FFCP PHASE1:Hg19::chr19:17375527..17375538,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83878 | |EntrezGene=83878 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24058 | |HGNC=24058 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N8Y1 | |UniProt=Q8N8Y1 | ||
|association_with_transcript=0bp_to_ENST00000324554,ENST00000431146_5end | |association_with_transcript=0bp_to_ENST00000324554,ENST00000431146_5end | ||
|cluster_id=chr19:17375527..17375538,- | |||
|coexpression_cluster_id=C1765 | |coexpression_cluster_id=C1765 | ||
|description=CAGE_peak_2_at_USHBP1_5end | |description=CAGE_peak_2_at_USHBP1_5end | ||
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|ontology_enrichment_celltype=CL:0000115!8.53e-26!35;CL:0002139!3.66e-25!24;CL:0002078!1.01e-18!44;CL:0000071!9.27e-17!18;CL:0002546!9.27e-17!18;CL:0000213!1.43e-12!57;CL:0000215!1.43e-12!57;CL:0005020!2.48e-10!6;CL:0002138!2.48e-10!6;CL:0005022!2.48e-10!6;CL:1000413!3.37e-07!9;CL:0002543!7.96e-07!6 | |ontology_enrichment_celltype=CL:0000115!8.53e-26!35;CL:0002139!3.66e-25!24;CL:0002078!1.01e-18!44;CL:0000071!9.27e-17!18;CL:0002546!9.27e-17!18;CL:0000213!1.43e-12!57;CL:0000215!1.43e-12!57;CL:0005020!2.48e-10!6;CL:0002138!2.48e-10!6;CL:0005022!2.48e-10!6;CL:1000413!3.37e-07!9;CL:0002543!7.96e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.23e-25;36!CL:0002188;1.10e-18;5!CL:0002144;4.70e-18;3!CL:0002139;1.11e-17;24!CL:0002078;2.75e-17;45!CL:1000746;2.17e-13;7!CL:1000612;2.17e-13;7!CL:0000213;8.49e-13;58!CL:0000215;8.49e-13;58!CL:0002262;1.48e-12;2!CL:1000398;1.48e-12;2!CL:0000071;8.58e-11;18!CL:0002138;3.22e-09;6!CL:0002681;7.58e-08;12!CL:0002584;7.58e-08;12 | |ontology_enrichment_celltype_v019=CL:0000115;1.23e-25;36!CL:0002188;1.10e-18;5!CL:0002144;4.70e-18;3!CL:0002139;1.11e-17;24!CL:0002078;2.75e-17;45!CL:1000746;2.17e-13;7!CL:1000612;2.17e-13;7!CL:0000213;8.49e-13;58!CL:0000215;8.49e-13;58!CL:0002262;1.48e-12;2!CL:1000398;1.48e-12;2!CL:0000071;8.58e-11;18!CL:0002138;3.22e-09;6!CL:0002681;7.58e-08;12!CL:0002584;7.58e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.34e-33,36;CL:0002078,1.48e-25,45;CL:0000213,4.19e-19,58;CL:0000215,4.19e-19,58;CL:0002188,5.02e-19,5;CL:0002144,3.08e-18,3;CL:0002139,8.31e-18,24;CL:1000746,1.25e-13,7;CL:1000612,1.25e-13,7;CL:0002262,1.33e-12,2;CL:1000398,1.33e-12,2;CL:0000071,8.11e-11,18;CL:0002546,8.11e-11,18;CL:0005020,2.38e-09,6;CL:0002138,2.38e-09,6;CL:0005022,2.38e-09,6;CL:0002681,5.54e-08,12;CL:0002584,5.54e-08,12;CL:0000222,1.59e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;8.58e-11;18!CL:0005022;3.22e-09;6!UBERON:0004872;1.20e-07;7!UBERON:0004140;7.55e-07;1!UBERON:0004874;7.55e-07;1 | |ontology_enrichment_development_v019=CL:0002546;8.58e-11;18!CL:0005022;3.22e-09;6!UBERON:0004872;1.20e-07;7!UBERON:0004140;7.55e-07;1!UBERON:0004874;7.55e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@USHBP1 | |short_description=p2@USHBP1 | ||
}} | }} |
Latest revision as of 11:17, 16 September 2015
Short description: | p2@USHBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USHBP1_5end |
Coexpression cluster: | C1765_Renal_Hepatic_Endothelial_placenta_Lymphatic_breast_lung |
Association with transcript: | 0bp_to_ENST00000324554, ENST00000431146_5end |
EntrezGene: | USHBP1 |
HGNC: | 24058 |
UniProt: | Q8N8Y1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.34e-33 | 36 |
meso-epithelial cell | 1.48e-25 | 45 |
lining cell | 4.19e-19 | 58 |
barrier cell | 4.19e-19 | 58 |
glomerular endothelial cell | 5.02e-19 | 5 |
capillary endothelial cell | 3.08e-18 | 3 |
endothelial cell of vascular tree | 8.31e-18 | 24 |
glomerular cell | 1.25e-13 | 7 |
kidney corpuscule cell | 1.25e-13 | 7 |
endothelial cell of sinusoid | 1.33e-12 | 2 |
endothelial cell of hepatic sinusoid | 1.33e-12 | 2 |
blood vessel endothelial cell | 8.11e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.11e-11 | 18 |
lymphangioblast | 2.38e-09 | 6 |
endothelial cell of lymphatic vessel | 2.38e-09 | 6 |
vascular lymphangioblast | 2.38e-09 | 6 |
kidney cortical cell | 5.54e-08 | 12 |
renal cortical epithelial cell | 5.54e-08 | 12 |
mesodermal cell | 1.59e-07 | 121 |