr3:170150547..170150552, +
6.5e-20	FFCP PHASE1:Hg19::chr12:89842992..89843005,-	p@chr12:89842992..89843005, -
6.5e-20	FFCP PHASE2:Hg19::chr12:89842992..89843005,-	p@chr12:89842992..89843005, -
7.16e-20	FFCP PHASE2:Hg19::chr14:52066745..52066774,-	p2@ENST00000556617
7.16e-20	FFCP PHASE1:Hg19::chr14:52066745..52066774,-	p2@ENST00000556617
8.96e-20	FFCP PHASE1:Hg19::chr9:101832450..101832468,+	p@chr9:101832450..101832468, +
8.96e-20	FFCP PHASE2:Hg19::chr9:101832450..101832468,+	p@chr9:101832450..101832468, +
5.54e-19	FFCP PHASE2:Hg19::chr14:54418733..54418774,-	p7@BMP4
5.54e-19	FFCP PHASE1:Hg19::chr14:54418733..54418774,-	p7@BMP4
6.63e-19	FFCP PHASE2:Hg19::chr2:114300263..114300269,-	p1@ENST00000416758
6.63e-19	FFCP PHASE1:Hg19::chr2:114300263..114300269,-	p1@ENST00000416758
1.04e-18	FFCP PHASE2:Hg19::chr3:158390171..158390180,-	p3@LXN
1.04e-18	FFCP PHASE2:Hg19::chr1:21025019..21025038,-	p8@KIF17
1.04e-18	FFCP PHASE1:Hg19::chr3:158390171..158390180,-	p3@LXN
1.04e-18	FFCP PHASE1:Hg19::chr1:21025019..21025038,-	p8@KIF17
1.36e-18	FFCP PHASE2:Hg19::chr16:86547373..86547391,+	p@chr16:86547373..86547391, +
1.36e-18	FFCP PHASE1:Hg19::chr16:86547373..86547391,+	p@chr16:86547373..86547391, +
8.0e-18	FFCP PHASE2:Hg19::chr6:134210772..134210782,+	p8@TCF21
8.0e-18	FFCP PHASE1:Hg19::chr6:134210772..134210782,+	p8@TCF21
1.08e-17	FFCP PHASE1:Hg19::chr16:86229916..86229943,+	p@chr16:86229916..86229943, +
1.08e-17	FFCP PHASE2:Hg19::chr16:86229916..86229943,+	p@chr16:86229916..86229943, +
1.6e-17	FFCP PHASE2:Hg19::chr9:101706279..101706284,+	p13@COL15A1
1.6e-17	FFCP PHASE1:Hg19::chr9:101706279..101706284,+	p13@COL15A1
1.7e-17	FFCP PHASE2:Hg19::chr6:64517213..64517228,+	p@chr6:64517213..64517228, +
1.7e-17	FFCP PHASE1:Hg19::chr6:64517213..64517228,+	p@chr6:64517213..64517228, +
1.79e-17	FFCP PHASE2:Hg19::chr4:1165106..1165131,-	p15@SPON2
1.79e-17	FFCP PHASE1:Hg19::chr4:1165106..1165131,-	p15@SPON2
3.03e-17	FFCP PHASE2:Hg19::chr8:120079478..120079499,+	p1@COLEC10
3.03e-17	FFCP PHASE1:Hg19::chr8:120079478..120079499,+	p1@COLEC10
3.48e-17	FFCP PHASE2:Hg19::chr3:123518900..123518913,-	p18@MYLK
3.48e-17	FFCP PHASE1:Hg19::chr3:123518900..123518913,-	p18@MYLK
5.22e-17	FFCP PHASE2:Hg19::chr10:28033614..28033628,-	p@chr10:28033614..28033628, -
5.22e-17	FFCP PHASE1:Hg19::chr10:28033614..28033628,-	p@chr10:28033614..28033628, -
1.23e-16	FFCP PHASE2:Hg19::chr3:123458560..123458569,-	p@chr3:123458560..123458569, -
1.23e-16	FFCP PHASE1:Hg19::chr3:123458560..123458569,-	p@chr3:123458560..123458569, -
1.97e-16	FFCP PHASE2:Hg19::chr3:123519062..123519090,-	p14@MYLK
1.97e-16	FFCP PHASE1:Hg19::chr3:123519062..123519090,-	p14@MYLK
2.26e-16	FFCP PHASE2:Hg19::chr1:21766691..21766715,+	p3@NBPF3
2.26e-16	FFCP PHASE1:Hg19::chr1:21766691..21766715,+	p3@NBPF3
2.82e-16	FFCP PHASE2:Hg19::chr16:86256667..86256687,-	p@chr16:86256667..86256687, -
2.82e-16	FFCP PHASE1:Hg19::chr16:86256667..86256687,-	p@chr16:86256667..86256687, -
3.98e-16	FFCP PHASE2:Hg19::chr4:1164305..1164316,-	p@chr4:1164305..1164316, -
3.98e-16	FFCP PHASE1:Hg19::chr4:1164305..1164316,-	p@chr4:1164305..1164316, -
4.02e-16	FFCP PHASE2:Hg19::chr4:1165755..1165774,-	p12@SPON2
4.02e-16	FFCP PHASE1:Hg19::chr4:1165755..1165774,-	p12@SPON2
5.17e-16	FFCP PHASE2:Hg19::chr2:28524175..28524215,+	p@chr2:28524175..28524215, +
5.17e-16	FFCP PHASE1:Hg19::chr2:28524175..28524215,+	p@chr2:28524175..28524215, +
6.63e-16	FFCP PHASE1:Hg19::chr16:86542381..86542392,-	p1@ENST00000499071
6.63e-16	FFCP PHASE2:Hg19::chr16:86542381..86542392,-	p1@ENST00000499071
1.22e-15	FFCP PHASE2:Hg19::chr7:136553573..136553582,+	p6@CHRM2
1.22e-15	FFCP PHASE1:Hg19::chr7:136553573..136553582,+	p6@CHRM2
2.63e-15	FFCP PHASE2:Hg19::chr7:79082186..79082203,+	p8@MAGI2-AS3
2.63e-15	FFCP PHASE1:Hg19::chr7:79082186..79082203,+	p8@MAGI2-AS3
3.11e-15	FFCP PHASE1:Hg19::chr3:123518799..123518836,-	p16@MYLK
3.11e-15	FFCP PHASE2:Hg19::chr3:123518799..123518836,-	p16@MYLK

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