FFCP PHASE1:Hg19::chr19:50390837..50390847,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:50390837..50390847,+ | |||
|description=CAGE_peak_at_chr19:50390837..50390847,+ | |description=CAGE_peak_at_chr19:50390837..50390847,+ | ||
|id=chr19:50390837..50390847,+ | |id=chr19:50390837..50390847,+ | ||
|ontology_enrichment_celltype=CL:1000449!1.86e-13!16;CL:0005020!4.23e-12!6;CL:0002138!4.23e-12!6;CL:0005022!4.23e-12!6;CL:1000497!7.57e-12!18;CL:0002518!7.57e-12!18;CL:1000507!1.08e-09!12;CL:1000494!1.08e-09!12;CL:0002681!7.97e-09!13;CL:0002584!7.97e-09!13 | |ontology_enrichment_celltype=CL:1000449!1.86e-13!16;CL:0005020!4.23e-12!6;CL:0002138!4.23e-12!6;CL:0005022!4.23e-12!6;CL:1000497!7.57e-12!18;CL:0002518!7.57e-12!18;CL:1000507!1.08e-09!12;CL:1000494!1.08e-09!12;CL:0002681!7.97e-09!13;CL:0002584!7.97e-09!13 | ||
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|ontology_enrichment_celltype_v019_2=CL:0002681,1.06e-29,12;CL:0002584,1.06e-29,12;CL:1000449,7.08e-24,15;CL:0002553,1.34e-23,1;CL:0000167,6.40e-23,1;CL:0000164,6.40e-23,1;CL:0000502,6.40e-23,1;CL:0000172,6.40e-23,1;CL:0000173,6.40e-23,1;CL:0002351,6.40e-23,1;CL:1000497,3.93e-21,17;CL:0002518,3.93e-21,17;CL:1000507,1.47e-20,10;CL:1000494,1.47e-20,10;CL:1000746,1.58e-13,7;CL:1000612,1.58e-13,7;CL:0000650,2.32e-12,2;CL:1000500,2.32e-12,2;CL:1000618,2.32e-12,2;CL:1001318,2.32e-12,2;CL:0002173,2.32e-12,2;CL:0002535,3.24e-12,2;CL:0000669,8.14e-07,4;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002351;4.10e-23;1 | |ontology_enrichment_development_v019=CL:0002351;4.10e-23;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;4.10e-23;1!DOID:4468;2.90e-12;2 | |ontology_enrichment_disease_v019=DOID:4430;4.10e-23;1!DOID:4468;2.90e-12;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,6.40e-23,1;DOID:4468,2.59e-12,2 | |||
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|short_description=p@chr19:50390837..50390847,+ | |short_description=p@chr19:50390837..50390847,+ | ||
}} | }} |
Latest revision as of 16:17, 27 July 2015
Short description: | p@chr19:50390837..50390847, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:50390837..50390847, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cortical cell | 1.06e-29 | 12 |
renal cortical epithelial cell | 1.06e-29 | 12 |
epithelial cell of nephron | 7.08e-24 | 15 |
lung fibroblast | 1.34e-23 | 1 |
peptide hormone secreting cell | 6.40e-23 | 1 |
enteroendocrine cell | 6.40e-23 | 1 |
type D enteroendocrine cell | 6.40e-23 | 1 |
somatostatin secreting cell | 6.40e-23 | 1 |
pancreatic D cell | 6.40e-23 | 1 |
progenitor cell of endocrine pancreas | 6.40e-23 | 1 |
kidney cell | 3.93e-21 | 17 |
kidney epithelial cell | 3.93e-21 | 17 |
kidney tubule cell | 1.47e-20 | 10 |
nephron tubule epithelial cell | 1.47e-20 | 10 |
glomerular cell | 1.58e-13 | 7 |
kidney corpuscule cell | 1.58e-13 | 7 |
mesangial cell | 2.32e-12 | 2 |
kidney interstitial cell | 2.32e-12 | 2 |
juxtaglomerular complex cell | 2.32e-12 | 2 |
renal interstitial pericyte | 2.32e-12 | 2 |
extraglomerular mesangial cell | 2.32e-12 | 2 |
epithelial cell of cervix | 3.24e-12 | 2 |
pericyte cell | 8.14e-07 | 4 |
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.40e-23 | 1 |
clear cell adenocarcinoma | 2.59e-12 | 2 |