FFCP PHASE1:Hg19::chr13:111164549..111164576,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:111164549..111164576,+ | |||
|coexpression_cluster_id=C566 | |||
|description=CAGE_peak_at_chr13:111164549..111164576,+ | |description=CAGE_peak_at_chr13:111164549..111164576,+ | ||
|id=chr13:111164549..111164576,+ | |id=chr13:111164549..111164576,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.66e-17!180;CL:0000222!4.54e-12!119;CL:0000057!4.80e-10!75;CL:0000183!1.06e-07!59;CL:1000449!2.68e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.66e-17!180;CL:0000222!4.54e-12!119;CL:0000057!4.80e-10!75;CL:0000183!1.06e-07!59;CL:1000449!2.68e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.40e-13;15!CL:1000497;2.44e-11;17!CL:0002518;2.44e-11;17!CL:0002681;1.33e-09;12!CL:0002584;1.33e-09;12!CL:1000746;1.46e-09;7!CL:1000612;1.46e-09;7!CL:0002138;2.92e-08;6!CL:0000136;4.36e-08;13!CL:1000507;1.07e-07;10!CL:1000494;1.07e-07;10!CL:0002188;1.39e-07;5!CL:0000349;2.36e-07;19!CL:0000115;6.95e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,3.90e-13,15;CL:1000497,3.70e-11,17;CL:0002518,3.70e-11,17;CL:0000057,1.29e-10,76;CL:0002681,1.91e-09,12;CL:0002584,1.91e-09,12;CL:1000746,3.41e-09,7;CL:1000612,3.41e-09,7;CL:0005020,2.77e-08,6;CL:0002138,2.77e-08,6;CL:0005022,2.77e-08,6;CL:0000115,4.00e-08,36;CL:1000507,1.09e-07,10;CL:1000494,1.09e-07,10;CL:0002188,2.47e-07,5;CL:0000349,2.75e-07,19;CL:0002078,3.85e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;2.92e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.18e-11!79;UBERON:0007798!1.18e-11!79;UBERON:0003914!1.19e-10!118;UBERON:0001009!1.20e-10!113;UBERON:0004535!1.48e-10!110;UBERON:0004872!3.31e-09!84;UBERON:0000055!9.32e-09!69;UBERON:0005256!7.77e-08!143;UBERON:0003064!1.82e-07!37;UBERON:0006555!2.53e-07!17;UBERON:0005103!2.53e-07!17;UBERON:0000083!2.53e-07!17;UBERON:0009201!2.53e-07!17;UBERON:0004819!2.53e-07!17;UBERON:0006553!2.53e-07!17;UBERON:0003074!2.53e-07!17;UBERON:0003060!2.53e-07!17;UBERON:0004211!2.68e-07!16;UBERON:0001285!2.68e-07!16;UBERON:0007684!2.68e-07!16;UBERON:0003220!2.68e-07!16;UBERON:0004208!2.68e-07!16;UBERON:0002385!2.93e-07!63;UBERON:0001015!2.93e-07!63;UBERON:0000383!2.93e-07!63;UBERON:0001134!6.38e-07!61;UBERON:0002036!6.38e-07!61;UBERON:0003082!6.38e-07!61;UBERON:0000353!9.09e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.40e-13;15!UBERON:0004819;2.40e-13;15!UBERON:0001285;2.40e-13;15!UBERON:0007684;2.40e-13;15!UBERON:0000353;2.63e-10;15!UBERON:0001225;1.33e-09;12!UBERON:0008987;1.33e-09;12!UBERON:0000074;1.46e-09;7!UBERON:0001229;1.46e-09;7!UBERON:0003688;7.36e-09;6!UBERON:0002358;7.36e-09;6!UBERON:0003684;7.36e-09;6!UBERON:0001178;7.36e-09;6!UBERON:0001473;8.96e-08;8!UBERON:0004536;8.96e-08;8!UBERON:0006558;8.96e-08;8!UBERON:0004211;1.07e-07;10!UBERON:0009773;1.07e-07;10!UBERON:0001231;1.07e-07;10!UBERON:0004810;1.07e-07;10!UBERON:0000478;1.34e-07;24!UBERON:0001851;3.30e-07;15!UBERON:0002113;5.08e-07;24!UBERON:0011143;5.08e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,3.90e-13,15;UBERON:0009773,3.90e-13,15;UBERON:0001231,3.90e-13,15;UBERON:0001285,3.90e-13,15;UBERON:0007684,3.90e-13,15;UBERON:0004208,3.90e-13,15;UBERON:0006555,4.40e-12,16;UBERON:0004819,4.40e-12,16;UBERON:0003914,3.19e-11,117;UBERON:0000353,3.31e-10,15;UBERON:0002417,1.54e-09,60;UBERON:0000916,1.54e-09,60;UBERON:0001225,1.91e-09,12;UBERON:0008987,1.91e-09,12;UBERON:0010532,3.41e-09,7;UBERON:0000074,3.41e-09,7;UBERON:0001229,3.41e-09,7;UBERON:0001230,3.41e-09,7;UBERON:0003220,3.41e-09,7;UBERON:0005749,3.41e-09,7;UBERON:0004199,3.41e-09,7;UBERON:0004209,3.41e-09,7;UBERON:0004198,3.41e-09,7;UBERON:0003688,4.10e-09,6;UBERON:0002358,4.10e-09,6;UBERON:0003684,4.10e-09,6;UBERON:0001178,4.10e-09,6;UBERON:0002049,9.99e-09,78;UBERON:0007798,9.99e-09,78;UBERON:0001009,4.97e-08,112;UBERON:0001473,6.19e-08,8;UBERON:0004536,6.19e-08,8;UBERON:0006558,6.19e-08,8;UBERON:0004535,6.67e-08,109;UBERON:0005103,7.17e-08,8;UBERON:0000083,7.17e-08,8;UBERON:0009201,7.17e-08,8;UBERON:0006553,7.17e-08,8;UBERON:0003074,7.17e-08,8;UBERON:0003060,7.17e-08,8;UBERON:0004810,1.09e-07,10;UBERON:0000478,1.80e-07,24;UBERON:0004876,3.97e-07,11;UBERON:0001851,4.34e-07,15;UBERON:0009569,4.42e-07,112;UBERON:0000080,7.60e-07,9;UBERON:0002120,7.60e-07,9;UBERON:0004875,7.60e-07,9;UBERON:0005721,7.60e-07,9;UBERON:0005754,7.60e-07,9;UBERON:0007297,7.60e-07,9;UBERON:0000055,8.04e-07,68 | |||
|phase1_expression=2.72517568905835,2.14100523890983,3.80576891059122,4.00293193412522,5.36353313312745,5.23403114460221,7.59899634504932,0,0.783556884599516,1.47440361900905,2.09340350391728,0.436882744260345,1.05506791291381,0.495065411840187,0,1.34465029290355,1.80808358407193,0,0,0.246242116153576,0.612002073732759,0.626909442956176,0.85870796139317,0.547497700291537,0.753255837568817,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.767175371061182,0.722878304769133,1.00267582127178,1.44846518960824,0,0.486634870302636,0.189069634328136,1.99556457716308,0.790513071238134,0.458426764241994,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,1.10047216776027,0.626984899610432,1.55050055501597,1.06729878806013,3.01248551488203,4.43112248820062,3.04108842287405,4.63717909341522,0,2.43042584364528,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.916008719652036,0,0,0,7.45457927542978,1.39293562831038,0.397227542439656,1.14734648299525,0.354668382198357,1.12135520028461,8.5399196583764,5.92002116201184,0.933633106199299,1.21239604862719,1.9615428373615,3.17850598054356,6.91411109375999,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,1.18800285728205,1.97813543422845,1.82032272387605,0.718618141816238,0.505008341862199,0,0,0,0.919463387397059,0.901428353439581,1.02088964844019,2.69084453533293,0.85422955527427,1.27159140695737,1.20036438433761,0.515262646192195,2.06112432036503,2.60563598864226,1.35021065793013,0.68205903612839,1.7670364197088,0,0.161646056818812,1.77504796258307,0.906768884048762,1.52604533079439,0.193260853163297,0.545492241181669,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0.723033089650446,0.220587945464788,0,0,0.134831308160164,0,0,1.4763109092493,1.40241773803446,2.8810180793198,4.41026134156626,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.301586917234893,0.185176890317059,0.325808305310325,0,1.44331342025273,0.231860809950154,0.939269553886573,2.7429625074604,2.77791307545966,3.99533719692656,0,0,0,0,0,0,0.503946384596579,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.190493682876507,0.381988425558278,0,1.71072446022705,0.308482478109971,0.300343057843917,0.285826432630578,0.336393253036082,1.30788020649984,0.22001485746285,2.06834745212444,3.57656445851882,1.690605505112,4.78688609852767,2.08014873822732,0.257207374262142,1.41849132023278,0.266422179016099,1.57275793023962,5.96883765930587,1.64648067356154,0.65147236858747,1.42156779497018,0,0.602878754119172,0.871533458600294,1.3996218765488,0,0,0,2.39624855491583,0,0,0.868687840005475,0.821905290201534,0.716243852959582,0,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,1.87173775377726,2.67643483195743,1.57702415033935,1.28855556491985,0,2.27407504055985,1.03473071292505,1.32845119707087,0.553107505625109,0.260650843404249,4.89502893656851,2.74514739048685,0,0,0,0,3.32870879020994,0,2.23297027036899,1.99500565274481,0.841980283299221,1.92208723883551,1.53512174720011,4.02134802859019,2.96836132889982,0.154209693802656,0.177561725313127,0,1.03850885836724,0.116210378459959,0,2.20557117333613,0,0.68888668898764,0.910455840033585,0.917870904715969,1.80479845162965,1.84836809050595,3.13739907670742,7.30696123266303,2.21658420675039,2.27466768141793,1.19065593693561,3.02282282542995,6.16909010761157,1.35473218771926,2.00675909541941,0,0,1.11937377361089,0,0,0,0.328014645699706,0,0.515205058238611,0,0,0,1.30012049207304,0,0.096670718292122,0.154048617114644,0.15350367472613,0.413509717453592,0,0.145016693914229,0.0852266274161009,0.445160178233687,0.330569830721956,0.192190067365106,0.382838137483752,0.2023155617111,0,0.94443704049192,0,0,2.12922412126809,0,0.74129687641568,0.429374660225974,0.372158369359667,2.53103539774981,2.09693213316207,0.255897791311334,0.855877976067841,0,0.78494864019923,0.899362287916574,0.54907405947211,0.589062011728432,0.404364963146632,0,0.421258456238981,0.48763373908959,1.21856744815642,2.11300293513511,0.9554993798559,0.848432591722276,0,0.551365343546124,1.99031692572366,0.876901770507525,1.15755106853338,0.655894752046633,1.82619339266434,0,1.12678241012897,0,0.491245205065606,2.1400263088875,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0.86101074534246,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0.824019371133798,0.211125408127993,2.98871982376605,0.276283915531148,0,0.102268682502155,0,3.11039587661807,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,1.1528195219403,1.25660702173681,0.543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| ||
|short_description=p@chr13:111164549..111164576,+ | |short_description=p@chr13:111164549..111164576,+ | ||
}} | }} |
Latest revision as of 14:33, 24 July 2015
Short description: | p@chr13:111164549..111164576, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111164549..111164576, + |
Coexpression cluster: | C566_Pericytes_Renal_hepatic_Fibroblast_Endothelial_Hepatic_Lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 3.90e-13 | 15 |
kidney cell | 3.70e-11 | 17 |
kidney epithelial cell | 3.70e-11 | 17 |
fibroblast | 1.29e-10 | 76 |
kidney cortical cell | 1.91e-09 | 12 |
renal cortical epithelial cell | 1.91e-09 | 12 |
glomerular cell | 3.41e-09 | 7 |
kidney corpuscule cell | 3.41e-09 | 7 |
lymphangioblast | 2.77e-08 | 6 |
endothelial cell of lymphatic vessel | 2.77e-08 | 6 |
vascular lymphangioblast | 2.77e-08 | 6 |
endothelial cell | 4.00e-08 | 36 |
kidney tubule cell | 1.09e-07 | 10 |
nephron tubule epithelial cell | 1.09e-07 | 10 |
glomerular endothelial cell | 2.47e-07 | 5 |
extraembryonic cell | 2.75e-07 | 19 |
meso-epithelial cell | 3.85e-07 | 45 |