FFCP PHASE1:Hg19::chr19:45226115..45226126,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45226115..45226126,- | |||
|description=CAGE_peak_at_chr19:45226115..45226126,- | |description=CAGE_peak_at_chr19:45226115..45226126,- | ||
|id=chr19:45226115..45226126,- | |id=chr19:45226115..45226126,- | ||
|ontology_enrichment_celltype=CL:0000115!2.05e-52!35;CL:0002139!3.22e-52!24;CL:0002078!1.57e-40!44;CL:0000071!3.45e-36!18;CL:0002546!3.45e-36!18;CL:0000213!4.78e-36!57;CL:0000215!4.78e-36!57;CL:0005020!9.92e-18!6;CL:0002138!9.92e-18!6;CL:0005022!9.92e-18!6;CL:0002543!1.30e-17!6;CL:0000222!3.90e-14!119;CL:0002618!1.48e-13!3;CL:0002144!1.98e-13!3;CL:0000076!1.97e-11!62;CL:1000413!5.00e-11!9;CL:0000666!6.68e-10!4;CL:0002188!6.68e-10!4;CL:1000612!8.87e-10!7;CL:1000746!8.87e-10!7;CL:0000066!5.29e-09!254;CL:0000220!1.55e-08!246;CL:0002321!2.07e-08!248;CL:0000181!4.46e-08!12;CL:0000417!4.46e-08!12;CL:0000668!4.46e-08!12;CL:0000414!4.46e-08!12;CL:0000412!4.46e-08!12;CL:0000182!4.46e-08!12 | |ontology_enrichment_celltype=CL:0000115!2.05e-52!35;CL:0002139!3.22e-52!24;CL:0002078!1.57e-40!44;CL:0000071!3.45e-36!18;CL:0002546!3.45e-36!18;CL:0000213!4.78e-36!57;CL:0000215!4.78e-36!57;CL:0005020!9.92e-18!6;CL:0002138!9.92e-18!6;CL:0005022!9.92e-18!6;CL:0002543!1.30e-17!6;CL:0000222!3.90e-14!119;CL:0002618!1.48e-13!3;CL:0002144!1.98e-13!3;CL:0000076!1.97e-11!62;CL:1000413!5.00e-11!9;CL:0000666!6.68e-10!4;CL:0002188!6.68e-10!4;CL:1000612!8.87e-10!7;CL:1000746!8.87e-10!7;CL:0000066!5.29e-09!254;CL:0000220!1.55e-08!246;CL:0002321!2.07e-08!248;CL:0000181!4.46e-08!12;CL:0000417!4.46e-08!12;CL:0000668!4.46e-08!12;CL:0000414!4.46e-08!12;CL:0000412!4.46e-08!12;CL:0000182!4.46e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.65e-49;36!CL:0002139;2.05e-47;24!CL:0002078;3.11e-35;45!CL:0002138;2.05e-31;6!CL:0000071;3.66e-23;18!CL:0002188;1.15e-21;5!CL:0000213;9.84e-21;58!CL:0000215;9.84e-21;58!CL:0002543;2.33e-18;6!CL:0002618;6.22e-17;3!CL:0002144;1.13e-16;3!CL:1000746;1.15e-15;7!CL:1000612;1.15e-15;7!CL:0002379;1.71e-13;1!CL:0002681;2.23e-09;12!CL:0002584;2.23e-09;12!CL:1000449;1.32e-07;15!CL:0002262;4.17e-07;2!CL:0002545;4.17e-07;2!CL:1000398;4.17e-07;2!CL:1000497;9.12e-07;17!CL:0002518;9.12e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.47e-62,36;CL:0002078,4.31e-49,45;CL:0002139,1.53e-47,24;CL:0000213,9.92e-38,58;CL:0000215,9.92e-38,58;CL:0005020,1.14e-31,6;CL:0002138,1.14e-31,6;CL:0005022,1.14e-31,6;CL:0000071,3.89e-23,18;CL:0002546,3.89e-23,18;CL:0002188,1.20e-21,5;CL:0002543,2.20e-18,6;CL:0000222,3.48e-17,121;CL:0002618,6.74e-17,3;CL:0002144,1.00e-16,3;CL:1000746,1.18e-15,7;CL:1000612,1.18e-15,7;CL:0002379,1.82e-13,1;CL:0002321,5.98e-10,250;CL:0000066,6.67e-10,253;CL:0002681,2.26e-09,12;CL:0002584,2.26e-09,12;CL:1000449,1.34e-07,15;CL:0002262,3.93e-07,2;CL:1000398,3.93e-07,2;CL:0002545,5.28e-07,2;CL:1000497,9.21e-07,17;CL:0002518,9.21e-07,17 | |||
|ontology_enrichment_development_v019=CL:0005022;2.05e-31;6!CL:0002546;3.66e-23;18!CL:0000222;2.06e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;1.71e-13;1!DOID:3565;1.71e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.82e-13,1;DOID:3565,1.82e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!3.45e-36!18;UBERON:0004638!3.45e-36!18;UBERON:0004852!3.45e-36!18;UBERON:0000487!4.70e-29!22;UBERON:0006914!3.35e-25!25;UBERON:0000055!3.41e-17!69;UBERON:0002049!2.00e-14!79;UBERON:0007798!2.00e-14!79;UBERON:0004535!3.49e-14!110;UBERON:0001009!1.17e-13!113;UBERON:0001915!1.98e-13!3;UBERON:0001982!1.98e-13!3;UBERON:0001473!3.24e-13!8;UBERON:0004536!3.24e-13!8;UBERON:0006558!3.24e-13!8;UBERON:0003914!1.12e-12!118;UBERON:0001638!1.24e-11!9;UBERON:0003920!1.24e-11!9;UBERON:0004582!1.24e-11!9;UBERON:0003915!5.00e-11!9;UBERON:0004700!5.00e-11!9;UBERON:0001917!5.00e-11!9;UBERON:0002465!1.68e-10!10;UBERON:0001981!2.31e-10!60;UBERON:0007500!2.31e-10!60;UBERON:0004537!2.31e-10!60;UBERON:0006965!2.31e-10!60;UBERON:0000074!8.87e-10!7;UBERON:0001229!8.87e-10!7;UBERON:0001230!8.87e-10!7;UBERON:0005749!8.87e-10!7;UBERON:0004199!8.87e-10!7;UBERON:0004209!8.87e-10!7;UBERON:0004198!8.87e-10!7;UBERON:0004111!7.80e-09!241;UBERON:0004872!9.72e-09!84;UBERON:0002066!2.71e-08!5;UBERON:0000477!1.07e-07!286;UBERON:0000025!5.08e-07!194;UBERON:0000490!5.43e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.16e-23;8!UBERON:0004536;1.16e-23;8!UBERON:0006558;1.16e-23;8!UBERON:0004638;3.66e-23;18!UBERON:0001986;3.66e-23;18!UBERON:0004852;3.66e-23;18!UBERON:0002465;5.31e-19;10!UBERON:0000487;6.62e-19;22!UBERON:0010523;1.13e-16;3!UBERON:0001915;1.13e-16;3!UBERON:0001982;1.13e-16;3!UBERON:0006914;1.33e-16;25!UBERON:0000074;1.15e-15;7!UBERON:0001229;1.15e-15;7!UBERON:0000353;1.00e-12;15!UBERON:0001638;1.91e-12;9!UBERON:0003920;1.91e-12;9!UBERON:0004582;1.91e-12;9!UBERON:0000055;9.05e-12;65!UBERON:0000490;1.91e-11;33!UBERON:0002066;1.54e-10;5!UBERON:0001225;2.23e-09;12!UBERON:0008987;2.23e-09;12!UBERON:0002049;2.54e-08;75!UBERON:0007798;2.54e-08;75!UBERON:0001851;1.32e-07;15!UBERON:0006555;1.32e-07;15!UBERON:0004819;1.32e-07;15!UBERON:0001285;1.32e-07;15!UBERON:0007684;1.32e-07;15!UBERON:0002405;3.49e-07;27!UBERON:0001281;4.17e-07;2!UBERON:0003497;4.17e-07;2!UBERON:0003909;4.17e-07;2!UBERON:0005800;4.17e-07;2!UBERON:0003835;4.17e-07;2!UBERON:0001515;4.17e-07;2!UBERON:0003914;6.27e-07;74 | |||
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|short_description=p@chr19:45226115..45226126,- | |short_description=p@chr19:45226115..45226126,- | ||
}} | }} |
Latest revision as of 14:41, 27 July 2015
Short description: | p@chr19:45226115..45226126, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45226115..45226126, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.47e-62 | 36 |
meso-epithelial cell | 4.31e-49 | 45 |
endothelial cell of vascular tree | 1.53e-47 | 24 |
lining cell | 9.92e-38 | 58 |
barrier cell | 9.92e-38 | 58 |
lymphangioblast | 1.14e-31 | 6 |
endothelial cell of lymphatic vessel | 1.14e-31 | 6 |
vascular lymphangioblast | 1.14e-31 | 6 |
blood vessel endothelial cell | 3.89e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.89e-23 | 18 |
glomerular endothelial cell | 1.20e-21 | 5 |
vein endothelial cell | 2.20e-18 | 6 |
mesodermal cell | 3.48e-17 | 121 |
endothelial cell of umbilical vein | 6.74e-17 | 3 |
capillary endothelial cell | 1.00e-16 | 3 |
glomerular cell | 1.18e-15 | 7 |
kidney corpuscule cell | 1.18e-15 | 7 |
meningothelial cell | 1.82e-13 | 1 |
embryonic cell | 5.98e-10 | 250 |
epithelial cell | 6.67e-10 | 253 |
kidney cortical cell | 2.26e-09 | 12 |
renal cortical epithelial cell | 2.26e-09 | 12 |
epithelial cell of nephron | 1.34e-07 | 15 |
endothelial cell of sinusoid | 3.93e-07 | 2 |
endothelial cell of hepatic sinusoid | 3.93e-07 | 2 |
thoracic aorta endothelial cell | 5.28e-07 | 2 |
kidney cell | 9.21e-07 | 17 |
kidney epithelial cell | 9.21e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.82e-13 | 1 |
meningioma | 1.82e-13 | 1 |