FFCP PHASE1:Hg19::chr17:68071458..68071481,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:68071458..68071481,+
|short_description=p1@KCNJ16
|description=CAGE_peak_1_at_KCNJ16_5end
|association_with_transcript=32bp_to_ENST00000283936,ENST0000039...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3773 | |EntrezGene=3773 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6262 | |HGNC=6262 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPI9 | |UniProt=Q9NPI9 | ||
|association_with_transcript=32bp_to_ENST00000283936,ENST00000392671,NM_018658,NM_170741,uc002jin.2,uc002jio.2_5end | |||
|cluster_id=chr17:68071458..68071481,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_KCNJ16_5end | |||
|id=chr17:68071458..68071481,+ | |||
|ontology_enrichment_celltype=CL:1000497!1.14e-18!18;CL:0002518!1.14e-18!18;CL:1000507!1.50e-17!12;CL:1000494!1.50e-17!12;CL:1000449!3.19e-15!16;CL:0002681!4.12e-10!13;CL:0002584!4.12e-10!13;CL:0000239!1.16e-07!3;CL:1000615!1.16e-07!3;CL:0002541!1.16e-07!3;CL:0002306!1.16e-07!3;CL:0002322!9.29e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.39e-33;10!CL:1000494;3.39e-33;10!CL:1000497;1.52e-31;17!CL:0002518;1.52e-31;17!CL:1000449;7.54e-26;15!CL:0002681;2.31e-17;12!CL:0002584;2.31e-17;12!CL:0000239;3.60e-11;3!CL:1000615;3.60e-11;3!CL:0002541;3.60e-11;3!CL:0002306;3.60e-11;3!CL:0000650;6.98e-08;2!CL:1000500;6.98e-08;2!CL:1000618;6.98e-08;2!CL:1001318;6.98e-08;2!CL:0002173;6.98e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.28e-33,10;CL:1000494,3.28e-33,10;CL:1000497,1.42e-31,17;CL:0002518,1.42e-31,17;CL:1000449,6.74e-26,15;CL:0002681,2.31e-17,12;CL:0002584,2.31e-17,12;CL:0000239,3.23e-11,3;CL:1000615,3.23e-11,3;CL:0002541,3.23e-11,3;CL:0002306,3.23e-11,3;CL:0000650,8.47e-08,2;CL:1000500,8.47e-08,2;CL:1000618,8.47e-08,2;CL:1001318,8.47e-08,2;CL:0002173,8.47e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;9.61e-13;10!UBERON:0007687;9.61e-13;10!UBERON:0003104;8.48e-10;31!UBERON:0007297;7.63e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;7.07e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,7.07e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.00e-23!27;UBERON:0003918!1.00e-23!27;UBERON:0005095!1.00e-23!27;UBERON:0007687!1.00e-23!27;UBERON:0000489!1.78e-21!32;UBERON:0005172!3.51e-19!55;UBERON:0005173!3.51e-19!55;UBERON:0000080!3.77e-19!18;UBERON:0002120!3.77e-19!18;UBERON:0004875!3.77e-19!18;UBERON:0005721!3.77e-19!18;UBERON:0005754!3.77e-19!18;UBERON:0007297!3.77e-19!18;UBERON:0006554!7.58e-18!44;UBERON:0009773!1.50e-17!12;UBERON:0001231!1.50e-17!12;UBERON:0004810!1.50e-17!12;UBERON:0001008!2.58e-17!45;UBERON:0006555!3.73e-17!17;UBERON:0005103!3.73e-17!17;UBERON:0000083!3.73e-17!17;UBERON:0009201!3.73e-17!17;UBERON:0004819!3.73e-17!17;UBERON:0006553!3.73e-17!17;UBERON:0003074!3.73e-17!17;UBERON:0003060!3.73e-17!17;UBERON:0004876!6.97e-17!20;UBERON:0002417!1.39e-16!61;UBERON:0000916!1.39e-16!61;UBERON:0000058!1.55e-16!26;UBERON:0003887!6.50e-16!21;UBERON:0004211!3.19e-15!16;UBERON:0001285!3.19e-15!16;UBERON:0007684!3.19e-15!16;UBERON:0003220!3.19e-15!16;UBERON:0004208!3.19e-15!16;UBERON:0003064!9.64e-14!37;UBERON:0005177!1.08e-11!107;UBERON:0001225!4.12e-10!13;UBERON:0008987!4.12e-10!13;UBERON:0001851!6.25e-10!16;UBERON:0002553!7.25e-10!70;UBERON:0003886!2.20e-09!63;UBERON:0000466!2.87e-09!126;UBERON:0003103!4.75e-09!69;UBERON:0009569!7.68e-09!113;UBERON:0006947!2.04e-08!3;UBERON:0004054!2.04e-08!3;UBERON:0000481!2.68e-08!347;UBERON:0003104!6.46e-08!238;UBERON:0009142!6.46e-08!238;UBERON:0000476!1.16e-07!3;UBERON:0006853!1.16e-07!3;UBERON:0007685!1.16e-07!3;UBERON:0004134!1.16e-07!3;UBERON:0000920!1.16e-07!3;UBERON:0000464!1.34e-07!104;UBERON:0001007!1.47e-07!155;UBERON:0001555!1.47e-07!155;UBERON:0007026!1.47e-07!155;UBERON:0004921!1.51e-07!129;UBERON:0004185!1.51e-07!129;UBERON:0000353!2.28e-07!17;UBERON:0004119!7.58e-07!169;UBERON:0000925!7.58e-07!169;UBERON:0006595!7.58e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;9.39e-34;24!UBERON:0011143;9.39e-34;24!UBERON:0004211;3.39e-33;10!UBERON:0009773;3.39e-33;10!UBERON:0001231;3.39e-33;10!UBERON:0004810;3.39e-33;10!UBERON:0000489;2.98e-27;29!UBERON:0006554;3.26e-26;30!UBERON:0001008;3.26e-26;30!UBERON:0006555;7.54e-26;15!UBERON:0004819;7.54e-26;15!UBERON:0001285;7.54e-26;15!UBERON:0007684;7.54e-26;15!UBERON:0001225;2.31e-17;12!UBERON:0008987;2.31e-17;12!UBERON:0001851;1.26e-13;15!UBERON:0000353;1.26e-13;15!UBERON:0005172;1.54e-13;52!UBERON:0005173;1.54e-13;52!UBERON:0006947;2.10e-12;3!UBERON:0004054;2.10e-12;3!UBERON:0006853;3.60e-11;3!UBERON:0007685;3.60e-11;3!UBERON:0004134;3.60e-11;3!UBERON:0003124;3.60e-11;3!UBERON:0000920;3.60e-11;3!UBERON:0002417;1.23e-10;58!UBERON:0000916;1.23e-10;58!UBERON:0005904;2.12e-09;4!UBERON:0000160;7.23e-09;17!UBERON:0005409;9.42e-09;22!UBERON:0003567;6.98e-08;2!UBERON:0003838;6.98e-08;2!UBERON:0003586;6.98e-08;2!UBERON:0005169;6.98e-08;2!UBERON:0002321;6.98e-08;2!UBERON:0005215;6.98e-08;2!UBERON:0002303;6.98e-08;2!UBERON:0002319;6.98e-08;2!UBERON:0002108;3.12e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.91e-40,26;UBERON:0003918,4.91e-40,26;UBERON:0011143,4.91e-40,26;UBERON:0005095,4.91e-40,26;UBERON:0007687,4.91e-40,26;UBERON:0004810,3.28e-33,10;UBERON:0000489,7.78e-33,31;UBERON:0006555,4.20e-29,16;UBERON:0004819,4.20e-29,16;UBERON:0005172,3.63e-26,54;UBERON:0005173,3.63e-26,54;UBERON:0004211,6.74e-26,15;UBERON:0009773,6.74e-26,15;UBERON:0001231,6.74e-26,15;UBERON:0001285,6.74e-26,15;UBERON:0007684,6.74e-26,15;UBERON:0004208,6.74e-26,15;UBERON:0006554,2.12e-25,47;UBERON:0001008,9.15e-25,48;UBERON:0002417,5.47e-23,60;UBERON:0000916,5.47e-23,60;UBERON:0001225,2.31e-17,12;UBERON:0008987,2.31e-17,12;UBERON:0005177,3.31e-14,101;UBERON:0001851,1.26e-13,15;UBERON:0000353,1.26e-13,15;UBERON:0003103,1.50e-12,68;UBERON:0006947,2.10e-12,3;UBERON:0004054,2.10e-12,3;UBERON:0006853,3.23e-11,3;UBERON:0007685,3.23e-11,3;UBERON:0004134,3.23e-11,3;UBERON:0000920,3.23e-11,3;UBERON:0009569,5.86e-11,112;UBERON:0000080,8.64e-10,9;UBERON:0002120,8.64e-10,9;UBERON:0004875,8.64e-10,9;UBERON:0005721,8.64e-10,9;UBERON:0005754,8.64e-10,9;UBERON:0007297,8.64e-10,9;UBERON:0005904,2.12e-09,4;UBERON:0000160,7.14e-09,17;UBERON:0004876,5.98e-08,11;UBERON:0003567,8.47e-08,2;UBERON:0003838,8.47e-08,2;UBERON:0003586,8.47e-08,2;UBERON:0005169,8.47e-08,2;UBERON:0002321,8.47e-08,2;UBERON:0005215,8.47e-08,2;UBERON:0002303,8.47e-08,2;UBERON:0002319,8.47e-08,2;UBERON:0003104,9.75e-08,160;UBERON:0009142,9.75e-08,160;UBERON:0005409,1.35e-07,25;UBERON:0003887,2.93e-07,12;UBERON:0002108,3.26e-07,4;UBERON:0005103,3.59e-07,8;UBERON:0000083,3.59e-07,8;UBERON:0009201,3.59e-07,8;UBERON:0006553,3.59e-07,8;UBERON:0003074,3.59e-07,8;UBERON:0003060,3.59e-07,8 | |||
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| ||
|short_description=p1@KCNJ16 | |||
}} | }} |
Latest revision as of 01:55, 17 September 2015
Short description: | p1@KCNJ16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNJ16_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 32bp_to_ENST00000283936, ENST00000392671, NM_018658, NM_170741, uc002jin.2, uc002jio.2_5end |
EntrezGene: | KCNJ16 |
HGNC: | 6262 |
UniProt: | Q9NPI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.28e-33 | 10 |
nephron tubule epithelial cell | 3.28e-33 | 10 |
kidney cell | 1.42e-31 | 17 |
kidney epithelial cell | 1.42e-31 | 17 |
epithelial cell of nephron | 6.74e-26 | 15 |
kidney cortical cell | 2.31e-17 | 12 |
renal cortical epithelial cell | 2.31e-17 | 12 |
brush border epithelial cell | 3.23e-11 | 3 |
kidney cortex tubule cell | 3.23e-11 | 3 |
chorionic membrane mesenchymal stem cell | 3.23e-11 | 3 |
epithelial cell of proximal tubule | 3.23e-11 | 3 |
mesangial cell | 8.47e-08 | 2 |
kidney interstitial cell | 8.47e-08 | 2 |
juxtaglomerular complex cell | 8.47e-08 | 2 |
renal interstitial pericyte | 8.47e-08 | 2 |
extraglomerular mesangial cell | 8.47e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 7.07e-09 | 2 |