FFCP PHASE1:Hg19::chr17:46692457..46692484,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3218 | |EntrezGene=3218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5119 | |HGNC=5119 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468443_5end | |association_with_transcript=0bp_to_ENST00000468443_5end | ||
|cluster_id=chr17:46692457..46692484,- | |||
|coexpression_cluster_id=C1783 | |coexpression_cluster_id=C1783 | ||
|description=CAGE_peak_2_at_HOXB8_5end | |description=CAGE_peak_2_at_HOXB8_5end | ||
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|ontology_enrichment_celltype=CL:1000449!6.47e-15!16;CL:1000497!1.09e-14!18;CL:0002518!1.09e-14!18;CL:1000507!2.14e-13!12;CL:1000494!2.14e-13!12;CL:0002681!2.41e-11!13;CL:0002584!2.41e-11!13;CL:0002334!9.08e-07!12 | |ontology_enrichment_celltype=CL:1000449!6.47e-15!16;CL:1000497!1.09e-14!18;CL:0002518!1.09e-14!18;CL:1000507!2.14e-13!12;CL:1000494!2.14e-13!12;CL:0002681!2.41e-11!13;CL:0002584!2.41e-11!13;CL:0002334!9.08e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.56e-26;15!CL:1000507;2.40e-24;10!CL:1000494;2.40e-24;10!CL:1000497;7.96e-23;17!CL:0002518;7.96e-23;17!CL:0002681;1.52e-19;12!CL:0002584;1.52e-19;12!CL:1000746;7.97e-09;7!CL:1000612;7.97e-09;7!CL:0000239;9.80e-09;3!CL:1000615;9.80e-09;3!CL:0002306;9.80e-09;3!CL:0002615;1.33e-07;3!CL:0002579;1.66e-07;3 | |ontology_enrichment_celltype_v019=CL:1000449;2.56e-26;15!CL:1000507;2.40e-24;10!CL:1000494;2.40e-24;10!CL:1000497;7.96e-23;17!CL:0002518;7.96e-23;17!CL:0002681;1.52e-19;12!CL:0002584;1.52e-19;12!CL:1000746;7.97e-09;7!CL:1000612;7.97e-09;7!CL:0000239;9.80e-09;3!CL:1000615;9.80e-09;3!CL:0002306;9.80e-09;3!CL:0002615;1.33e-07;3!CL:0002579;1.66e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.99e-26,15;CL:1000507,2.38e-24,10;CL:1000494,2.38e-24,10;CL:1000497,9.11e-23,17;CL:0002518,9.11e-23,17;CL:0002681,1.73e-19,12;CL:0002584,1.73e-19,12;CL:1000746,9.79e-09,7;CL:1000612,9.79e-09,7;CL:0000239,9.81e-09,3;CL:1000615,9.81e-09,3;CL:0002306,9.81e-09,3;CL:0002615,1.16e-07,3;CL:0002579,2.01e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.65e-09;3!UBERON:0003057;2.65e-09;3!UBERON:0007297;6.62e-07;2 | |ontology_enrichment_development_v019=UBERON:0006241;2.65e-09;3!UBERON:0003057;2.65e-09;3!UBERON:0007297;6.62e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!5.77e-22!32;UBERON:0000080!1.38e-17!18;UBERON:0002120!1.38e-17!18;UBERON:0004875!1.38e-17!18;UBERON:0005721!1.38e-17!18;UBERON:0005754!1.38e-17!18;UBERON:0007297!1.38e-17!18;UBERON:0003886!1.89e-16!63;UBERON:0002113!2.08e-16!27;UBERON:0003918!2.08e-16!27;UBERON:0005095!2.08e-16!27;UBERON:0007687!2.08e-16!27;UBERON:0006555!3.07e-16!17;UBERON:0005103!3.07e-16!17;UBERON:0000083!3.07e-16!17;UBERON:0009201!3.07e-16!17;UBERON:0004819!3.07e-16!17;UBERON:0006553!3.07e-16!17;UBERON:0003074!3.07e-16!17;UBERON:0003060!3.07e-16!17;UBERON:0003887!8.13e-16!21;UBERON:0004876!2.84e-15!20;UBERON:0004211!6.47e-15!16;UBERON:0001285!6.47e-15!16;UBERON:0007684!6.47e-15!16;UBERON:0003220!6.47e-15!16;UBERON:0004208!6.47e-15!16;UBERON:0000058!3.68e-14!26;UBERON:0002417!4.32e-14!61;UBERON:0000916!4.32e-14!61;UBERON:0002553!1.10e-13!70;UBERON:0001008!1.40e-13!45;UBERON:0009773!2.14e-13!12;UBERON:0001231!2.14e-13!12;UBERON:0004810!2.14e-13!12;UBERON:0006554!9.19e-13!44;UBERON:0001225!2.41e-11!13;UBERON:0008987!2.41e-11!13;UBERON:0003064!3.61e-11!37;UBERON:0005177!4.33e-11!107;UBERON:0000464!1.61e-10!104;UBERON:0005172!7.85e-10!55;UBERON:0005173!7.85e-10!55;UBERON:0000353!1.96e-09!17;UBERON:0009569!2.74e-09!113;UBERON:0000466!3.66e-09!126;UBERON:0002100!8.52e-09!216;UBERON:0001851!1.28e-08!16;UBERON:0003688!6.86e-08!6;UBERON:0002358!6.86e-08!6;UBERON:0003684!6.86e-08!6;UBERON:0001178!6.86e-08!6;UBERON:0005174!1.11e-07!5;UBERON:0001137!1.11e-07!5;UBERON:0003586!4.01e-07!5 | |ontology_enrichment_uberon=UBERON:0000489!5.77e-22!32;UBERON:0000080!1.38e-17!18;UBERON:0002120!1.38e-17!18;UBERON:0004875!1.38e-17!18;UBERON:0005721!1.38e-17!18;UBERON:0005754!1.38e-17!18;UBERON:0007297!1.38e-17!18;UBERON:0003886!1.89e-16!63;UBERON:0002113!2.08e-16!27;UBERON:0003918!2.08e-16!27;UBERON:0005095!2.08e-16!27;UBERON:0007687!2.08e-16!27;UBERON:0006555!3.07e-16!17;UBERON:0005103!3.07e-16!17;UBERON:0000083!3.07e-16!17;UBERON:0009201!3.07e-16!17;UBERON:0004819!3.07e-16!17;UBERON:0006553!3.07e-16!17;UBERON:0003074!3.07e-16!17;UBERON:0003060!3.07e-16!17;UBERON:0003887!8.13e-16!21;UBERON:0004876!2.84e-15!20;UBERON:0004211!6.47e-15!16;UBERON:0001285!6.47e-15!16;UBERON:0007684!6.47e-15!16;UBERON:0003220!6.47e-15!16;UBERON:0004208!6.47e-15!16;UBERON:0000058!3.68e-14!26;UBERON:0002417!4.32e-14!61;UBERON:0000916!4.32e-14!61;UBERON:0002553!1.10e-13!70;UBERON:0001008!1.40e-13!45;UBERON:0009773!2.14e-13!12;UBERON:0001231!2.14e-13!12;UBERON:0004810!2.14e-13!12;UBERON:0006554!9.19e-13!44;UBERON:0001225!2.41e-11!13;UBERON:0008987!2.41e-11!13;UBERON:0003064!3.61e-11!37;UBERON:0005177!4.33e-11!107;UBERON:0000464!1.61e-10!104;UBERON:0005172!7.85e-10!55;UBERON:0005173!7.85e-10!55;UBERON:0000353!1.96e-09!17;UBERON:0009569!2.74e-09!113;UBERON:0000466!3.66e-09!126;UBERON:0002100!8.52e-09!216;UBERON:0001851!1.28e-08!16;UBERON:0003688!6.86e-08!6;UBERON:0002358!6.86e-08!6;UBERON:0003684!6.86e-08!6;UBERON:0001178!6.86e-08!6;UBERON:0005174!1.11e-07!5;UBERON:0001137!1.11e-07!5;UBERON:0003586!4.01e-07!5 | ||
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| ||
|short_description=p2@HOXB8 | |short_description=p2@HOXB8 | ||
}} | }} |
Latest revision as of 07:35, 25 September 2015
Short description: | p2@HOXB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXB8_5end |
Coexpression cluster: | C1783_alveolar_nonsmall_ductus_spinal_seminal_epididymis_somatostatinoma |
Association with transcript: | 0bp_to_ENST00000468443_5end |
EntrezGene: | HOXB8 |
HGNC: | 5119 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.99e-26 | 15 |
kidney tubule cell | 2.38e-24 | 10 |
nephron tubule epithelial cell | 2.38e-24 | 10 |
kidney cell | 9.11e-23 | 17 |
kidney epithelial cell | 9.11e-23 | 17 |
kidney cortical cell | 1.73e-19 | 12 |
renal cortical epithelial cell | 1.73e-19 | 12 |
glomerular cell | 9.79e-09 | 7 |
kidney corpuscule cell | 9.79e-09 | 7 |
brush border epithelial cell | 9.81e-09 | 3 |
kidney cortex tubule cell | 9.81e-09 | 3 |
epithelial cell of proximal tubule | 9.81e-09 | 3 |
adipocyte of omentum tissue | 1.16e-07 | 3 |
omentum preadipocyte | 2.01e-07 | 3 |