FFCP PHASE1:Hg19::chr14:24641910..24641937,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:24641910..24641937,+
|short_description=p4@REC8
|description=CAGE_peak_4_at_REC8_5end
|association_with_transcript=-20bp_to_ENST00000558782_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9985 | |EntrezGene=9985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16879 | |HGNC=16879 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000558782_5end | |||
|cluster_id=chr14:24641910..24641937,+ | |||
|description=CAGE_peak_4_at_REC8_5end | |||
|id=chr14:24641910..24641937,+ | |||
|ontology_enrichment_celltype=CL:1000449!1.69e-11!16;CL:1000497!8.67e-10!18;CL:0002518!8.67e-10!18;CL:1000507!1.69e-09!12;CL:1000494!1.69e-09!12;CL:0002681!2.90e-08!13;CL:0002584!2.90e-08!13;CL:0000133!2.94e-08!59;CL:0002319!2.15e-07!25;CL:1000612!7.57e-07!7;CL:1000746!7.57e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.20e-15;10!CL:1000494;2.20e-15;10!CL:1000449;2.58e-14;15!CL:0000650;2.33e-13;2!CL:1000500;2.33e-13;2!CL:1000618;2.33e-13;2!CL:1001318;2.33e-13;2!CL:0002173;2.33e-13;2!CL:0000123;5.51e-13;2!CL:0000242;5.51e-13;2!CL:1000497;1.44e-12;17!CL:0002518;1.44e-12;17!CL:0000077;3.74e-11;19!CL:0000540;3.28e-10;6!CL:0000404;3.28e-10;6!CL:0000632;5.96e-09;3!CL:1000746;2.02e-08;7!CL:1000612;2.02e-08;7!CL:0002681;2.69e-08;12!CL:0002584;2.69e-08;12!CL:0002319;9.66e-08;25!CL:0000669;4.22e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.57e-15,10;CL:1000494,2.57e-15,10;CL:1000449,2.42e-14,15;CL:0000650,4.33e-13,2;CL:1000500,4.33e-13,2;CL:1000618,4.33e-13,2;CL:1001318,4.33e-13,2;CL:0002173,4.33e-13,2;CL:0000242,6.64e-13,2;CL:0000047,7.92e-13,8;CL:1000497,1.36e-12,17;CL:0002518,1.36e-12,17;CL:0000077,4.67e-11,19;CL:0000540,3.29e-10,6;CL:0000031,3.29e-10,6;CL:0000404,3.29e-10,6;CL:0000632,5.29e-09,3;CL:1000746,2.13e-08,7;CL:1000612,2.13e-08,7;CL:0002681,2.65e-08,12;CL:0002584,2.65e-08,12;CL:0002319,1.02e-07,25;CL:0000669,5.72e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000031;3.28e-10;6!UBERON:0005754;2.49e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p4@REC8 | |||
}} | }} |
Latest revision as of 13:41, 19 September 2015
Short description: | p4@REC8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_REC8_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000558782_5end |
EntrezGene: | REC8 |
HGNC: | 16879 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.57e-15 | 10 |
nephron tubule epithelial cell | 2.57e-15 | 10 |
epithelial cell of nephron | 2.42e-14 | 15 |
mesangial cell | 4.33e-13 | 2 |
kidney interstitial cell | 4.33e-13 | 2 |
juxtaglomerular complex cell | 4.33e-13 | 2 |
renal interstitial pericyte | 4.33e-13 | 2 |
extraglomerular mesangial cell | 4.33e-13 | 2 |
Merkel cell | 6.64e-13 | 2 |
neuronal stem cell | 7.92e-13 | 8 |
kidney cell | 1.36e-12 | 17 |
kidney epithelial cell | 1.36e-12 | 17 |
mesothelial cell | 4.67e-11 | 19 |
neuron | 3.29e-10 | 6 |
neuroblast | 3.29e-10 | 6 |
electrically signaling cell | 3.29e-10 | 6 |
hepatic stellate cell | 5.29e-09 | 3 |
glomerular cell | 2.13e-08 | 7 |
kidney corpuscule cell | 2.13e-08 | 7 |
kidney cortical cell | 2.65e-08 | 12 |
renal cortical epithelial cell | 2.65e-08 | 12 |
neural cell | 1.02e-07 | 25 |
pericyte cell | 5.72e-07 | 4 |