FFCP PHASE1:Hg19::chr5:95920642..95920681,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=445bp_to_ENST00000513158_5end | |association_with_transcript=445bp_to_ENST00000513158_5end | ||
|cluster_id=chr5:95920642..95920681,+ | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_1_at_ENST00000513158_5end | |description=CAGE_peak_1_at_ENST00000513158_5end | ||
|id=chr5:95920642..95920681,+ | |id=chr5:95920642..95920681,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.07e-61!24;CL:0000115!1.16e-59!35;CL:0000071!2.66e-47!18;CL:0002546!2.66e-47!18;CL:0002078!1.32e-45!44;CL:0000213!3.62e-33!57;CL:0000215!3.62e-33!57;CL:1000413!1.39e-24!9;CL:0002543!2.82e-17!6;CL:0002544!5.98e-17!6;CL:0005020!8.87e-16!6;CL:0002138!8.87e-16!6;CL:0005022!8.87e-16!6;CL:0000222!1.66e-12!119;CL:0000076!4.72e-10!62;CL:0002618!1.61e-09!3;CL:0002144!1.12e-08!3;CL:0000666!9.83e-07!4;CL:0002188!9.83e-07!4 | |ontology_enrichment_celltype=CL:0002139!1.07e-61!24;CL:0000115!1.16e-59!35;CL:0000071!2.66e-47!18;CL:0002546!2.66e-47!18;CL:0002078!1.32e-45!44;CL:0000213!3.62e-33!57;CL:0000215!3.62e-33!57;CL:1000413!1.39e-24!9;CL:0002543!2.82e-17!6;CL:0002544!5.98e-17!6;CL:0005020!8.87e-16!6;CL:0002138!8.87e-16!6;CL:0005022!8.87e-16!6;CL:0000222!1.66e-12!119;CL:0000076!4.72e-10!62;CL:0002618!1.61e-09!3;CL:0002144!1.12e-08!3;CL:0000666!9.83e-07!4;CL:0002188!9.83e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.68e-117;24!CL:0000071;3.83e-103;18!CL:0000115;3.44e-99;36!CL:1000413;2.58e-58;9!CL:0002078;3.73e-57;45!CL:0000213;5.86e-46;58!CL:0000215;5.86e-46;58!CL:0002543;3.30e-40;6!CL:0002544;2.12e-39;6!CL:0002618;4.20e-21;3!CL:0002188;1.71e-20;5!CL:0000076;1.43e-17;63!CL:0002138;2.09e-17;6!CL:1000746;1.05e-14;7!CL:1000612;1.05e-14;7!CL:0002545;3.32e-14;2!CL:0002144;1.74e-09;3!CL:0002681;1.21e-08;12!CL:0002584;1.21e-08;12!CL:1000449;6.17e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.89e-118,36;CL:0002139,6.39e-117,24;CL:0000071,3.71e-103,18;CL:0002546,3.71e-103,18;CL:0002078,2.59e-93,45;CL:0000213,2.28e-71,58;CL:0000215,2.28e-71,58;CL:1000413,2.50e-58,9;CL:0002543,3.19e-40,6;CL:0002544,2.05e-39,6;CL:0000222,9.46e-32,121;CL:0000076,4.93e-27,63;CL:0002618,4.35e-21,3;CL:0002188,1.71e-20,5;CL:0005020,2.33e-17,6;CL:0002138,2.33e-17,6;CL:0005022,2.33e-17,6;CL:1000746,1.05e-14,7;CL:1000612,1.05e-14,7;CL:0002545,3.21e-14,2;CL:0002321,1.07e-12,250;CL:0000066,1.26e-12,253;CL:0002144,1.78e-09,3;CL:0002681,1.21e-08,12;CL:0002584,1.21e-08,12;CL:1000449,6.17e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;3.83e-103;18!CL:0005022;2.09e-17;6!CL:0000222;3.72e-13;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.66e-47!18;UBERON:0004638!2.66e-47!18;UBERON:0004852!2.66e-47!18;UBERON:0000487!1.08e-37!22;UBERON:0006914!1.64e-32!25;UBERON:0003915!1.39e-24!9;UBERON:0004700!1.39e-24!9;UBERON:0001917!1.39e-24!9;UBERON:0000055!4.36e-20!69;UBERON:0002049!1.35e-16!79;UBERON:0007798!1.35e-16!79;UBERON:0004872!5.33e-16!84;UBERON:0004535!3.55e-15!110;UBERON:0001009!1.51e-14!113;UBERON:0001981!2.24e-13!60;UBERON:0007500!2.24e-13!60;UBERON:0004537!2.24e-13!60;UBERON:0006965!2.24e-13!60;UBERON:0003914!1.60e-12!118;UBERON:0001473!1.26e-11!8;UBERON:0004536!1.26e-11!8;UBERON:0006558!1.26e-11!8;UBERON:0001638!3.33e-11!9;UBERON:0003920!3.33e-11!9;UBERON:0004582!3.33e-11!9;UBERON:0002465!3.91e-09!10;UBERON:0001915!1.12e-08!3;UBERON:0001982!1.12e-08!3;UBERON:0003081!3.50e-08!216;UBERON:0004111!1.20e-07!241;UBERON:0000025!2.36e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.83e-103;18!UBERON:0001986;3.83e-103;18!UBERON:0004852;3.83e-103;18!UBERON:0000487;8.70e-84;22!UBERON:0006914;2.49e-73;25!UBERON:0003915;2.58e-58;9!UBERON:0004700;2.58e-58;9!UBERON:0001917;2.58e-58;9!UBERON:0000490;3.29e-50;33!UBERON:0001638;1.17e-26;9!UBERON:0003920;1.17e-26;9!UBERON:0004582;1.17e-26;9!UBERON:0000055;1.16e-22;65!UBERON:0007500;2.84e-22;56!UBERON:0001981;2.84e-22;56!UBERON:0004537;2.84e-22;56!UBERON:0003914;3.45e-16;74!UBERON:0002049;3.82e-16;75!UBERON:0007798;3.82e-16;75!UBERON:0000074;1.05e-14;7!UBERON:0001229;1.05e-14;7!UBERON:0005800;3.32e-14;2!UBERON:0001515;3.32e-14;2!UBERON:0001473;4.19e-13;8!UBERON:0004536;4.19e-13;8!UBERON:0006558;4.19e-13;8!UBERON:0002066;7.02e-13;5!UBERON:0000025;2.80e-12;93!UBERON:0001637;4.11e-11;42!UBERON:0003509;4.11e-11;42!UBERON:0004572;4.11e-11;42!UBERON:0001009;5.37e-11;112!UBERON:0000947;6.68e-11;21!UBERON:0010191;6.68e-11;21!UBERON:0002465;1.63e-10;10!UBERON:0000353;2.40e-10;15!UBERON:0010523;1.74e-09;3!UBERON:0001915;1.74e-09;3!UBERON:0001982;1.74e-09;3!UBERON:0004535;4.14e-09;109!UBERON:0001225;1.21e-08;12!UBERON:0008987;1.21e-08;12!UBERON:0004111;1.58e-08;130!UBERON:0000119;7.52e-08;139!UBERON:0000483;1.34e-07;136!UBERON:0010260;2.36e-07;9!UBERON:0004573;4.88e-07;33!UBERON:0004571;4.88e-07;33!UBERON:0001851;6.17e-07;15!UBERON:0006555;6.17e-07;15!UBERON:0004819;6.17e-07;15!UBERON:0001285;6.17e-07;15!UBERON:0007684;6.17e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.71e-103,18;UBERON:0001986,3.71e-103,18;UBERON:0004852,3.71e-103,18;UBERON:0000487,8.49e-84,22;UBERON:0006914,2.43e-73,25;UBERON:0003915,2.50e-58,9;UBERON:0004700,2.50e-58,9;UBERON:0001917,2.50e-58,9;UBERON:0000055,1.71e-42,68;UBERON:0002049,1.71e-36,78;UBERON:0007798,1.71e-36,78;UBERON:0007500,1.10e-32,59;UBERON:0001981,1.10e-32,59;UBERON:0004537,1.10e-32,59;UBERON:0006965,1.10e-32,59;UBERON:0001638,1.14e-26,9;UBERON:0003920,1.14e-26,9;UBERON:0004582,1.14e-26,9;UBERON:0003914,4.16e-25,117;UBERON:0004535,7.02e-25,109;UBERON:0001009,4.26e-24,112;UBERON:0004872,3.58e-22,83;UBERON:0004111,8.15e-15,240;UBERON:0010532,1.05e-14,7;UBERON:0000074,1.05e-14,7;UBERON:0001229,1.05e-14,7;UBERON:0001230,1.05e-14,7;UBERON:0003220,1.05e-14,7;UBERON:0005749,1.05e-14,7;UBERON:0004199,1.05e-14,7;UBERON:0004209,1.05e-14,7;UBERON:0004198,1.05e-14,7;UBERON:0005800,3.21e-14,2;UBERON:0001515,3.21e-14,2;UBERON:0000490,9.55e-14,148;UBERON:0000025,1.95e-13,192;UBERON:0001473,4.54e-13,8;UBERON:0004536,4.54e-13,8;UBERON:0006558,4.54e-13,8;UBERON:0005103,6.84e-13,8;UBERON:0000083,6.84e-13,8;UBERON:0009201,6.84e-13,8;UBERON:0006553,6.84e-13,8;UBERON:0003074,6.84e-13,8;UBERON:0003060,6.84e-13,8;UBERON:0002066,7.16e-13,5;UBERON:0000080,1.77e-11,9;UBERON:0002120,1.77e-11,9;UBERON:0004875,1.77e-11,9;UBERON:0005721,1.77e-11,9;UBERON:0005754,1.77e-11,9;UBERON:0007297,1.77e-11,9;UBERON:0001637,2.26e-11,42;UBERON:0003509,2.26e-11,42;UBERON:0004572,2.26e-11,42;UBERON:0003081,3.28e-11,203;UBERON:0000947,6.62e-11,21;UBERON:0010191,6.62e-11,21;UBERON:0002465,1.74e-10,10;UBERON:0000353,2.38e-10,15;UBERON:0010523,1.78e-09,3;UBERON:0001915,1.78e-09,3;UBERON:0001982,1.78e-09,3;UBERON:0004876,2.03e-09,11;UBERON:0001225,1.21e-08,12;UBERON:0008987,1.21e-08,12;UBERON:0003887,1.21e-08,12;UBERON:0000058,3.95e-08,19;UBERON:0000483,1.32e-07,306;UBERON:0000119,1.74e-07,309;UBERON:0010260,2.39e-07,9;UBERON:0001851,6.17e-07,15;UBERON:0004211,6.17e-07,15;UBERON:0009773,6.17e-07,15;UBERON:0001231,6.17e-07,15;UBERON:0001285,6.17e-07,15;UBERON:0007684,6.17e-07,15;UBERON:0004208,6.17e-07,15;UBERON:0004573,9.86e-07,33;UBERON:0004571,9.86e-07,33 | |||
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|short_description=p1@ENST00000513158 | |short_description=p1@ENST00000513158 | ||
}} | }} |
Latest revision as of 17:30, 30 July 2015
Short description: | p1@ENST00000513158 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000513158_5end |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | 445bp_to_ENST00000513158_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.89e-118 | 36 |
endothelial cell of vascular tree | 6.39e-117 | 24 |
blood vessel endothelial cell | 3.71e-103 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.71e-103 | 18 |
meso-epithelial cell | 2.59e-93 | 45 |
lining cell | 2.28e-71 | 58 |
barrier cell | 2.28e-71 | 58 |
endothelial cell of artery | 2.50e-58 | 9 |
vein endothelial cell | 3.19e-40 | 6 |
aortic endothelial cell | 2.05e-39 | 6 |
mesodermal cell | 9.46e-32 | 121 |
squamous epithelial cell | 4.93e-27 | 63 |
endothelial cell of umbilical vein | 4.35e-21 | 3 |
glomerular endothelial cell | 1.71e-20 | 5 |
lymphangioblast | 2.33e-17 | 6 |
endothelial cell of lymphatic vessel | 2.33e-17 | 6 |
vascular lymphangioblast | 2.33e-17 | 6 |
glomerular cell | 1.05e-14 | 7 |
kidney corpuscule cell | 1.05e-14 | 7 |
thoracic aorta endothelial cell | 3.21e-14 | 2 |
embryonic cell | 1.07e-12 | 250 |
epithelial cell | 1.26e-12 | 253 |
capillary endothelial cell | 1.78e-09 | 3 |
kidney cortical cell | 1.21e-08 | 12 |
renal cortical epithelial cell | 1.21e-08 | 12 |
epithelial cell of nephron | 6.17e-07 | 15 |