CL:0002535

Name:	epithelial cell of cervix
Namespace:	FANTOM
Definition:	"An epithelial cell of the cervix." [GOC:tfm]
Synonyms:	"cervical canal epithelial cell" EXACT [GOC:tfm] "cervical canal of uterus epithelial cell" EXACT [GOC:tfm] "cervix epithelial cell" EXACT [GOC:tfm] "cervix of uterus epithelial cell" EXACT [GOC:tfm] "epithelial cell of cervical canal" EXACT [GOC:tfm] "epithelial cell of cervical canal of uterus" EXACT [GOC:tfm] "epithelial cell of cervix of uterus" EXACT [GOC:tfm] "epithelial cell of neck of uterus" EXACT [GOC:tfm] "epithelial cell of uterine cervix" EXACT [GOC:tfm] "neck of uterus epithelial cell" EXACT [GOC:tfm] "uterine cervix epithelial cell" EXACT [GOC:tfm]
Created by:	tmeehan
Creation date:	2011-02-24T08:20:08Z

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000066(epithelial cell),CL:0002371(somatic cell)
part_of:	UBERON:0000002(uterine cervix),UBERON:0004801(cervix epithelium)

Children

is a:	FF:10431-106D8 (epidermoid carcinoma cell line:Ca Ski),FF:10589-108D4 (argyrophil small cell carcinoma cell line:TC-YIK)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
• 10589-108D4 (argyrophil small cell carcinoma cell line:TC-YIK)

Mouse (Mus musculus)

• 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
• 10589-108D4 (argyrophil small cell carcinoma cell line:TC-YIK)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002535 (epithelial cell of cervix), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
8.99e-131	FFCP PHASE2:Hg19::chr14:104394868..104394874,+	p5@TDRD9
8.99e-131	FFCP PHASE1:Hg19::chr14:104394868..104394874,+	p5@TDRD9
5.68e-99	FFCP PHASE1:Hg19::chr17:34838949..34838959,-	p@chr17:34838949..34838959, -
5.68e-99	FFCP PHASE2:Hg19::chr17:34838949..34838959,-	p@chr17:34838949..34838959, -
1.55e-98	FFCP PHASE2:Hg19::chr6:49467576..49467583,+	p5@GLYATL3
1.55e-98	FFCP PHASE2:Hg19::chr8:41485037..41485047,-	p@chr8:41485037..41485047, -
1.55e-98	FFCP PHASE2:Hg19::chr17:32314322..32314327,-	p@chr17:32314322..32314327, -
1.55e-98	FFCP PHASE1:Hg19::chr20:20392704..20392711,-	p@chr20:20392704..20392711, -
1.55e-98	FFCP PHASE1:Hg19::chr22:44377129..44377137,+	p@chr22:44377129..44377137, +
1.55e-98	FFCP PHASE2:Hg19::chr6:39290815..39290820,-	p6@KCNK16
1.55e-98	FFCP PHASE1:Hg19::chr6:49467646..49467657,+	p1@GLYATL3
1.55e-98	FFCP PHASE1:Hg19::chr8:41485201..41485208,-	p@chr8:41485201..41485208, -
1.55e-98	FFCP PHASE1:Hg19::chr1:70826186..70826193,-	p4@ENST00000413943
1.55e-98	FFCP PHASE1:Hg19::chr14:23465559..23465575,-	p@chr14:23465559..23465575, -
1.55e-98	FFCP PHASE2:Hg19::chr3:55205086..55205090,-	p@chr3:55205086..55205090, -
1.55e-98	FFCP PHASE1:Hg19::chr17:27892902..27892907,+	p@chr17:27892902..27892907, +
1.55e-98	FFCP PHASE2:Hg19::chr8:121054330..121054333,-	p@chr8:121054330..121054333, -
1.55e-98	FFCP PHASE2:Hg19::chr19:16838056..16838070,+	p@chr19:16838056..16838070, +
1.55e-98	FFCP PHASE1:Hg19::chr20:21918433..21918444,+	p@chr20:21918433..21918444, +
1.55e-98	FFCP PHASE1:Hg19::chr2:182548440..182548448,-	p@chr2:182548440..182548448, -
1.55e-98	FFCP PHASE2:Hg19::chr8:41508303..41508308,-	p2@NKX6-3
1.55e-98	FFCP PHASE2:Hg19::chr12:131117116..131117123,-	p@chr12:131117116..131117123, -
1.55e-98	FFCP PHASE1:Hg19::chr8:121056349..121056360,-	p@chr8:121056349..121056360, -
1.55e-98	FFCP PHASE2:Hg19::chr20:21918392..21918404,+	p@chr20:21918392..21918404, +
1.55e-98	FFCP PHASE2:Hg19::chr11:2436040..2436051,-	p@chr11:2436040..2436051, -
1.55e-98	FFCP PHASE1:Hg19::chr5:40984132..40984133,+	p@chr5:40984132..40984133, +
1.55e-98	FFCP PHASE1:Hg19::chr20:43726566..43726571,+	p@chr20:43726566..43726571, +
1.55e-98	FFCP PHASE2:Hg19::chr17:27892945..27892952,+	p@chr17:27892945..27892952, +
1.55e-98	FFCP PHASE1:Hg19::chr2:9059355..9059366,-	p@chr2:9059355..9059366, -
1.55e-98	FFCP PHASE2:Hg19::chr19:7184828..7184838,-	p@chr19:7184828..7184838, -
1.55e-98	FFCP PHASE1:Hg19::chr9:35237473..35237478,+	p@chr9:35237473..35237478, +
1.55e-98	FFCP PHASE1:Hg19::chr8:41484957..41484961,-	p@chr8:41484957..41484961, -
1.55e-98	FFCP PHASE2:Hg19::chr8:121062548..121062551,-	p@chr8:121062548..121062551, -
1.55e-98	FFCP PHASE1:Hg19::chr6:39290499..39290502,-	p8@KCNK16
1.55e-98	FFCP PHASE1:Hg19::chr12:131117116..131117123,-	p@chr12:131117116..131117123, -
1.55e-98	FFCP PHASE1:Hg19::chr8:22001308..22001310,-	p@chr8:22001308..22001310, -
1.55e-98	FFCP PHASE1:Hg19::chr1:54417667..54417685,+	p9@LRRC42
1.55e-98	FFCP PHASE1:Hg19::chr17:26911596..26911605,-	p8@SPAG5
1.55e-98	FFCP PHASE1:Hg19::chr11:2436040..2436051,-	p@chr11:2436040..2436051, -
1.55e-98	FFCP PHASE2:Hg19::chr17:39755914..39755961,-	p@chr17:39755914..39755961, -
1.55e-98	FFCP PHASE1:Hg19::chr18:74350663..74350688,-	p@chr18:74350663..74350688, -
1.55e-98	FFCP PHASE1:Hg19::chr20:43727212..43727217,-	p@chr20:43727212..43727217, -
1.55e-98	FFCP PHASE2:Hg19::chr6:49467630..49467640,+	p3@GLYATL3
1.55e-98	FFCP PHASE2:Hg19::chr8:41485173..41485181,-	p@chr8:41485173..41485181, -
1.55e-98	FFCP PHASE2:Hg19::chr17:32314379..32314387,-	p@chr17:32314379..32314387, -
1.55e-98	FFCP PHASE2:Hg19::chr7:127258120..127258138,-	p3@PAX4
1.55e-98	FFCP PHASE2:Hg19::chr11:2428348..2428358,-	p@chr11:2428348..2428358, -
1.55e-98	FFCP PHASE1:Hg19::chr6:49467678..49467693,+	p2@GLYATL3
1.55e-98	FFCP PHASE1:Hg19::chr9:91077381..91077392,+	p@chr9:91077381..91077392, +
1.55e-98	FFCP PHASE1:Hg19::chr8:41485217..41485222,-	p@chr8:41485217..41485222, -
1.55e-98	FFCP PHASE2:Hg19::chr6:20705180..20705181,+	p@chr6:20705180..20705181, +
1.55e-98	FFCP PHASE2:Hg19::chr20:20392704..20392711,-	p@chr20:20392704..20392711, -
1.55e-98	FFCP PHASE1:Hg19::chr17:27892922..27892925,+	p@chr17:27892922..27892925, +
1.55e-98	FFCP PHASE1:Hg19::chr22:32555214..32555221,-	p2@C22orf42
1.55e-98	FFCP PHASE1:Hg19::chr12:14849447..14849450,-	p7@GUCY2C
1.55e-98	FFCP PHASE2:Hg19::chr8:121056304..121056311,-	p@chr8:121056304..121056311, -
1.55e-98	FFCP PHASE1:Hg19::chr20:21918450..21918454,+	p@chr20:21918450..21918454, +
1.55e-98	FFCP PHASE1:Hg19::chr17:79225428..79225433,-	p@chr17:79225428..79225433, -
1.55e-98	FFCP PHASE2:Hg19::chr14:93389079..93389083,+	p24@CHGA
1.55e-98	FFCP PHASE1:Hg19::chr11:2428348..2428358,-	p@chr11:2428348..2428358, -
1.55e-98	FFCP PHASE1:Hg19::chr2:182548451..182548457,-	p@chr2:182548451..182548457, -
1.55e-98	FFCP PHASE2:Hg19::chr6:129597668..129597672,+	p@chr6:129597668..129597672, +
1.55e-98	FFCP PHASE2:Hg19::chr12:131117129..131117135,-	p@chr12:131117129..131117135, -
1.55e-98	FFCP PHASE1:Hg19::chr8:121056549..121056554,-	p@chr8:121056549..121056554, -
1.55e-98	FFCP PHASE2:Hg19::chr20:21918433..21918444,+	p@chr20:21918433..21918444, +
1.55e-98	FFCP PHASE2:Hg19::chr11:2436082..2436085,-	p@chr11:2436082..2436085, -
1.55e-98	FFCP PHASE2:Hg19::chr9:35237460..35237466,+	p@chr9:35237460..35237466, +
1.55e-98	FFCP PHASE2:Hg19::chr8:33464773..33464782,+	p@chr8:33464773..33464782, +
1.55e-98	FFCP PHASE2:Hg19::chr4:22737597..22737604,+	p@chr4:22737597..22737604, +
1.55e-98	FFCP PHASE2:Hg19::chr5:40984132..40984133,+	p@chr5:40984132..40984133, +
1.55e-98	FFCP PHASE2:Hg19::chr20:43726566..43726571,+	p@chr20:43726566..43726571, +
1.55e-98	FFCP PHASE1:Hg19::chr2:9059377..9059382,-	p@chr2:9059377..9059382, -
1.55e-98	FFCP PHASE1:Hg19::chr8:41485005..41485017,-	p@chr8:41485005..41485017, -
1.55e-98	FFCP PHASE1:Hg19::chr17:32314322..32314327,-	p@chr17:32314322..32314327, -
1.55e-98	FFCP PHASE2:Hg19::chr8:121066549..121066554,-	p@chr8:121066549..121066554, -
1.55e-98	FFCP PHASE2:Hg19::chr3:4810204..4810210,+	p34@ITPR1
1.55e-98	FFCP PHASE2:Hg19::chr2:9059355..9059366,-	p@chr2:9059355..9059366, -
1.55e-98	FFCP PHASE1:Hg19::chr12:131117129..131117135,-	p@chr12:131117129..131117135, -
1.55e-98	FFCP PHASE1:Hg19::chr11:2436082..2436085,-	p@chr11:2436082..2436085, -
1.55e-98	FFCP PHASE1:Hg19::chr7:127258190..127258201,-	p2@PAX4
1.55e-98	FFCP PHASE2:Hg19::chr12:14849414..14849417,-	p8@GUCY2C
1.55e-98	FFCP PHASE1:Hg19::chr5:170105957..170105992,-	p@chr5:170105957..170105992, -
1.55e-98	FFCP PHASE2:Hg19::chr22:44377129..44377137,+	p@chr22:44377129..44377137, +
1.55e-98	FFCP PHASE2:Hg19::chr6:49467646..49467657,+	p1@GLYATL3
1.55e-98	FFCP PHASE2:Hg19::chr17:26911586..26911592,-	p9@SPAG5
1.55e-98	FFCP PHASE1:Hg19::chr2:182546258..182546267,+	p@chr2:182546258..182546267, +
1.55e-98	FFCP PHASE2:Hg19::chr8:41485201..41485208,-	p@chr8:41485201..41485208, -
1.55e-98	FFCP PHASE2:Hg19::chr1:70826186..70826193,-	p4@ENST00000413943
1.55e-98	FFCP PHASE1:Hg19::chr21:47588743..47588750,-	p9@C21orf56
1.55e-98	FFCP PHASE1:Hg19::chr1:207193762..207193766,+	p@chr1:207193762..207193766, +
1.55e-98	FFCP PHASE2:Hg19::chr20:43727212..43727217,-	p@chr20:43727212..43727217, -
1.55e-98	FFCP PHASE1:Hg19::chr6:49467718..49467724,+	p4@GLYATL3
1.55e-98	FFCP PHASE1:Hg19::chr19:7184762..7184771,-	p@chr19:7184762..7184771, -
1.55e-98	FFCP PHASE1:Hg19::chr8:41486855..41486866,-	p@chr8:41486855..41486866, -
1.55e-98	FFCP PHASE1:Hg19::chr12:14849414..14849417,-	p8@GUCY2C
1.55e-98	FFCP PHASE1:Hg19::chr17:27892945..27892952,+	p@chr17:27892945..27892952, +
1.55e-98	FFCP PHASE2:Hg19::chr2:182548440..182548448,-	p@chr2:182548440..182548448, -
1.55e-98	FFCP PHASE1:Hg19::chr7:150871938..150871949,-	p3@GBX1
1.55e-98	FFCP PHASE1:Hg19::chr6:25661559..25661563,+	p@chr6:25661559..25661563, +
1.55e-98	FFCP PHASE2:Hg19::chr8:121056349..121056360,-	p@chr8:121056349..121056360, -

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