FF:11772-123I8: Difference between revisions

Latest revision as of 18:19, 4 June 2020

Name:	salivary acinar cells, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs12811
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	parotid gland
dev stage	NA
sex	female
age	49
cell type	salivary acinar cell
cell line	NA
company	NA
collaboration	Swati Pradhan
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005311

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12811		CAGE		DRX008574		DRR009446

Accession ID Hg19

Library id		BAM		CTSS
CNhs12811		DRZ000871		DRZ002256

Accession ID Hg38

Library id		BAM		CTSS
CNhs12811		DRZ012221		DRZ013606

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.27
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.154
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0729
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.436
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.0685
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0206
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0.53
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0.799
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.108
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.661
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0795
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.273
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.167
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0.0685
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0249
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.27
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.128
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0685
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.0685
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.341
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12811

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	2.68031e-4
MA0003.1	MA0003.1	0.139
MA0004.1	MA0004.1	0.486
MA0006.1	MA0006.1	0.0812
MA0007.1	MA0007.1	0.121
MA0009.1	MA0009.1	0.576
MA0014.1	MA0014.1	0.287
MA0017.1	MA0017.1	0.0408
MA0018.2	MA0018.2	6.00063e-5
MA0019.1	MA0019.1	0.181
MA0024.1	MA0024.1	0.408
MA0025.1	MA0025.1	0.0014
MA0027.1	MA0027.1	0.0938
MA0028.1	MA0028.1	0.637
MA0029.1	MA0029.1	0.443
MA0030.1	MA0030.1	0.887
MA0031.1	MA0031.1	0.25
MA0035.2	MA0035.2	0.0611
MA0038.1	MA0038.1	0.0105
MA0039.2	MA0039.2	0.514
MA0040.1	MA0040.1	0.099
MA0041.1	MA0041.1	0.887
MA0042.1	MA0042.1	0.484
MA0043.1	MA0043.1	0.00118
MA0046.1	MA0046.1	0.201
MA0047.2	MA0047.2	0.728
MA0048.1	MA0048.1	0.11
MA0050.1	MA0050.1	2.12798e-12
MA0051.1	MA0051.1	3.47645e-8
MA0052.1	MA0052.1	0.0104
MA0055.1	MA0055.1	0.187
MA0057.1	MA0057.1	0.422
MA0058.1	MA0058.1	0.144
MA0059.1	MA0059.1	0.0505
MA0060.1	MA0060.1	0.00262
MA0061.1	MA0061.1	1.33534e-5
MA0062.2	MA0062.2	3.22368e-5
MA0065.2	MA0065.2	0.11
MA0066.1	MA0066.1	0.659
MA0067.1	MA0067.1	0.0244
MA0068.1	MA0068.1	0.0114
MA0069.1	MA0069.1	0.368
MA0070.1	MA0070.1	0.948
MA0071.1	MA0071.1	0.026
MA0072.1	MA0072.1	0.242
MA0073.1	MA0073.1	0.699
MA0074.1	MA0074.1	0.418
MA0076.1	MA0076.1	0.271
MA0077.1	MA0077.1	0.762
MA0078.1	MA0078.1	0.862
MA0079.2	MA0079.2	0.282
MA0080.2	MA0080.2	1.13347e-13
MA0081.1	MA0081.1	0.00245
MA0083.1	MA0083.1	0.0536
MA0084.1	MA0084.1	0.594
MA0087.1	MA0087.1	0.927
MA0088.1	MA0088.1	0.625
MA0090.1	MA0090.1	0.0191
MA0091.1	MA0091.1	0.0927
MA0092.1	MA0092.1	0.0524
MA0093.1	MA0093.1	0.278
MA0099.2	MA0099.2	1.32801e-4
MA0100.1	MA0100.1	0.326
MA0101.1	MA0101.1	2.09965e-6
MA0102.2	MA0102.2	0.789
MA0103.1	MA0103.1	0.185
MA0104.2	MA0104.2	0.0521
MA0105.1	MA0105.1	0.00185
MA0106.1	MA0106.1	2.06464e-16
MA0107.1	MA0107.1	3.87041e-6
MA0108.2	MA0108.2	0.894
MA0111.1	MA0111.1	0.919
MA0112.2	MA0112.2	0.0753
MA0113.1	MA0113.1	0.00284
MA0114.1	MA0114.1	0.18
MA0115.1	MA0115.1	0.227
MA0116.1	MA0116.1	0.0525
MA0117.1	MA0117.1	0.018
MA0119.1	MA0119.1	0.173
MA0122.1	MA0122.1	0.394
MA0124.1	MA0124.1	0.449
MA0125.1	MA0125.1	0.48
MA0131.1	MA0131.1	0.907
MA0135.1	MA0135.1	0.28
MA0136.1	MA0136.1	3.8202e-12
MA0137.2	MA0137.2	0.0219
MA0138.2	MA0138.2	0.61
MA0139.1	MA0139.1	0.016
MA0140.1	MA0140.1	0.022
MA0141.1	MA0141.1	0.241
MA0142.1	MA0142.1	0.131
MA0143.1	MA0143.1	0.347
MA0144.1	MA0144.1	0.0632
MA0145.1	MA0145.1	0.972
MA0146.1	MA0146.1	0.762
MA0147.1	MA0147.1	0.0813
MA0148.1	MA0148.1	0.0466
MA0149.1	MA0149.1	0.72
MA0150.1	MA0150.1	6.90444e-5
MA0152.1	MA0152.1	0.922
MA0153.1	MA0153.1	0.369
MA0154.1	MA0154.1	0.00263
MA0155.1	MA0155.1	0.285
MA0156.1	MA0156.1	2.66494e-13
MA0157.1	MA0157.1	0.72
MA0159.1	MA0159.1	0.126
MA0160.1	MA0160.1	0.123
MA0162.1	MA0162.1	0.558
MA0163.1	MA0163.1	0.00359
MA0164.1	MA0164.1	0.422
MA0258.1	MA0258.1	0.0798
MA0259.1	MA0259.1	0.6

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12811

Novel motif	Logo	P-value
1	1	0.46
10	10	0.127
100	100	0.739
101	101	0.435
102	102	0.373
103	103	0.681
104	104	0.837
105	105	0.574
106	106	0.763
107	107	0.663
108	108	0.713
109	109	0.552
11	11	0.456
110	110	0.801
111	111	0.66
112	112	0.507
113	113	0.0175
114	114	0.932
115	115	0.319
116	116	0.87
117	117	0.448
118	118	0.768
119	119	0.844
12	12	0.0833
120	120	0.113
121	121	0.672
122	122	0.251
123	123	0.112
124	124	0.00295
125	125	0.956
126	126	0.512
127	127	0.783
128	128	0.359
129	129	0.729
13	13	0.386
130	130	0.257
131	131	0.863
132	132	0.0115
133	133	0.0936
134	134	0.282
135	135	0.213
136	136	0.0352
137	137	0.0204
138	138	0.511
139	139	0.594
14	14	0.786
140	140	0.278
141	141	0.424
142	142	0.512
143	143	0.0183
144	144	0.383
145	145	0.957
146	146	0.956
147	147	0.385
148	148	0.179
149	149	0.932
15	15	0.129
150	150	0.732
151	151	0.987
152	152	0.167
153	153	0.579
154	154	0.643
155	155	0.277
156	156	0.245
157	157	0.923
158	158	0.0514
159	159	0.31
16	16	0.467
160	160	0.906
161	161	0.19
162	162	0.139
163	163	0.956
164	164	0.896
165	165	0.443
166	166	0.104
167	167	0.634
168	168	0.946
169	169	0.823
17	17	0.918
18	18	0.318
19	19	0.443
2	2	0.432
20	20	0.391
21	21	0.242
22	22	0.58
23	23	0.139
24	24	0.107
25	25	0.252
26	26	0.752
27	27	0.596
28	28	0.978
29	29	0.46
3	3	0.914
30	30	0.568
31	31	0.717
32	32	0.931
33	33	0.797
34	34	0.0614
35	35	0.229
36	36	0.00527
37	37	0.811
38	38	0.753
39	39	0.365
4	4	0.104
40	40	0.0197
41	41	0.0993
42	42	0.489
43	43	0.272
44	44	0.149
45	45	0.552
46	46	0.609
47	47	0.225
48	48	0.921
49	49	0.0429
5	5	0.182
50	50	0.72
51	51	0.847
52	52	0.511
53	53	0.0507
54	54	0.816
55	55	0.578
56	56	0.821
57	57	0.757
58	58	0.44
59	59	0.194
6	6	0.544
60	60	0.544
61	61	0.186
62	62	0.188
63	63	0.783
64	64	0.279
65	65	0.907
66	66	0.265
67	67	0.26
68	68	0.698
69	69	0.164
7	7	0.187
70	70	0.636
71	71	0.664
72	72	0.774
73	73	0.168
74	74	0.0137
75	75	0.475
76	76	0.566
77	77	0.678
78	78	0.427
79	79	0.993
8	8	0.412
80	80	0.209
81	81	0.874
82	82	0.467
83	83	0.186
84	84	0.0308
85	85	0.886
86	86	0.379
87	87	0.422
88	88	0.89
89	89	0.881
9	9	0.313
90	90	0.616
91	91	0.921
92	92	0.915
93	93	0.771
94	94	0.171
95	95	0.0716
96	96	0.347
97	97	0.894
98	98	0.791
99	99	0.395

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12811

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000278 human salivary acinar cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000150 (glandular epithelial cell)
0000154 (protein secreting cell)
0000255 (eukaryotic cell)
0000622 (acinar cell)
0002076 (endo-epithelial cell)
0002251 (epithelial cell of alimentary canal)
0002623 (acinar cell of salivary gland)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001044 (saliva-secreting gland)
0000033 (head)
0001007 (digestive system)
0004121 (ectoderm-derived structure)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000161 (orifice)
0001444 (subdivision of head)
0002553 (anatomical cavity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003293 (gland of oral region)
0003294 (gland of foregut)
0002365 (exocrine gland)
0000464 (anatomical space)
0002530 (gland)
0010047 (oral gland)
0003408 (gland of gut)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001004 (respiratory system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000165 (mouth)
0001041 (foregut)
0000166 (oral opening)
0000167 (oral cavity)
0002330 (exocrine system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000278 (human salivary acinar cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000223 (endodermal cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000153,UBERON:0000161,UBERON:0000165,UBERON:0000166,UBERON:0000167,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0000930,UBERON:0001004,UBERON:0001007,UBERON:0001041,UBERON:0001044,UBERON:0001062,UBERON:0001444,UBERON:0001555,UBERON:0002050,UBERON:0002530,UBERON:0002532,UBERON:0002553,UBERON:0003104,UBERON:0003293,UBERON:0003294,UBERON:0003408,UBERON:0004111,UBERON:0004119,UBERON:0004120,UBERON:0004185,UBERON:0004921,UBERON:0005423,UBERON:0007026,UBERON:0009142
+|DRA_sample_Accession=CAGE@SAMD00005311
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000144,CL:0000150,CL:0000151,CL:0000154,CL:0000255,CL:0000548,CL:0000622,CL:0002371,CL:0002623
+|accession_numbers=CAGE;DRX008574;DRR009446;DRZ000871;DRZ002256;DRZ012221;DRZ013606
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001044,UBERON:0000033,UBERON:0001007,UBERON:0004121,UBERON:0004119,UBERON:0011216,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000161,UBERON:0001444,UBERON:0002553,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003293,UBERON:0003294,UBERON:0002365,UBERON:0000464,UBERON:0002530,UBERON:0010047,UBERON:0003408,UBERON:0010317,UBERON:0001555,UBERON:0001004,UBERON:0000153,UBERON:0007811,UBERON:0000165,UBERON:0001041,UBERON:0000166,UBERON:0000167,UBERON:0002330
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000151,CL:0000066,CL:0002371,CL:0000150,CL:0000154,CL:0000255,CL:0000622,CL:0002076,CL:0002251,CL:0002623
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000278
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000151;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000154;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000223;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000622;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002251;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002623;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000161;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000165;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000166;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001044;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002365
+|ffid_belonging_in_development=CL:0000223
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 34: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/salivary%2520acinar%2520cells%252c%2520donor2.CNhs12811.11772-123I8.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/salivary%2520acinar%2520cells%252c%2520donor2.CNhs12811.11772-123I8.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/salivary%2520acinar%2520cells%252c%2520donor2.CNhs12811.11772-123I8.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/salivary%2520acinar%2520cells%252c%2520donor2.CNhs12811.11772-123I8.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/salivary%2520acinar%2520cells%252c%2520donor2.CNhs12811.11772-123I8.hg38.nobarcode.ctss.bed.gz
 |id=FF:11772-123I8
-|is_a=EFO:0002091;;FF:0000002;;FF:0000210;;FF:0000278
+|is_a=EFO:0002091;;FF:0000278
+|is_obsolete=
+|library_id=CNhs12811
+|library_id_phase_based=2:CNhs12811
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11772
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11772
 |name=salivary acinar cells, donor2
 |namespace=FANTOM5
@@ Line 41: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs12811,LSID972,release012,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
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 |rna_box=123
 |rna_catalog_number=
@@ Line 56: / Line 79: @@
 |rna_weight_ug=64.44
 |sample_age=49
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 68: / Line 92: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.54715479505758e-249!GO:0043226;organelle;2.98184706299216e-198!GO:0043229;intracellular organelle;1.08932221841738e-197!GO:0043231;intracellular membrane-bound organelle;9.48837395904905e-186!GO:0043227;membrane-bound organelle;1.70824611577453e-185!GO:0005737;cytoplasm;2.59623423134312e-179!GO:0044422;organelle part;5.95848206240425e-127!GO:0044446;intracellular organelle part;1.19009864409363e-125!GO:0044444;cytoplasmic part;3.09633132377172e-115!GO:0044237;cellular metabolic process;6.13063961322374e-90!GO:0044238;primary metabolic process;9.00929255573138e-90!GO:0032991;macromolecular complex;4.09045464978745e-85!GO:0043170;macromolecule metabolic process;6.40861009371237e-83!GO:0005634;nucleus;5.07560603917788e-79!GO:0005515;protein binding;6.76090693923579e-78!GO:0030529;ribonucleoprotein complex;2.44484884909793e-77!GO:0043233;organelle lumen;1.97180006193422e-70!GO:0031974;membrane-enclosed lumen;1.97180006193422e-70!GO:0044428;nuclear part;6.39876994045064e-67!GO:0003723;RNA binding;6.42095784772708e-62!GO:0005739;mitochondrion;9.52713686471747e-62!GO:0043283;biopolymer metabolic process;1.11822395521691e-51!GO:0010467;gene expression;1.93477684612626e-48!GO:0016043;cellular component organization and biogenesis;9.60843258469391e-47!GO:0019538;protein metabolic process;3.71592211223834e-46!GO:0006396;RNA processing;8.52830155640234e-46!GO:0031090;organelle membrane;1.99638965097496e-45!GO:0005840;ribosome;5.91604088129097e-45!GO:0031981;nuclear lumen;2.40317818013007e-44!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.64653992292503e-43!GO:0006412;translation;5.86649294296758e-43!GO:0033036;macromolecule localization;1.82314467828766e-42!GO:0015031;protein transport;2.75499687865881e-42!GO:0044429;mitochondrial part;9.22084430782959e-42!GO:0043234;protein complex;2.56561993621099e-41!GO:0044260;cellular macromolecule metabolic process;2.08122532790212e-40!GO:0044267;cellular protein metabolic process;3.18144773838738e-40!GO:0003735;structural constituent of ribosome;2.8625000248015e-39!GO:0008104;protein localization;3.35791064415485e-39!GO:0045184;establishment of protein localization;4.03644965385751e-39!GO:0016071;mRNA metabolic process;1.79177081639783e-37!GO:0005829;cytosol;1.50001908818175e-36!GO:0031967;organelle envelope;2.87249273572002e-35!GO:0031975;envelope;5.08721580627746e-35!GO:0008380;RNA splicing;9.73059611746369e-35!GO:0046907;intracellular transport;1.04603832479219e-34!GO:0009058;biosynthetic process;1.09571333184643e-34!GO:0033279;ribosomal subunit;1.34879433888892e-34!GO:0043228;non-membrane-bound organelle;3.19069923739042e-33!GO:0043232;intracellular non-membrane-bound organelle;3.19069923739042e-33!GO:0044249;cellular biosynthetic process;8.07383569059866e-33!GO:0065003;macromolecular complex assembly;1.07036191616022e-32!GO:0009059;macromolecule biosynthetic process;6.44238724280126e-32!GO:0006397;mRNA processing;1.17218913432046e-31!GO:0006886;intracellular protein transport;1.93766981586374e-30!GO:0022607;cellular component assembly;1.7037622427702e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.64481017905507e-27!GO:0005654;nucleoplasm;2.03409696819425e-27!GO:0003676;nucleic acid binding;7.75002388915412e-27!GO:0006996;organelle organization and biogenesis;1.00892491009775e-26!GO:0005740;mitochondrial envelope;1.42081330491216e-26!GO:0016070;RNA metabolic process;1.28434138794933e-25!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.64233032184359e-25!GO:0031966;mitochondrial membrane;2.74081608524069e-25!GO:0019866;organelle inner membrane;8.20049348529265e-25!GO:0005681;spliceosome;1.77420358776006e-24!GO:0005743;mitochondrial inner membrane;2.01000027866126e-23!GO:0044451;nucleoplasm part;3.56818426109597e-23!GO:0006259;DNA metabolic process;5.49058114586929e-23!GO:0051641;cellular localization;1.46049229336498e-21!GO:0051649;establishment of cellular localization;1.74362281626417e-21!GO:0044445;cytosolic part;2.18166812677684e-21!GO:0006119;oxidative phosphorylation;9.23546474158607e-21!GO:0044455;mitochondrial membrane part;2.77927564984041e-19!GO:0008134;transcription factor binding;4.51868294551776e-19!GO:0000166;nucleotide binding;5.03697675771952e-19!GO:0031980;mitochondrial lumen;5.91402274068646e-19!GO:0005759;mitochondrial matrix;5.91402274068646e-19!GO:0005730;nucleolus;1.34983193666581e-18!GO:0015934;large ribosomal subunit;1.76089932683786e-18!GO:0048770;pigment granule;2.18939300320508e-18!GO:0042470;melanosome;2.18939300320508e-18!GO:0012505;endomembrane system;1.69858191486622e-17!GO:0015935;small ribosomal subunit;4.7533871212227e-17!GO:0006457;protein folding;7.18343221730214e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.51501462132059e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;9.70167516154266e-17!GO:0016462;pyrophosphatase activity;1.0507670281319e-16!GO:0006512;ubiquitin cycle;1.21947146605962e-16!GO:0006605;protein targeting;2.61091478081675e-16!GO:0022618;protein-RNA complex assembly;2.7359008803975e-16!GO:0016874;ligase activity;3.70301797564431e-16!GO:0017111;nucleoside-triphosphatase activity;1.0438778827542e-15!GO:0005746;mitochondrial respiratory chain;1.53767788651494e-15!GO:0005783;endoplasmic reticulum;3.5714089813751e-15!GO:0006974;response to DNA damage stimulus;5.78643351783645e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.79136001535871e-15!GO:0008135;translation factor activity, nucleic acid binding;1.12586030667948e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.17095242664954e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.67773077188965e-14!GO:0044265;cellular macromolecule catabolic process;2.10065028324819e-14!GO:0043285;biopolymer catabolic process;2.10065028324819e-14!GO:0019941;modification-dependent protein catabolic process;2.3219258069283e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.3219258069283e-14!GO:0044257;cellular protein catabolic process;2.81216702414005e-14!GO:0007049;cell cycle;2.86730903659973e-14!GO:0048193;Golgi vesicle transport;3.3574805236828e-14!GO:0043412;biopolymer modification;4.74072729293914e-14!GO:0051186;cofactor metabolic process;7.01647914370975e-14!GO:0050136;NADH dehydrogenase (quinone) activity;7.29080410615808e-14!GO:0003954;NADH dehydrogenase activity;7.29080410615808e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.29080410615808e-14!GO:0005794;Golgi apparatus;8.77139033123578e-14!GO:0044432;endoplasmic reticulum part;1.00573752450768e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.89207858775365e-13!GO:0016604;nuclear body;3.68882828552543e-13!GO:0005761;mitochondrial ribosome;6.58092471643965e-13!GO:0000313;organellar ribosome;6.58092471643965e-13!GO:0050794;regulation of cellular process;6.68846239118083e-13!GO:0012501;programmed cell death;6.79969550851372e-13!GO:0000502;proteasome complex (sensu Eukaryota);8.1167364733644e-13!GO:0017076;purine nucleotide binding;8.87985446930918e-13!GO:0006915;apoptosis;1.06563898404462e-12!GO:0006366;transcription from RNA polymerase II promoter;1.23761958387987e-12!GO:0032553;ribonucleotide binding;1.59089193617407e-12!GO:0032555;purine ribonucleotide binding;1.59089193617407e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.59207593717181e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.75353894129693e-12!GO:0006464;protein modification process;1.78960609082138e-12!GO:0030163;protein catabolic process;1.81840227436727e-12!GO:0009057;macromolecule catabolic process;2.48152064956878e-12!GO:0006461;protein complex assembly;3.07849064726267e-12!GO:0042254;ribosome biogenesis and assembly;3.78089982415663e-12!GO:0006732;coenzyme metabolic process;4.59155717535652e-12!GO:0042775;organelle ATP synthesis coupled electron transport;5.18953123046865e-12!GO:0042773;ATP synthesis coupled electron transport;5.18953123046865e-12!GO:0051082;unfolded protein binding;6.31674439634481e-12!GO:0030964;NADH dehydrogenase complex (quinone);7.25851335852658e-12!GO:0045271;respiratory chain complex I;7.25851335852658e-12!GO:0005747;mitochondrial respiratory chain complex I;7.25851335852658e-12!GO:0003712;transcription cofactor activity;8.06622783105153e-12!GO:0006913;nucleocytoplasmic transport;8.72098446401761e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;8.83089685616436e-12!GO:0000375;RNA splicing, via transesterification reactions;8.83089685616436e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.83089685616436e-12!GO:0044248;cellular catabolic process;1.08037749406959e-11!GO:0043687;post-translational protein modification;1.36698939580853e-11!GO:0008219;cell death;1.50571673993621e-11!GO:0016265;death;1.50571673993621e-11!GO:0006281;DNA repair;1.54905553088553e-11!GO:0048523;negative regulation of cellular process;1.7641129844593e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.92556166813842e-11!GO:0051169;nuclear transport;1.96681249815124e-11!GO:0003743;translation initiation factor activity;2.26334501393669e-11!GO:0016192;vesicle-mediated transport;2.40038223972533e-11!GO:0016607;nuclear speck;2.50326205484924e-11!GO:0017038;protein import;4.04126733404372e-11!GO:0008565;protein transporter activity;7.55133635366432e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.59878320497149e-10!GO:0005789;endoplasmic reticulum membrane;1.71064051653438e-10!GO:0009719;response to endogenous stimulus;2.90679127436322e-10!GO:0006446;regulation of translational initiation;3.63968447812867e-10!GO:0005524;ATP binding;4.94286010147429e-10!GO:0048519;negative regulation of biological process;5.67741396413245e-10!GO:0030554;adenyl nucleotide binding;7.97011471281719e-10!GO:0008639;small protein conjugating enzyme activity;8.57325012005075e-10!GO:0051726;regulation of cell cycle;8.59553724054232e-10!GO:0006413;translational initiation;8.78266310427721e-10!GO:0000074;regulation of progression through cell cycle;1.01537231941891e-09!GO:0032559;adenyl ribonucleotide binding;1.10978646667531e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.1518959599991e-09!GO:0031965;nuclear membrane;1.31351971639958e-09!GO:0004842;ubiquitin-protein ligase activity;1.71635928743769e-09!GO:0022402;cell cycle process;1.71635928743769e-09!GO:0005793;ER-Golgi intermediate compartment;1.77976518656338e-09!GO:0005635;nuclear envelope;2.26544283554358e-09!GO:0009055;electron carrier activity;3.10784376013116e-09!GO:0005768;endosome;3.79311604543403e-09!GO:0006323;DNA packaging;3.89680398607228e-09!GO:0006399;tRNA metabolic process;5.500871774732e-09!GO:0050789;regulation of biological process;5.54590113259889e-09!GO:0051276;chromosome organization and biogenesis;6.06978813590159e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.38392385430787e-09!GO:0009259;ribonucleotide metabolic process;7.57020040610192e-09!GO:0019787;small conjugating protein ligase activity;9.18753833806104e-09!GO:0006163;purine nucleotide metabolic process;9.46122366106367e-09!GO:0016887;ATPase activity;9.49310169552305e-09!GO:0044453;nuclear membrane part;9.85565033584474e-09!GO:0016564;transcription repressor activity;1.02207876452657e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.81130580652697e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.10664404282052e-08!GO:0043566;structure-specific DNA binding;2.23348229738327e-08!GO:0009150;purine ribonucleotide metabolic process;2.8531461747139e-08!GO:0045786;negative regulation of progression through cell cycle;2.91334891441359e-08!GO:0006164;purine nucleotide biosynthetic process;3.0448690289588e-08!GO:0019222;regulation of metabolic process;3.08827518475084e-08!GO:0031324;negative regulation of cellular metabolic process;3.64042727468056e-08!GO:0042981;regulation of apoptosis;3.97772714655224e-08!GO:0048475;coated membrane;4.14101419991573e-08!GO:0030117;membrane coat;4.14101419991573e-08!GO:0006260;DNA replication;4.65048687230829e-08!GO:0009060;aerobic respiration;4.80635734236746e-08!GO:0009260;ribonucleotide biosynthetic process;5.06151930912693e-08!GO:0042623;ATPase activity, coupled;5.06151930912693e-08!GO:0043067;regulation of programmed cell death;5.32156868703501e-08!GO:0015986;ATP synthesis coupled proton transport;5.55715583905547e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.55715583905547e-08!GO:0006364;rRNA processing;6.29554839359117e-08!GO:0004386;helicase activity;6.97044035648462e-08!GO:0030120;vesicle coat;8.07616512409076e-08!GO:0030662;coated vesicle membrane;8.07616512409076e-08!GO:0045333;cellular respiration;8.32576862342405e-08!GO:0009152;purine ribonucleotide biosynthetic process;8.62171487497171e-08!GO:0016072;rRNA metabolic process;9.62209312786097e-08!GO:0005643;nuclear pore;1.00925389686845e-07!GO:0016881;acid-amino acid ligase activity;1.05692703396603e-07!GO:0006606;protein import into nucleus;1.21719448760786e-07!GO:0051170;nuclear import;1.29533131157436e-07!GO:0051188;cofactor biosynthetic process;1.36948026343888e-07!GO:0006916;anti-apoptosis;1.37139567738958e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.65537703674374e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.65537703674374e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.65537703674374e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.65537703674374e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.65537703674374e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.67916804262872e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.67916804262872e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.82667926901471e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.82667926901471e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.82667926901471e-07!GO:0009141;nucleoside triphosphate metabolic process;1.873438809619e-07!GO:0043069;negative regulation of programmed cell death;2.0792323528785e-07!GO:0043066;negative regulation of apoptosis;2.70104905100338e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.82055577256233e-07!GO:0016568;chromatin modification;2.88003925242743e-07!GO:0016481;negative regulation of transcription;3.12612584640051e-07!GO:0009056;catabolic process;3.37678786685522e-07!GO:0043038;amino acid activation;4.15568090886365e-07!GO:0006418;tRNA aminoacylation for protein translation;4.15568090886365e-07!GO:0043039;tRNA aminoacylation;4.15568090886365e-07!GO:0009892;negative regulation of metabolic process;5.21970580428065e-07!GO:0007005;mitochondrion organization and biogenesis;6.12600872993451e-07!GO:0006888;ER to Golgi vesicle-mediated transport;7.19832701117306e-07!GO:0019829;cation-transporting ATPase activity;7.41307849106881e-07!GO:0003714;transcription corepressor activity;7.80318779212393e-07!GO:0003697;single-stranded DNA binding;7.94838647100037e-07!GO:0065002;intracellular protein transport across a membrane;7.94838647100037e-07!GO:0030532;small nuclear ribonucleoprotein complex;8.02804405648906e-07!GO:0006754;ATP biosynthetic process;9.39984222109809e-07!GO:0006753;nucleoside phosphate metabolic process;9.39984222109809e-07!GO:0050657;nucleic acid transport;9.39984222109809e-07!GO:0051236;establishment of RNA localization;9.39984222109809e-07!GO:0050658;RNA transport;9.39984222109809e-07!GO:0043623;cellular protein complex assembly;9.41402513222236e-07!GO:0016469;proton-transporting two-sector ATPase complex;9.50336017845755e-07!GO:0009109;coenzyme catabolic process;1.01896733487603e-06!GO:0003924;GTPase activity;1.06761784871603e-06!GO:0008026;ATP-dependent helicase activity;1.09880266351866e-06!GO:0032446;protein modification by small protein conjugation;1.12151516236622e-06!GO:0006099;tricarboxylic acid cycle;1.1468337981249e-06!GO:0046356;acetyl-CoA catabolic process;1.1468337981249e-06!GO:0046034;ATP metabolic process;1.18288201797205e-06!GO:0006403;RNA localization;1.22663517273006e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.29082584764968e-06!GO:0016567;protein ubiquitination;1.32822041337291e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.33637731234968e-06!GO:0031988;membrane-bound vesicle;1.38196806999184e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.43205478127242e-06!GO:0005667;transcription factor complex;1.7045404734022e-06!GO:0000245;spliceosome assembly;1.75841263479172e-06!GO:0065004;protein-DNA complex assembly;1.90395536478765e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.9364846778997e-06!GO:0016491;oxidoreductase activity;1.9364846778997e-06!GO:0009108;coenzyme biosynthetic process;2.12408726736263e-06!GO:0006752;group transfer coenzyme metabolic process;2.2157236873169e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.53543265493986e-06!GO:0006333;chromatin assembly or disassembly;2.7068121365555e-06!GO:0046930;pore complex;3.04184486953596e-06!GO:0051246;regulation of protein metabolic process;3.24079779720437e-06!GO:0006084;acetyl-CoA metabolic process;3.28928645054027e-06!GO:0051427;hormone receptor binding;3.33383161071802e-06!GO:0006793;phosphorus metabolic process;3.41553792172735e-06!GO:0006796;phosphate metabolic process;3.41553792172735e-06!GO:0044431;Golgi apparatus part;3.6353789682593e-06!GO:0005694;chromosome;3.84031657637756e-06!GO:0051187;cofactor catabolic process;4.92386723680192e-06!GO:0031323;regulation of cellular metabolic process;4.93279315076725e-06!GO:0016740;transferase activity;4.95504353953232e-06!GO:0045259;proton-transporting ATP synthase complex;6.22706787686188e-06!GO:0035257;nuclear hormone receptor binding;7.66035278676147e-06!GO:0003713;transcription coactivator activity;7.73026035056357e-06!GO:0006350;transcription;9.46519021376392e-06!GO:0000278;mitotic cell cycle;1.09819160959371e-05!GO:0000151;ubiquitin ligase complex;1.10834337845105e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.13077185650158e-05!GO:0044440;endosomal part;1.21478934784741e-05!GO:0010008;endosome membrane;1.21478934784741e-05!GO:0065007;biological regulation;1.30569522116958e-05!GO:0005798;Golgi-associated vesicle;1.40814020375086e-05!GO:0031252;leading edge;2.05651707002319e-05!GO:0005770;late endosome;2.09302594659197e-05!GO:0005525;GTP binding;2.30249653933986e-05!GO:0051028;mRNA transport;2.47841695055515e-05!GO:0016563;transcription activator activity;2.54515109705543e-05!GO:0008654;phospholipid biosynthetic process;3.13025972922564e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.47727027976106e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.56066336028846e-05!GO:0031982;vesicle;3.6681015754845e-05!GO:0005762;mitochondrial large ribosomal subunit;3.73797258926563e-05!GO:0000315;organellar large ribosomal subunit;3.73797258926563e-05!GO:0009117;nucleotide metabolic process;3.76008343743956e-05!GO:0005773;vacuole;3.81641236808026e-05!GO:0010468;regulation of gene expression;4.49854514975683e-05!GO:0016310;phosphorylation;4.517984306575e-05!GO:0045892;negative regulation of transcription, DNA-dependent;4.52896631926633e-05!GO:0003724;RNA helicase activity;4.68037389031632e-05!GO:0005839;proteasome core complex (sensu Eukaryota);5.08131155596449e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.14206969629716e-05!GO:0048471;perinuclear region of cytoplasm;5.26354507242554e-05!GO:0000785;chromatin;5.28872892346265e-05!GO:0005769;early endosome;5.44401504162136e-05!GO:0031410;cytoplasmic vesicle;5.44856255607381e-05!GO:0044427;chromosomal part;5.87231023697588e-05!GO:0003690;double-stranded DNA binding;6.17714416134798e-05!GO:0016779;nucleotidyltransferase activity;6.27751476363901e-05!GO:0006613;cotranslational protein targeting to membrane;7.06894536965136e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.08641076352702e-05!GO:0000139;Golgi membrane;7.61150639218184e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;8.2423264568413e-05!GO:0015980;energy derivation by oxidation of organic compounds;9.59341458116102e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000107176538472365!GO:0030133;transport vesicle;0.000107883769499181!GO:0016859;cis-trans isomerase activity;0.000110926860224205!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00011818520890968!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000122569139277009!GO:0006091;generation of precursor metabolites and energy;0.00012978466091924!GO:0008361;regulation of cell size;0.00013817324490754!GO:0000323;lytic vacuole;0.000184007408582473!GO:0005764;lysosome;0.000184007408582473!GO:0005788;endoplasmic reticulum lumen;0.000186505661790206!GO:0043021;ribonucleoprotein binding;0.000190393117698616!GO:0005813;centrosome;0.000193104772260322!GO:0032774;RNA biosynthetic process;0.000193442133770703!GO:0006351;transcription, DNA-dependent;0.000203906851039547!GO:0016197;endosome transport;0.000206998733850899!GO:0016787;hydrolase activity;0.000214255791202902!GO:0016049;cell growth;0.000218677080822508!GO:0004298;threonine endopeptidase activity;0.000254666816873887!GO:0030118;clathrin coat;0.000290768722418719!GO:0051789;response to protein stimulus;0.000300042647040706!GO:0006986;response to unfolded protein;0.000300042647040706!GO:0042802;identical protein binding;0.000307641280921335!GO:0019899;enzyme binding;0.000326404725421257!GO:0032561;guanyl ribonucleotide binding;0.00035460703933182!GO:0019001;guanyl nucleotide binding;0.00035460703933182!GO:0033116;ER-Golgi intermediate compartment membrane;0.000375658811573696!GO:0048522;positive regulation of cellular process;0.00038483493672426!GO:0006402;mRNA catabolic process;0.00040677788144619!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000407931969014813!GO:0035258;steroid hormone receptor binding;0.000418152776164771!GO:0007243;protein kinase cascade;0.000460819806982678!GO:0019867;outer membrane;0.000465557748333729!GO:0031497;chromatin assembly;0.000484280029929855!GO:0016853;isomerase activity;0.000515347348594401!GO:0003729;mRNA binding;0.000522676821957407!GO:0030132;clathrin coat of coated pit;0.000524891922447702!GO:0031968;organelle outer membrane;0.000559559693533525!GO:0005815;microtubule organizing center;0.000561035680819924!GO:0007050;cell cycle arrest;0.000563172055330571!GO:0050662;coenzyme binding;0.000563172055330571!GO:0006334;nucleosome assembly;0.000595917630137053!GO:0005741;mitochondrial outer membrane;0.000601816298865839!GO:0000314;organellar small ribosomal subunit;0.000601816298865839!GO:0005763;mitochondrial small ribosomal subunit;0.000601816298865839!GO:0006612;protein targeting to membrane;0.000620874456155518!GO:0045893;positive regulation of transcription, DNA-dependent;0.000629258360248782!GO:0030867;rough endoplasmic reticulum membrane;0.000633092031655983!GO:0051252;regulation of RNA metabolic process;0.000634679815884627!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000672253761190121!GO:0003899;DNA-directed RNA polymerase activity;0.000697959693509094!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000698958264458679!GO:0005048;signal sequence binding;0.000727147002390784!GO:0045454;cell redox homeostasis;0.000815912963307284!GO:0016363;nuclear matrix;0.000821977111242029!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000836166822462076!GO:0015630;microtubule cytoskeleton;0.000836457877850791!GO:0001558;regulation of cell growth;0.00085831055854506!GO:0030119;AP-type membrane coat adaptor complex;0.00085831055854506!GO:0008186;RNA-dependent ATPase activity;0.000914213788471142!GO:0019843;rRNA binding;0.000971395790121309!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00100889244477573!GO:0046474;glycerophospholipid biosynthetic process;0.00100889244477573!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00100889244477573!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00100889244477573!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00100889244477573!GO:0065009;regulation of a molecular function;0.0010239830849946!GO:0045449;regulation of transcription;0.00103612047045494!GO:0043681;protein import into mitochondrion;0.00105866762218762!GO:0005885;Arp2/3 protein complex;0.00107795475286294!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00112797043097449!GO:0040008;regulation of growth;0.00121465527468333!GO:0008250;oligosaccharyl transferase complex;0.00122286055498277!GO:0006261;DNA-dependent DNA replication;0.00129419472955133!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00139667029017796!GO:0008092;cytoskeletal protein binding;0.00142598857919449!GO:0051168;nuclear export;0.00142598857919449!GO:0051920;peroxiredoxin activity;0.00146822590476007!GO:0004576;oligosaccharyl transferase activity;0.0016140781722277!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0016140781722277!GO:0030658;transport vesicle membrane;0.00169161067430025!GO:0030131;clathrin adaptor complex;0.00171959627598775!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00172373345422943!GO:0006414;translational elongation;0.00174329866503966!GO:0030663;COPI coated vesicle membrane;0.0017813823115478!GO:0030126;COPI vesicle coat;0.0017813823115478!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00184428070477175!GO:0051301;cell division;0.00188955044262996!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00208729857882157!GO:0008629;induction of apoptosis by intracellular signals;0.00215548162451065!GO:0030027;lamellipodium;0.00215727296398273!GO:0006891;intra-Golgi vesicle-mediated transport;0.00217390878924303!GO:0045941;positive regulation of transcription;0.00218177455220459!GO:0045926;negative regulation of growth;0.00220788936458463!GO:0046489;phosphoinositide biosynthetic process;0.00224761704478528!GO:0005905;coated pit;0.00239187785788186!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00247168678102917!GO:0051287;NAD binding;0.00249774248031457!GO:0004004;ATP-dependent RNA helicase activity;0.00255532018856179!GO:0043488;regulation of mRNA stability;0.00256826456455265!GO:0043487;regulation of RNA stability;0.00256826456455265!GO:0051128;regulation of cellular component organization and biogenesis;0.00262789933351165!GO:0006892;post-Golgi vesicle-mediated transport;0.00268429110871899!GO:0008139;nuclear localization sequence binding;0.00270212407607553!GO:0004177;aminopeptidase activity;0.00270853898086055!GO:0030137;COPI-coated vesicle;0.002782723666714!GO:0008033;tRNA processing;0.00291456518708344!GO:0030521;androgen receptor signaling pathway;0.00291514055603969!GO:0003711;transcription elongation regulator activity;0.00292992799025582!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00300875854207571!GO:0022403;cell cycle phase;0.00304898261675927!GO:0006839;mitochondrial transport;0.00313989322099446!GO:0030176;integral to endoplasmic reticulum membrane;0.00313989322099446!GO:0000087;M phase of mitotic cell cycle;0.00318286313682642!GO:0030518;steroid hormone receptor signaling pathway;0.00331518148623008!GO:0000059;protein import into nucleus, docking;0.00341565786317864!GO:0008610;lipid biosynthetic process;0.0034218143762696!GO:0030057;desmosome;0.00344162844370554!GO:0048468;cell development;0.00344264132425674!GO:0007006;mitochondrial membrane organization and biogenesis;0.00350723166022971!GO:0006626;protein targeting to mitochondrion;0.00353208939653589!GO:0009165;nucleotide biosynthetic process;0.00361611613475117!GO:0008286;insulin receptor signaling pathway;0.00368493573727941!GO:0018196;peptidyl-asparagine modification;0.00368493573727941!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00368493573727941!GO:0030036;actin cytoskeleton organization and biogenesis;0.00368493573727941!GO:0045792;negative regulation of cell size;0.00369967007788345!GO:0006354;RNA elongation;0.00379610237008648!GO:0030032;lamellipodium biogenesis;0.00385892310498283!GO:0016044;membrane organization and biogenesis;0.00386296862525461!GO:0006950;response to stress;0.00388710025461875!GO:0006355;regulation of transcription, DNA-dependent;0.00395558897701692!GO:0006289;nucleotide-excision repair;0.00401275489303657!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00401275489303657!GO:0007067;mitosis;0.00411069896274592!GO:0007264;small GTPase mediated signal transduction;0.00411069896274592!GO:0001726;ruffle;0.00420684859308037!GO:0006401;RNA catabolic process;0.00429354908327355!GO:0044452;nucleolar part;0.0043063282034465!GO:0033673;negative regulation of kinase activity;0.00436345275473323!GO:0006469;negative regulation of protein kinase activity;0.00436345275473323!GO:0003684;damaged DNA binding;0.00436345275473323!GO:0008168;methyltransferase activity;0.00439368224067875!GO:0030308;negative regulation of cell growth;0.00439368224067875!GO:0016251;general RNA polymerase II transcription factor activity;0.00444092771334204!GO:0016741;transferase activity, transferring one-carbon groups;0.00459711032706257!GO:0030125;clathrin vesicle coat;0.00495261668340166!GO:0030665;clathrin coated vesicle membrane;0.00495261668340166!GO:0007034;vacuolar transport;0.00508031119625646!GO:0030660;Golgi-associated vesicle membrane;0.00508031119625646!GO:0006352;transcription initiation;0.00535389577975228!GO:0046467;membrane lipid biosynthetic process;0.00544261955826937!GO:0017166;vinculin binding;0.00564382497053889!GO:0003682;chromatin binding;0.00573601022362913!GO:0007010;cytoskeleton organization and biogenesis;0.00598747222612727!GO:0006650;glycerophospholipid metabolic process;0.00615583558773398!GO:0051098;regulation of binding;0.00629340102169547!GO:0051329;interphase of mitotic cell cycle;0.00642077226004142!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00644694162349793!GO:0051101;regulation of DNA binding;0.00652998947949664!GO:0051348;negative regulation of transferase activity;0.00653770962939444!GO:0005869;dynactin complex;0.00690070772168664!GO:0051539;4 iron, 4 sulfur cluster binding;0.0069453619120162!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00697332294526375!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00717405548628961!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00717921333245344!GO:0015399;primary active transmembrane transporter activity;0.00717921333245344!GO:0004674;protein serine/threonine kinase activity;0.00755842905772476!GO:0030384;phosphoinositide metabolic process;0.00764300136616923!GO:0043022;ribosome binding;0.00782861591275637!GO:0015631;tubulin binding;0.00792022960591469!GO:0005856;cytoskeleton;0.00819684660326601!GO:0048500;signal recognition particle;0.00820340354926158!GO:0030031;cell projection biogenesis;0.00843530824827784!GO:0048037;cofactor binding;0.00872204056719006!GO:0006643;membrane lipid metabolic process;0.00892905122066721!GO:0006383;transcription from RNA polymerase III promoter;0.00895853181267998!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00918276319273827!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00918276319273827!GO:0009967;positive regulation of signal transduction;0.00923081242062226!GO:0022890;inorganic cation transmembrane transporter activity;0.00929811396141516!GO:0048487;beta-tubulin binding;0.00947014260149359!GO:0046822;regulation of nucleocytoplasmic transport;0.00949069925270454!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00960517462153039!GO:0003702;RNA polymerase II transcription factor activity;0.0104358536689148!GO:0016126;sterol biosynthetic process;0.0104863186228934!GO:0016408;C-acyltransferase activity;0.0110297382840277!GO:0048518;positive regulation of biological process;0.0110297382840277!GO:0003746;translation elongation factor activity;0.0112130449173851!GO:0008270;zinc ion binding;0.0114415844425953!GO:0051540;metal cluster binding;0.0115933505053157!GO:0051536;iron-sulfur cluster binding;0.0115933505053157!GO:0001533;cornified envelope;0.0117391682098042!GO:0007040;lysosome organization and biogenesis;0.0118862731809771!GO:0006509;membrane protein ectodomain proteolysis;0.0120705851381294!GO:0033619;membrane protein proteolysis;0.0120705851381294!GO:0007041;lysosomal transport;0.0120749538499996!GO:0051325;interphase;0.0121368136504716!GO:0006607;NLS-bearing substrate import into nucleus;0.0124928630324871!GO:0043065;positive regulation of apoptosis;0.0127597543533994!GO:0050681;androgen receptor binding;0.0128717609492676!GO:0008180;signalosome;0.0137571084161919!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0138708307963001!GO:0031901;early endosome membrane;0.0140941023919986!GO:0031625;ubiquitin protein ligase binding;0.0140946738028743!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0141642623012973!GO:0043068;positive regulation of programmed cell death;0.0143010006896683!GO:0030880;RNA polymerase complex;0.0145304908565653!GO:0046983;protein dimerization activity;0.0145304908565653!GO:0008022;protein C-terminus binding;0.0145515385090425!GO:0006979;response to oxidative stress;0.0145653110048564!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0149772293095542!GO:0006376;mRNA splice site selection;0.0150148611091125!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0150148611091125!GO:0008312;7S RNA binding;0.0151702880332155!GO:0030134;ER to Golgi transport vesicle;0.0153302783483892!GO:0016584;nucleosome positioning;0.015376105066589!GO:0006611;protein export from nucleus;0.0157892834320403!GO:0006338;chromatin remodeling;0.0157935572655558!GO:0051338;regulation of transferase activity;0.0158637664210774!GO:0031902;late endosome membrane;0.0158771823458671!GO:0008287;protein serine/threonine phosphatase complex;0.0158771823458671!GO:0045045;secretory pathway;0.0159959619712938!GO:0051087;chaperone binding;0.015997575902895!GO:0043414;biopolymer methylation;0.0163053954370548!GO:0006818;hydrogen transport;0.0168826487772416!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0169396569985133!GO:0045047;protein targeting to ER;0.0169396569985133!GO:0031072;heat shock protein binding;0.0171306502839391!GO:0015992;proton transport;0.0173140239267664!GO:0050790;regulation of catalytic activity;0.0173565304294238!GO:0006644;phospholipid metabolic process;0.0174655876784738!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0174954258798237!GO:0035035;histone acetyltransferase binding;0.017808439689024!GO:0030216;keratinocyte differentiation;0.0178266032693099!GO:0006695;cholesterol biosynthetic process;0.0184313868163436!GO:0000209;protein polyubiquitination;0.0188202701392312!GO:0030029;actin filament-based process;0.0193842594604061!GO:0043256;laminin complex;0.0193842594604061!GO:0005811;lipid particle;0.0194392978018318!GO:0030522;intracellular receptor-mediated signaling pathway;0.0194495444908211!GO:0006497;protein amino acid lipidation;0.0197451092527676!GO:0022415;viral reproductive process;0.0200735635048521!GO:0005684;U2-dependent spliceosome;0.0202485952279964!GO:0009116;nucleoside metabolic process;0.0202886425782458!GO:0042158;lipoprotein biosynthetic process;0.0204176596913556!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0204176596913556!GO:0015002;heme-copper terminal oxidase activity;0.0204176596913556!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0204176596913556!GO:0004129;cytochrome-c oxidase activity;0.0204176596913556!GO:0006506;GPI anchor biosynthetic process;0.0206905332207999!GO:0001952;regulation of cell-matrix adhesion;0.0206905332207999!GO:0046914;transition metal ion binding;0.020849175981116!GO:0046426;negative regulation of JAK-STAT cascade;0.020849175981116!GO:0004527;exonuclease activity;0.0212460764149309!GO:0030041;actin filament polymerization;0.021397613556944!GO:0030127;COPII vesicle coat;0.0216364177826934!GO:0012507;ER to Golgi transport vesicle membrane;0.0216364177826934!GO:0006672;ceramide metabolic process;0.0216918209164567!GO:0009112;nucleobase metabolic process;0.0217815033422418!GO:0006505;GPI anchor metabolic process;0.0217919450687892!GO:0007033;vacuole organization and biogenesis;0.021800695106347!GO:0051059;NF-kappaB binding;0.021800695106347!GO:0008333;endosome to lysosome transport;0.021800695106347!GO:0005832;chaperonin-containing T-complex;0.0218553000511718!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0225462804996037!GO:0006595;polyamine metabolic process;0.0230980307905809!GO:0004722;protein serine/threonine phosphatase activity;0.0236604009348723!GO:0032507;maintenance of cellular protein localization;0.0236604009348723!GO:0007004;telomere maintenance via telomerase;0.0237525138726287!GO:0043284;biopolymer biosynthetic process;0.0238536844080874!GO:0045603;positive regulation of endothelial cell differentiation;0.0239009109200037!GO:0044262;cellular carbohydrate metabolic process;0.0244172071309126!GO:0009303;rRNA transcription;0.0245308191871389!GO:0005791;rough endoplasmic reticulum;0.0245985569916387!GO:0046483;heterocycle metabolic process;0.0257263305460963!GO:0031124;mRNA 3'-end processing;0.0261149622754785!GO:0008243;plasminogen activator activity;0.0261267058491229!GO:0032984;macromolecular complex disassembly;0.0262741750291833!GO:0006302;double-strand break repair;0.0265736324161449!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0265736324161449!GO:0000428;DNA-directed RNA polymerase complex;0.0265736324161449!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0270396229246001!GO:0031529;ruffle organization and biogenesis;0.0271145017424313!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0271298395191107!GO:0005637;nuclear inner membrane;0.0271298395191107!GO:0042770;DNA damage response, signal transduction;0.0271849879412093!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0278815107772329!GO:0010257;NADH dehydrogenase complex assembly;0.0278815107772329!GO:0033108;mitochondrial respiratory chain complex assembly;0.0278815107772329!GO:0043492;ATPase activity, coupled to movement of substances;0.0279139757725693!GO:0043549;regulation of kinase activity;0.0279554590914662!GO:0040029;regulation of gene expression, epigenetic;0.0284523592440566!GO:0000049;tRNA binding;0.0284523592440566!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0295288038868236!GO:0008097;5S rRNA binding;0.0299886664791949!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0300171821801819!GO:0005912;adherens junction;0.0302051871095355!GO:0000287;magnesium ion binding;0.0305317471090394!GO:0000339;RNA cap binding;0.0308386528985446!GO:0032200;telomere organization and biogenesis;0.0320053470887825!GO:0000723;telomere maintenance;0.0320053470887825!GO:0045936;negative regulation of phosphate metabolic process;0.0323951727820006!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0324608892062872!GO:0016272;prefoldin complex;0.0327322028265094!GO:0006284;base-excision repair;0.0339226643234595!GO:0045334;clathrin-coated endocytic vesicle;0.0349772416245819!GO:0000781;chromosome, telomeric region;0.0349772416245819!GO:0008426;protein kinase C inhibitor activity;0.0359849016599984!GO:0004563;beta-N-acetylhexosaminidase activity;0.0360453482031944!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0363513610244101!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0363513610244101!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0363513610244101!GO:0046519;sphingoid metabolic process;0.036545718192623!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0372145134499408!GO:0000118;histone deacetylase complex;0.0372145134499408!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0374780104367752!GO:0032259;methylation;0.0378061046520769!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0380230192610133!GO:0006405;RNA export from nucleus;0.0380230192610133!GO:0051052;regulation of DNA metabolic process;0.0386155906021434!GO:0008601;protein phosphatase type 2A regulator activity;0.03899906134653!GO:0032508;DNA duplex unwinding;0.0390518432610046!GO:0032392;DNA geometric change;0.0390518432610046!GO:0006118;electron transport;0.0396786935440868!GO:0045737;positive regulation of cyclin-dependent protein kinase activity;0.0406443735128551!GO:0006144;purine base metabolic process;0.0406443735128551!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0407949585082012!GO:0043241;protein complex disassembly;0.0408185357206702!GO:0005862;muscle thin filament tropomyosin;0.0409293043967798!GO:0046966;thyroid hormone receptor binding;0.0410731134528581!GO:0008632;apoptotic program;0.0412660349309315!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0413063838357933!GO:0033043;regulation of organelle organization and biogenesis;0.0413063838357933!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0413681028256014!GO:0008538;proteasome activator activity;0.0418443406911969!GO:0000159;protein phosphatase type 2A complex;0.041891400074808!GO:0004300;enoyl-CoA hydratase activity;0.0423772588487283!GO:0030911;TPR domain binding;0.0429525359036942!GO:0030508;thiol-disulfide exchange intermediate activity;0.0433454524884042!GO:0016791;phosphoric monoester hydrolase activity;0.0434561097123832!GO:0044438;microbody part;0.0438895709245139!GO:0044439;peroxisomal part;0.0438895709245139!GO:0005669;transcription factor TFIID complex;0.0447681428091196!GO:0051270;regulation of cell motility;0.0459301864352629!GO:0003678;DNA helicase activity;0.0466568356397875!GO:0022408;negative regulation of cell-cell adhesion;0.0471643937115816!GO:0051651;maintenance of cellular localization;0.0471745277686995!GO:0005657;replication fork;0.0478094963100883!GO:0030659;cytoplasmic vesicle membrane;0.0479266597278675!GO:0006740;NADPH regeneration;0.0480749634146001!GO:0006098;pentose-phosphate shunt;0.0480749634146001!GO:0000096;sulfur amino acid metabolic process;0.0481162188771485!GO:0005938;cell cortex;0.0485131680169694!GO:0045859;regulation of protein kinase activity;0.0487650866827445!GO:0030140;trans-Golgi network transport vesicle;0.0488478698908304!GO:0008017;microtubule binding;0.0488478698908304!GO:0016301;kinase activity;0.0489880088930309!GO:0015248;sterol transporter activity;0.049644850947778
 |sample_id=11772
 |sample_note=
 |sample_sex=female
-|sample_species=
+|sample_species=Human (Homo sapiens)
 |sample_strain=
 |sample_tissue=parotid gland
 |top_motifs=TP53:3.08387697545;NKX2-1,4:2.37162968955;PAX1,9:1.76282555855;ONECUT1,2:1.72374867907;PDX1:1.55965400402;FOXO1,3,4:1.54416104916;CDC5L:1.53494807501;HOX{A4,D4}:1.47994406808;TBX4,5:1.45113823096;ARID5B:1.21235863317;TBP:1.16404956712;PPARG:1.15732601338;FOXM1:1.11851419038;ZBTB16:1.08573163269;TEF:1.05606201004;BPTF:1.0445536209;AR:1.00789421572;EVI1:0.983680334092;UFEwm:0.962600090285;ZBTB6:0.944143077092;VSX1,2:0.937554800007;POU6F1:0.898777672092;TFAP2{A,C}:0.833602067581;ZNF423:0.80265073663;bHLH_family:0.785446996086;TEAD1:0.778936961632;NR3C1:0.718575090808;RBPJ:0.695928136226;HIF1A:0.694158449285;SNAI1..3:0.685793546734;FOXN1:0.676258737933;GTF2A1,2:0.671544344927;SMAD1..7,9:0.658428474543;CDX1,2,4:0.64823837115;TLX2:0.600626029102;NKX2-3_NKX2-5:0.575282036468;SP1:0.560805996429;SOX17:0.530985228569;IKZF1:0.503412101312;TOPORS:0.494748317419;ZNF384:0.487227079283;KLF4:0.486458948759;PAX5:0.481545961381;MAZ:0.472439568908;ZIC1..3:0.456051520011;ZEB1:0.450846713893;STAT1,3:0.444174480563;RXR{A,B,G}:0.413188009184;ALX4:0.385450359592;MED-1{core}:0.374681066528;FOX{I1,J2}:0.373234474082;HMX1:0.36227092211;NR1H4:0.352758583343;GATA4:0.331712313767;EGR1..3:0.327887740939;AIRE:0.321556803581;MYBL2:0.303071055527;TFDP1:0.299381407242;GFI1:0.288304943671;MYOD1:0.286823543257;FOS_FOS{B,L1}_JUN{B,D}:0.283562649037;REST:0.271825011512;GZF1:0.264705157005;FOX{F1,F2,J1}:0.264151480462;STAT5{A,B}:0.237540180094;YY1:0.237105680601;NR6A1:0.23664007052;FOX{D1,D2}:0.22809372777;ESRRA:0.204358293028;ZNF143:0.203037052336;MYFfamily:0.197281113476;IKZF2:0.195776115634;POU1F1:0.183407471411;MTF1:0.177910954381;RFX2..5_RFXANK_RFXAP:0.166323614734;CEBPA,B_DDIT3:0.144711098106;TLX1..3_NFIC{dimer}:0.142662949907;GFI1B:0.133671061939;NKX6-1,2:0.120832320088;GTF2I:0.119803318739;PAX4:0.11074459518;XCPE1{core}:0.0990443084699;MTE{core}:0.0687199959175;ELK1,4_GABP{A,B1}:0.0676905790962;TFCP2:0.0330445611956;BACH2:0.0159509460411;TFAP4:0.0116060938508;GLI1..3:0.00458317335582;T:-0.00468265852409;LMO2:-0.0152235356198;NKX2-2,8:-0.0205040879286;RORA:-0.0447197873965;ZNF238:-0.0499632788644;ADNP_IRX_SIX_ZHX:-0.0517776927373;EP300:-0.0543061682976;HIC1:-0.0648612652672;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.080389769371;MAFB:-0.0949887053525;SOX5:-0.0972296760261;NRF1:-0.10982482924;GCM1,2:-0.110558605083;HMGA1,2:-0.117183776971;HNF4A_NR2F1,2:-0.119429968127;FOXQ1:-0.121892301069;DBP:-0.126905107657;FOSL2:-0.140413278826;FOXP3:-0.142442372442;NFIL3:-0.152984768043;ESR1:-0.156034665968;HSF1,2:-0.157522349539;NHLH1,2:-0.157748073856;PAX6:-0.15912895922;BREu{core}:-0.160873814853;ALX1:-0.177546032593;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.18072048448;TFAP2B:-0.181645844643;EBF1:-0.20534354434;SOX2:-0.215616250066;IRF7:-0.215831832121;NFE2L1:-0.216745761329;RREB1:-0.219288695723;PRDM1:-0.232095419985;RFX1:-0.253229310749;ZFP161:-0.261036789624;HNF1A:-0.261435785753;LEF1_TCF7_TCF7L1,2:-0.263163993739;HLF:-0.265081992399;E2F1..5:-0.277170580835;MZF1:-0.278424263543;PITX1..3:-0.28292198008;ZNF148:-0.28706723519;NFE2:-0.307603212479;NFIX:-0.320518494255;NFKB1_REL_RELA:-0.3350909469;NKX3-1:-0.340418753877;TAL1_TCF{3,4,12}:-0.353747371367;NFATC1..3:-0.358280233139;SPZ1:-0.371175638277;POU2F1..3:-0.371307701729;PATZ1:-0.384786735761;TGIF1:-0.415755799254;SREBF1,2:-0.424407388945;FOXP1:-0.430042764753;ATF4:-0.47078722355;ELF1,2,4:-0.47166659527;ATF5_CREB3:-0.472387743859;PAX2:-0.475121473815;HES1:-0.481009932715;NR5A1,2:-0.483038909078;CUX2:-0.500075933213;NFY{A,B,C}:-0.507888439258;HOX{A6,A7,B6,B7}:-0.508496370761;ATF2:-0.511934196448;NANOG{mouse}:-0.522808236995;OCT4_SOX2{dimer}:-0.523276434318;CREB1:-0.524402097924;EN1,2:-0.530459023953;AHR_ARNT_ARNT2:-0.531401824517;RXRA_VDR{dimer}:-0.532796087507;HBP1_HMGB_SSRP1_UBTF:-0.568607471729;SRF:-0.587029281006;CRX:-0.594578452001;MEF2{A,B,C,D}:-0.620392526432;FOXL1:-0.623334916704;HOX{A5,B5}:-0.628115662506;POU5F1:-0.640489877001;SPI1:-0.654998469837;SPIB:-0.656741106113;FOXD3:-0.667662768299;GATA6:-0.671860382698;JUN:-0.676239599542;NKX3-2:-0.70497282781;FOXA2:-0.721051302354;LHX3,4:-0.729892588019;ETS1,2:-0.798175264353;RUNX1..3:-0.799599834922;NFE2L2:-0.803538098801;IRF1,2:-0.814890007084;HAND1,2:-0.823243184628;POU3F1..4:-0.830405772505;ATF6:-0.830855401743;STAT2,4,6:-0.843898910613;MYB:-0.861694068346;NANOG:-0.87775507837;DMAP1_NCOR{1,2}_SMARC:-0.913319708298;SOX{8,9,10}:-0.96230726952;PRRX1,2:-1.01199515966;PAX8:-1.12883126509;PAX3,7:-1.19847373088;PBX1:-1.28370934799;XBP1:-1.49899465504;HOXA9_MEIS1:-1.66044251938
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11772-123I8;search_select_hide=table117:FF:11772-123I8
 }}

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FF:11772-123I8: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:19, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0