FF:11348-117G7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004905 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004905 | ||
|accession_numbers=CAGE;DRX008297;DRR009169;DRZ000594;DRZ001979;DRZ011944;DRZ013329 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037099;DRR041465;DRZ007107 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001003,UBERON:0002097,UBERON:0002199,UBERON:0002073,UBERON:0000483,UBERON:0002384,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0004923,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003102,UBERON:0007376,UBERON:0010371,UBERON:0010317,UBERON:0000412,UBERON:0002067,UBERON:0001992,UBERON:0002416 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034,CL:0002559,CL:0000346,CL:1000428 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000072,FF:0000001,FF:0000071 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr7:19157248..19157268,-!p1@TWIST1!2.00!260.51!TWIST1;;chr1:170632285..170632309,+!p1@PRRX1!1.95!98.42!PRRX1;;chr20:55204351..55204377,+!p1@TFAP2C!1.81!79.12!TFAP2C;;chr9:132427883..132427951,+!p2@PRRX2!1.73!52.75!PRRX2;;chr3:147127142..147127168,+!p1@ZIC1!1.68!46.96!ZIC1;;chr3:147127177..147127194,+!p2@ZIC1!1.67!45.67!ZIC1;;chr1:170633348..170633399,+!p2@PRRX1!1.57!48.89!PRRX1;;chr2:114036488..114036504,-!p1@PAX8!1.57!36.02!PAX8;;chr9:132427972..132428056,+!p1@PRRX2!1.53!42.45!PRRX2;;chr11:46299199..46299233,+!p1@CREB3L1!1.50!153.73!CREB3L1;;chr2:119605214..119605230,-!p1@EN1!1.37!22.51!EN1;;chr3:147111231..147111281,+!p3@ZIC1!1.36!21.87!ZIC1;;chr1:170633262..170633285,+!p3@PRRX1!1.35!24.44!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!1.35!21.23!PRRX1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.35!21.23!ZBED1;;chr2:19558373..19558392,-!p1@OSR1!1.33!55.32!OSR1;;chr7:44143925..44143970,+!p1@AEBP1!1.29!396.88!AEBP1;;chr5:72744594..72744609,-!p1@FOXD1!1.28!80.41!FOXD1;;chr6:45296048..45296082,+!p1@RUNX2!1.28!20.58!RUNX2;;chr15:57511609..57511651,+!p2@TCF12!1.26!28.95!TCF12;;chr12:54778471..54778528,-!p1@ZNF385A!1.26!17.37!ZNF385A;;chr1:170632439..170632465,+!p11@PRRX1!1.25!16.72!PRRX1;;chr19:13134772..13134822,+!p2@NFIX!1.22!23.16!NFIX;;chr5:321810..321877,+!p1@AHRR!1.21!47.60!AHRR;;chr4:81118647..81118666,+!p1@PRDM8!1.21!19.94!PRDM8;;chr5:174151553..174151610,+!p1@MSX2!1.17!23.16!MSX2;;chr6:10415276..10415341,-!p2@TFAP2A!1.15!16.08!TFAP2A;;chr14:24837368..24837401,+!p1@NFATC4!1.14!30.23!NFATC4;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.13!13.51!GLIS1;;chr1:170632250..170632277,+!p7@PRRX1!1.12!12.22!PRRX1;;chr3:25470156..25470227,+!p2@RARB!1.12!12.22!RARB;;chr8:116673894..116673913,-!p12@TRPS1!1.12!12.22!TRPS1;;chr6:10412600..10412637,-!p1@TFAP2A!1.08!18.65!TFAP2A;;chr8:93074803..93074845,-!p1@RUNX1T1!1.08!10.94!RUNX1T1;;chrX:136648279..136648295,+!p1@ZIC3!1.08!10.94!ZIC3;;chr2:239756671..239756732,+!p1@TWIST2!1.07!34.74!TWIST2;;chr15:83953397..83953425,-!p1@BNC1!1.07!12.22!BNC1;;chr12:48298765..48298783,-!p2@VDR!1.06!21.87!VDR;;chr11:46299539..46299620,+!p2@CREB3L1!1.06!18.01!CREB3L1;;chr2:176994408..176994492,+!p1@HOXD8!1.05!10.29!HOXD8;;chr5:2751762..2751784,-!p1@IRX2!1.05!10.29!IRX2;;chr7:42276787..42276815,-!p1@GLI3!1.04!27.02!GLI3;;chr7:44143997..44144008,+!p3@AEBP1!1.04!12.86!AEBP1;;chr7:44143978..44143989,+!p2@AEBP1!1.03!18.01!AEBP1;;chr5:72744562..72744573,-!p3@FOXD1!1.03!12.22!FOXD1;;chr5:134369879..134369898,-!p2@PITX1!1.03!9.65!PITX1;;chr1:170633058..170633084,+!p5@PRRX1!1.03!9.65!PRRX1;;chr17:36105042..36105060,-!p1@HNF1B!1.03!9.65!HNF1B;;chr3:147111198..147111225,+!p4@ZIC1!1.03!9.65!ZIC1;;chr10:77161133..77161176,-!p3@ZNF503!1.02!20.58!ZNF503;;chr5:72744445..72744466,-!p2@FOXD1!1.02!16.08!FOXD1;;chr20:39317868..39317884,-!p1@MAFB!1.01!110.64!MAFB;;chr5:134369905..134369972,-!p1@PITX1!1.01!14.15!PITX1;;chr3:157823517..157823562,-!p1@SHOX2!1.00!9.65!SHOX2;;chr1:170632723..170632739,+!p8@PRRX1!1.00!9.01!PRRX1;;chr21:47063625..47063658,+!p1@PCBP3!0.97!37.31!PCBP3;;chr19:45260775..45260838,+!p5@BCL3!0.97!10.94!BCL3;;chr3:147139053..147139112,+!p5@ZIC1!0.97!8.36!ZIC1;;chr11:44331576..44331650,-!p1@ALX4!0.97!8.36!ALX4;;chr11:46333934..46333963,+!p5@CREB3L1!0.97!8.36!CREB3L1;;chr1:170632959..170632987,+!p4@PRRX1!0.96!9.01!PRRX1;;chr19:31840130..31840160,-!p2@TSHZ3!0.94!12.22!TSHZ3;;chr3:147124307..147124336,-!p2@ZIC4!0.94!7.72!ZIC4;;chr5:174151612..174151633,+!p2@MSX2!0.94!7.72!MSX2;;chr1:119530706..119530736,-!p3@TBX15!0.94!7.72!TBX15;;chr8:72756667..72756736,-!p2@MSC!0.92!11.58!MSC;;chr12:53614115..53614154,-!p1@RARG!0.91!39.88!RARG;;chr10:77161650..77161661,-!p4@ZNF503!0.91!10.29!ZNF503;;chr10:28032421..28032494,-!p2@MKX!0.91!7.08!MKX;;chr16:31076332..31076388,-!p3@ZNF668!0.91!7.08!ZNF668;;chr1:170632137..170632172,+!p10@PRRX1!0.91!7.08!PRRX1;;chr1:170632310..170632321,+!p15@PRRX1!0.91!7.08!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.91!7.08!PRRX1;;chr3:25469724..25469773,+!p1@RARB!0.90!10.29!RARB;;chr11:12696071..12696086,+!p3@TEAD1!0.89!9.01!TEAD1;;chr17:46622440..46622477,-!p5@HOXB2!0.89!7.72!HOXB2;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.88!68.83!GLIS2;;chr8:72756063..72756125,-!p1@MSC!0.87!13.51!MSC;;chr12:48298785..48298828,-!p1@VDR!0.86!35.38!VDR;;chr6:10412392..10412409,-!p4@TFAP2A!0.85!7.08!TFAP2A;;chr6:19837592..19837621,+!p1@ID4!0.84!38.59!ID4;;chr14:61116183..61116208,-!p1@SIX1!0.84!23.80!SIX1;;chr5:158526917..158526932,-!p1@EBF1!0.84!15.44!EBF1;;chr17:46622229..46622257,-!p6@HOXB2!0.84!7.08!HOXB2;;chr3:141121847..141121868,+!p5@ZBTB38!0.83!9.01!ZBTB38;;chr2:119604456..119604501,-!p2@EN1!0.83!5.79!EN1;;chr2:177053386..177053402,+!p1@HOXD1!0.83!5.79!HOXD1;;chr3:147111317..147111328,+!p8@ZIC1!0.83!5.79!ZIC1;;chr1:170632115..170632136,+!p9@PRRX1!0.83!5.79!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.83!5.79!PRRX1;;chr12:53625846..53625861,-!p6@RARG!0.83!5.79!RARG;;chrX:136648643..136648711,+!p2@ZIC3!0.83!5.79!ZIC3;;chr7:44143738..44143760,+!p4@AEBP1!0.82!6.43!AEBP1;;chr15:42749722..42749739,-!p2@ZFP106!0.81!10.29!ZFP106;;chr10:77161504..77161530,-!p1@ZNF503!0.80!76.55!ZNF503;;chr7:19157043..19157088,-!p2@TWIST1!0.80!14.15!TWIST1;;chr8:49833948..49833973,-!p2@SNAI2!0.79!35.38!SNAI2;;chr3:24536253..24536328,-!p1@THRB!0.79!10.29!THRB;;chr19:13134457..13134462,+!p5@NFIX!0.79!9.65!NFIX;;chr16:86612320..86612394,+!p1@FOXL1!0.79!5.15!FOXL1;;chr10:28034739..28034756,-!p1@MKX!0.79!5.15!MKX;;chr11:46299443..46299459,+!p4@CREB3L1!0.79!5.15!CREB3L1;;chr2:96012397..96012417,+!p3@KCNIP3!0.79!5.15!KCNIP3;;chr3:138665937..138665968,-!p1@FOXL2!0.79!5.15!FOXL2;;chr1:170632683..170632696,+!p12@PRRX1!0.79!5.15!PRRX1;;chr20:55205825..55205847,+!p2@TFAP2C!0.79!5.15!TFAP2C;;chr10:31607702..31607755,+!p3@ZEB1!0.77!5.79!ZEB1;;chr8:49833978..49833996,-!p1@SNAI2!0.76!109.35!SNAI2;;chr20:48599506..48599526,+!p1@SNAI1!0.76!33.45!SNAI1;;chr19:45254508..45254528,+!p12@BCL3!0.75!5.15!BCL3;;chr11:46332679..46332695,+!p12@CREB3L1!0.74!4.50!CREB3L1;;chr6:100912785..100912822,-!p1@SIM1!0.74!4.50!SIM1;;chr3:147127329..147127341,+!p7@ZIC1!0.74!4.50!ZIC1;;chr17:3571887..3571918,-!p2@TAX1BP3!0.73!54.68!TAX1BP3;;chr4:4861385..4861398,+!p1@MSX1!0.73!14.15!MSX1;;chr2:28616358..28616380,+!p3@FOSL2!0.72!24.44!FOSL2;;chr20:62680984..62680999,-!p1@SOX18!0.72!5.79!SOX18;;chr14:62162285..62162296,+!p3@HIF1A!0.71!23.80!HIF1A;;chr17:46621937..46621966,-!p2@HOXB2!0.71!12.22!HOXB2;;chr7:150946015..150946070,-!p3@SMARCD3!0.71!9.65!SMARCD3;;chr6:1312325..1312340,+!p1@FOXQ1!0.71!7.08!FOXQ1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.70!327.41!TAX1BP3;;chr12:3069037..3069119,+!p2@TEAD4!0.70!15.44!TEAD4;;chr18:51750414..51750449,-!p5@MBD2!0.70!8.36!MBD2;;chr7:137564372..137564394,-!p7@CREB3L2!0.70!7.08!CREB3L2;;chr10:77161533..77161546,-!p2@ZNF503!0.69!17.37!ZNF503;;chr8:99956662..99956684,+!p1@OSR2!0.69!6.43!OSR2;;chr5:3595934..3595957,+!p2@IRX1!0.69!3.86!IRX1;;chr5:3595977..3595999,+!p1@IRX1!0.69!3.86!IRX1;;chr7:35293685..35293718,-!p1@TBX20!0.69!3.86!TBX20;;chr11:128331703..128331717,-!p8@ETS1!0.69!3.86!ETS1;;chr11:44331679..44331702,-!p2@ALX4!0.69!3.86!ALX4;;chr2:96012353..96012378,+!p4@KCNIP3!0.69!3.86!KCNIP3;;chr3:147121835..147121852,-!p9@ZIC4!0.69!3.86!ZIC4;;chr3:21792682..21792720,-!p1@ZNF385D!0.69!3.86!ZNF385D;;chr4:109089095..109089144,-!p6@LEF1!0.69!3.86!LEF1;;chr16:49698228..49698243,-!p2@ZNF423!0.69!3.86!ZNF423;;chr1:119530493..119530572,-!p1@TBX15!0.69!3.86!TBX15;;chr1:170633245..170633256,+!p14@PRRX1!0.69!3.86!PRRX1;;chr2:60780607..60780624,-!p2@BCL11A!0.68!12.86!BCL11A;;chr14:62203595..62203676,+!p4@HIF1A!0.68!7.72!HIF1A;;chr2:28616337..28616355,+!p2@FOSL2!0.67!76.55!FOSL2;;chr11:65687362..65687436,+!p3@DRAP1!0.67!19.30!DRAP1;;chr12:53625966..53626012,-!p2@RARG!0.67!10.94!RARG;;chr19:13136241..13136258,+!p7@NFIX!0.67!5.15!NFIX;;chr5:72743793..72743855,-!p4@FOXD1!0.67!4.50!FOXD1;;chr8:116681409..116681431,-!p2@TRPS1!0.66!10.94!TRPS1;;chr4:81104985..81105005,+!p4@PRDM8!0.66!4.50!PRDM8;;chr7:137563905..137563916,-!p11@CREB3L2!0.65!5.15!CREB3L2;;chr8:48650715..48650735,-!p1@CEBPD!0.64!504.30!CEBPD;;chr2:191878874..191878938,-!p1@STAT1!0.64!213.56!STAT1;;chr12:53856284..53856299,+!p3@PCBP2!0.64!10.94!PCBP2;;chr17:46622070..46622109,-!p1@HOXB2!0.64!8.36!HOXB2;;chr11:65687222..65687240,+!p7@DRAP1!0.64!4.50!DRAP1;;chr8:72756213..72756243,-!p5@MSC!0.64!4.50!MSC;;chr2:28615716..28615733,+!p1@FOSL2!0.63!186.54!FOSL2;;chr22:41697497..41697515,+!p2@ZC3H7B!0.63!10.29!ZC3H7B;;chr11:615570..615721,-!p2@IRF7!0.63!7.08!IRF7;;chr11:63684602..63684664,-!p1@RCOR2!0.63!7.08!RCOR2;;chr8:72756267..72756296,-!p4@MSC!0.63!5.15!MSC;;chr1:23885981..23886002,-!p1@ID3!0.62!661.25!ID3;;chr14:62162258..62162269,+!p2@HIF1A!0.62!36.02!HIF1A;;chr2:46602901..46602926,+!p7@EPAS1!0.62!4.50!EPAS1;;chr2:176987441..176987454,+!p1@HOXD9!0.62!3.22!HOXD9;;chr2:19558327..19558334,-!p2@OSR1!0.62!3.22!OSR1;;chr2:223163706..223163730,-!p1@PAX3!0.62!3.22!PAX3;;chr3:181429704..181429722,+!p1@SOX2!0.62!3.22!SOX2;;chr3:181429741..181429767,+!p2@SOX2!0.62!3.22!SOX2;;chr10:119303078..119303169,+!p2@EMX2!0.62!3.22!EMX2;;chrX:136648297..136648319,+!p3@ZIC3!0.62!3.22!ZIC3;;chr15:57511589..57511608,+!p4@TCF12!0.62!3.22!TCF12;;chr1:170632051..170632081,+!p16@PRRX1!0.62!3.22!PRRX1;;chr1:170633021..170633028,+!p27@PRRX1!0.62!3.22!PRRX1;;chr6:100912752..100912778,-!p2@SIM1!0.62!3.22!SIM1;;chr6:10412576..10412599,-!p5@TFAP2A!0.62!3.22!TFAP2A;;chr8:72756380..72756427,-!p8@MSC!0.62!3.22!MSC;;chr17:1958388..1958404,+!p1@HIC1!0.61!23.16!HIC1;;chr7:137563945..137564001,-!p6@CREB3L2!0.61!8.36!CREB3L2;;chr2:239756739..239756755,+!p2@TWIST2!0.61!5.79!TWIST2;;chr11:64764435..64764449,-!p1@BATF2!0.61!4.50!BATF2;;chr11:65687158..65687216,+!p4@DRAP1!0.60!20.58!DRAP1;;chr8:145159846..145159889,+!p6@MAF1!0.60!4.50!MAF1;;chr6:43140095..43140145,+!p5@SRF!0.60!3.86!SRF;;chr6:43140149..43140177,+!p8@SRF!0.60!3.22!SRF;;chr12:56753869..56753930,-!p1@STAT2!0.59!155.66!STAT2;;chr10:63853436..63853442,+!p4@ARID5B!0.59!18.65!ARID5B;;chr12:57919293..57919311,+!p3@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chr1:217251561..217251581,-!p8@ESRRG!0.22!0.64!ESRRG;;chr1:25256439..25256476,-!p3@RUNX3!0.22!0.64!RUNX3;;chr1:25291475..25291511,-!p2@RUNX3!0.22!0.64!RUNX3;;chr1:25291648..25291665,-!p7@RUNX3!0.22!0.64!RUNX3;;chr1:25291678..25291685,-!p8@RUNX3!0.22!0.64!RUNX3;;chr1:40367668..40367684,-!p2@MYCL1!0.22!0.64!MYCL1;;chr1:59250262..59250296,-!p5@JUN!0.22!0.64!JUN;;chr1:8586069..8586080,-!p35@RERE!0.22!0.64!RERE;;chr20:30433396..30433414,-!p1@FOXS1!0.22!0.64!FOXS1;;chr20:30433431..30433442,-!p2@FOXS1!0.22!0.64!FOXS1;;chr20:42602000..42602034,+!p5@TOX2!0.22!0.64!TOX2;;chr20:48808064..48808086,+!p15@CEBPB!0.22!0.64!CEBPB;;chr20:48808672..48808680,+!p26@CEBPB!0.22!0.64!CEBPB;;chr20:49547574..49547577,-!p11@ADNP!0.22!0.64!ADNP;;chr20:50808639..50808661,-!p6@ZFP64!0.22!0.64!ZFP64;;chr20:55205791..55205817,+!p3@TFAP2C!0.22!0.64!TFAP2C;;chr21:36259830..36259842,-!p30@RUNX1!0.22!0.64!RUNX1;;chr21:36260495..36260506,-!p23@RUNX1!0.22!0.64!RUNX1;;chr15:31618889..31618902,+!p15@KLF13!0.22!0.64!KLF13;;chr15:31631789..31631811,+!p13@KLF13!0.22!0.64!KLF13;;chr15:37391614..37391626,-!p18@MEIS2!0.22!0.64!MEIS2;;chr15:42743848..42743854,-!p15@ZFP106!0.22!0.64!ZFP106;;chr15:57211275..57211290,+!p14@TCF12!0.22!0.64!TCF12;;chr15:66994718..66994729,+!p4@SMAD6!0.22!0.64!SMAD6;;chr15:67391010..67391046,+!p13@SMAD3!0.22!0.64!SMAD3;;chr15:80842979..80842998,+!p20@ARNT2!0.22!0.64!ARNT2;;chr15:96869206..96869220,+!p21@NR2F2!0.22!0.64!NR2F2;;chr16:30406423..30406447,+!p4@ZNF48!0.22!0.64!ZNF48;;chr16:31076165..31076175,-!p16@ZNF668!0.22!0.64!ZNF668;;chr16:51185172..51185197,-!p1@SALL1!0.22!0.64!SALL1;;chr16:51185318..51185348,-!p2@SALL1!0.22!0.64!SALL1;;chr16:51185439..51185450,-!p8@SALL1!0.22!0.64!SALL1;;chr16:51185511..51185522,-!p9@SALL1!0.22!0.64!SALL1;;chr16:51185573..51185593,-!p3@SALL1!0.22!0.64!SALL1;;chr16:69681215..69681227,+!p17@NFAT5!0.22!0.64!NFAT5;;chr16:69726317..69726339,+!p14@NFAT5!0.22!0.64!NFAT5;;chr16:79633883..79633892,-!p6@MAF!0.22!0.64!MAF;;chr16:88497018..88497035,+!p@chr16:88497018..88497035,+!0.22!0.64!ZNF469;;chr16:89970522..89970530,+!p9@TCF25!0.22!0.64!TCF25;;chr17:36105074..36105086,-!p2@HNF1B!0.22!0.64!HNF1B;;chr17:40428334..40428345,-!p2@STAT5B!0.22!0.64!STAT5B;;chr17:40440359..40440386,+!p4@STAT5A!0.22!0.64!STAT5A;;chr17:41622731..41622764,-!p5@ETV4!0.22!0.64!ETV4;;chr17:42295682..42295731,-!p17@UBTF!0.22!0.64!UBTF;;chr17:46132044..46132080,+!p4@NFE2L1!0.22!0.64!NFE2L1;;chr17:46622143..46622152,-!p14@HOXB2!0.22!0.64!HOXB2;;chr17:46659728..46659749,-!p3@HOXB3!0.22!0.64!HOXB3;;chr17:46671108..46671147,-!p1@HOXB5!0.22!0.64!HOXB5;;chr17:46675344..46675355,-!p9@HOXB6!0.22!0.64!HOXB6;;chr17:46687935..46687950,-!p3@HOXB7!0.22!0.64!HOXB7;;chr17:7387486..7387497,-!p11@ZBTB4!0.22!0.64!ZBTB4;;chr18:42260861..42260882,+!p5@SETBP1!0.22!0.64!SETBP1;;chr18:46477326..46477341,-!p2@SMAD7!0.22!0.64!SMAD7;;chr18:52894476..52894484,-!p41@TCF4!0.22!0.64!TCF4;;chr18:52969844..52969895,-!p27@TCF4!0.22!0.64!TCF4;;chr18:52988952..52988965,-!p23@TCF4!0.22!0.64!TCF4;;chr18:53089493..53089517,-!p15@TCF4!0.22!0.64!TCF4;;chr18:53253323..53253359,-!p19@TCF4!0.22!0.64!TCF4;;chr18:53254728..53254740,-!p79@TCF4!0.22!0.64!TCF4;;chr19:12267492..12267505,-!p2@ZNF625,p3@ZNF20!0.22!0.64!ZNF625;;chr19:13135369..13135375,+!p21@NFIX!0.22!0.64!NFIX;;chr19:13136166..13136177,+!p40@NFIX!0.22!0.64!NFIX;;chr19:16435423..16435484,+!p5@KLF2!0.22!0.64!KLF2;;chr19:16435705..16435726,+!p3@KLF2!0.22!0.64!KLF2;;chr19:18391642..18391645,-!p10@JUND!0.22!0.64!JUND;; | |expression_enrichment_score=chr7:19157248..19157268,-!p1@TWIST1!2.00!260.51!TWIST1;;chr1:170632285..170632309,+!p1@PRRX1!1.95!98.42!PRRX1;;chr20:55204351..55204377,+!p1@TFAP2C!1.81!79.12!TFAP2C;;chr9:132427883..132427951,+!p2@PRRX2!1.73!52.75!PRRX2;;chr3:147127142..147127168,+!p1@ZIC1!1.68!46.96!ZIC1;;chr3:147127177..147127194,+!p2@ZIC1!1.67!45.67!ZIC1;;chr1:170633348..170633399,+!p2@PRRX1!1.57!48.89!PRRX1;;chr2:114036488..114036504,-!p1@PAX8!1.57!36.02!PAX8;;chr9:132427972..132428056,+!p1@PRRX2!1.53!42.45!PRRX2;;chr11:46299199..46299233,+!p1@CREB3L1!1.50!153.73!CREB3L1;;chr2:119605214..119605230,-!p1@EN1!1.37!22.51!EN1;;chr3:147111231..147111281,+!p3@ZIC1!1.36!21.87!ZIC1;;chr1:170633262..170633285,+!p3@PRRX1!1.35!24.44!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!1.35!21.23!PRRX1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.35!21.23!ZBED1;;chr2:19558373..19558392,-!p1@OSR1!1.33!55.32!OSR1;;chr7:44143925..44143970,+!p1@AEBP1!1.29!396.88!AEBP1;;chr5:72744594..72744609,-!p1@FOXD1!1.28!80.41!FOXD1;;chr6:45296048..45296082,+!p1@RUNX2!1.28!20.58!RUNX2;;chr15:57511609..57511651,+!p2@TCF12!1.26!28.95!TCF12;;chr12:54778471..54778528,-!p1@ZNF385A!1.26!17.37!ZNF385A;;chr1:170632439..170632465,+!p11@PRRX1!1.25!16.72!PRRX1;;chr19:13134772..13134822,+!p2@NFIX!1.22!23.16!NFIX;;chr5:321810..321877,+!p1@AHRR!1.21!47.60!AHRR;;chr4:81118647..81118666,+!p1@PRDM8!1.21!19.94!PRDM8;;chr5:174151553..174151610,+!p1@MSX2!1.17!23.16!MSX2;;chr6:10415276..10415341,-!p2@TFAP2A!1.15!16.08!TFAP2A;;chr14:24837368..24837401,+!p1@NFATC4!1.14!30.23!NFATC4;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.13!13.51!GLIS1;;chr1:170632250..170632277,+!p7@PRRX1!1.12!12.22!PRRX1;;chr3:25470156..25470227,+!p2@RARB!1.12!12.22!RARB;;chr8:116673894..116673913,-!p12@TRPS1!1.12!12.22!TRPS1;;chr6:10412600..10412637,-!p1@TFAP2A!1.08!18.65!TFAP2A;;chr8:93074803..93074845,-!p1@RUNX1T1!1.08!10.94!RUNX1T1;;chrX:136648279..136648295,+!p1@ZIC3!1.08!10.94!ZIC3;;chr2:239756671..239756732,+!p1@TWIST2!1.07!34.74!TWIST2;;chr15:83953397..83953425,-!p1@BNC1!1.07!12.22!BNC1;;chr12:48298765..48298783,-!p2@VDR!1.06!21.87!VDR;;chr11:46299539..46299620,+!p2@CREB3L1!1.06!18.01!CREB3L1;;chr2:176994408..176994492,+!p1@HOXD8!1.05!10.29!HOXD8;;chr5:2751762..2751784,-!p1@IRX2!1.05!10.29!IRX2;;chr7:42276787..42276815,-!p1@GLI3!1.04!27.02!GLI3;;chr7:44143997..44144008,+!p3@AEBP1!1.04!12.86!AEBP1;;chr7:44143978..44143989,+!p2@AEBP1!1.03!18.01!AEBP1;;chr5:72744562..72744573,-!p3@FOXD1!1.03!12.22!FOXD1;;chr5:134369879..134369898,-!p2@PITX1!1.03!9.65!PITX1;;chr1:170633058..170633084,+!p5@PRRX1!1.03!9.65!PRRX1;;chr17:36105042..36105060,-!p1@HNF1B!1.03!9.65!HNF1B;;chr3:147111198..147111225,+!p4@ZIC1!1.03!9.65!ZIC1;;chr10:77161133..77161176,-!p3@ZNF503!1.02!20.58!ZNF503;;chr5:72744445..72744466,-!p2@FOXD1!1.02!16.08!FOXD1;;chr20:39317868..39317884,-!p1@MAFB!1.01!110.64!MAFB;;chr5:134369905..134369972,-!p1@PITX1!1.01!14.15!PITX1;;chr3:157823517..157823562,-!p1@SHOX2!1.00!9.65!SHOX2;;chr1:170632723..170632739,+!p8@PRRX1!1.00!9.01!PRRX1;;chr21:47063625..47063658,+!p1@PCBP3!0.97!37.31!PCBP3;;chr19:45260775..45260838,+!p5@BCL3!0.97!10.94!BCL3;;chr3:147139053..147139112,+!p5@ZIC1!0.97!8.36!ZIC1;;chr11:44331576..44331650,-!p1@ALX4!0.97!8.36!ALX4;;chr11:46333934..46333963,+!p5@CREB3L1!0.97!8.36!CREB3L1;;chr1:170632959..170632987,+!p4@PRRX1!0.96!9.01!PRRX1;;chr19:31840130..31840160,-!p2@TSHZ3!0.94!12.22!TSHZ3;;chr3:147124307..147124336,-!p2@ZIC4!0.94!7.72!ZIC4;;chr5:174151612..174151633,+!p2@MSX2!0.94!7.72!MSX2;;chr1:119530706..119530736,-!p3@TBX15!0.94!7.72!TBX15;;chr8:72756667..72756736,-!p2@MSC!0.92!11.58!MSC;;chr12:53614115..53614154,-!p1@RARG!0.91!39.88!RARG;;chr10:77161650..77161661,-!p4@ZNF503!0.91!10.29!ZNF503;;chr10:28032421..28032494,-!p2@MKX!0.91!7.08!MKX;;chr16:31076332..31076388,-!p3@ZNF668!0.91!7.08!ZNF668;;chr1:170632137..170632172,+!p10@PRRX1!0.91!7.08!PRRX1;;chr1:170632310..170632321,+!p15@PRRX1!0.91!7.08!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.91!7.08!PRRX1;;chr3:25469724..25469773,+!p1@RARB!0.90!10.29!RARB;;chr11:12696071..12696086,+!p3@TEAD1!0.89!9.01!TEAD1;;chr17:46622440..46622477,-!p5@HOXB2!0.89!7.72!HOXB2;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.88!68.83!GLIS2;;chr8:72756063..72756125,-!p1@MSC!0.87!13.51!MSC;;chr12:48298785..48298828,-!p1@VDR!0.86!35.38!VDR;;chr6:10412392..10412409,-!p4@TFAP2A!0.85!7.08!TFAP2A;;chr6:19837592..19837621,+!p1@ID4!0.84!38.59!ID4;;chr14:61116183..61116208,-!p1@SIX1!0.84!23.80!SIX1;;chr5:158526917..158526932,-!p1@EBF1!0.84!15.44!EBF1;;chr17:46622229..46622257,-!p6@HOXB2!0.84!7.08!HOXB2;;chr3:141121847..141121868,+!p5@ZBTB38!0.83!9.01!ZBTB38;;chr2:119604456..119604501,-!p2@EN1!0.83!5.79!EN1;;chr2:177053386..177053402,+!p1@HOXD1!0.83!5.79!HOXD1;;chr3:147111317..147111328,+!p8@ZIC1!0.83!5.79!ZIC1;;chr1:170632115..170632136,+!p9@PRRX1!0.83!5.79!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.83!5.79!PRRX1;;chr12:53625846..53625861,-!p6@RARG!0.83!5.79!RARG;;chrX:136648643..136648711,+!p2@ZIC3!0.83!5.79!ZIC3;;chr7:44143738..44143760,+!p4@AEBP1!0.82!6.43!AEBP1;;chr15:42749722..42749739,-!p2@ZFP106!0.81!10.29!ZFP106;;chr10:77161504..77161530,-!p1@ZNF503!0.80!76.55!ZNF503;;chr7:19157043..19157088,-!p2@TWIST1!0.80!14.15!TWIST1;;chr8:49833948..49833973,-!p2@SNAI2!0.79!35.38!SNAI2;;chr3:24536253..24536328,-!p1@THRB!0.79!10.29!THRB;;chr19:13134457..13134462,+!p5@NFIX!0.79!9.65!NFIX;;chr16:86612320..86612394,+!p1@FOXL1!0.79!5.15!FOXL1;;chr10:28034739..28034756,-!p1@MKX!0.79!5.15!MKX;;chr11:46299443..46299459,+!p4@CREB3L1!0.79!5.15!CREB3L1;;chr2:96012397..96012417,+!p3@KCNIP3!0.79!5.15!KCNIP3;;chr3:138665937..138665968,-!p1@FOXL2!0.79!5.15!FOXL2;;chr1:170632683..170632696,+!p12@PRRX1!0.79!5.15!PRRX1;;chr20:55205825..55205847,+!p2@TFAP2C!0.79!5.15!TFAP2C;;chr10:31607702..31607755,+!p3@ZEB1!0.77!5.79!ZEB1;;chr8:49833978..49833996,-!p1@SNAI2!0.76!109.35!SNAI2;;chr20:48599506..48599526,+!p1@SNAI1!0.76!33.45!SNAI1;;chr19:45254508..45254528,+!p12@BCL3!0.75!5.15!BCL3;;chr11:46332679..46332695,+!p12@CREB3L1!0.74!4.50!CREB3L1;;chr6:100912785..100912822,-!p1@SIM1!0.74!4.50!SIM1;;chr3:147127329..147127341,+!p7@ZIC1!0.74!4.50!ZIC1;;chr17:3571887..3571918,-!p2@TAX1BP3!0.73!54.68!TAX1BP3;;chr4:4861385..4861398,+!p1@MSX1!0.73!14.15!MSX1;;chr2:28616358..28616380,+!p3@FOSL2!0.72!24.44!FOSL2;;chr20:62680984..62680999,-!p1@SOX18!0.72!5.79!SOX18;;chr14:62162285..62162296,+!p3@HIF1A!0.71!23.80!HIF1A;;chr17:46621937..46621966,-!p2@HOXB2!0.71!12.22!HOXB2;;chr7:150946015..150946070,-!p3@SMARCD3!0.71!9.65!SMARCD3;;chr6:1312325..1312340,+!p1@FOXQ1!0.71!7.08!FOXQ1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.70!327.41!TAX1BP3;;chr12:3069037..3069119,+!p2@TEAD4!0.70!15.44!TEAD4;;chr18:51750414..51750449,-!p5@MBD2!0.70!8.36!MBD2;;chr7:137564372..137564394,-!p7@CREB3L2!0.70!7.08!CREB3L2;;chr10:77161533..77161546,-!p2@ZNF503!0.69!17.37!ZNF503;;chr8:99956662..99956684,+!p1@OSR2!0.69!6.43!OSR2;;chr5:3595934..3595957,+!p2@IRX1!0.69!3.86!IRX1;;chr5:3595977..3595999,+!p1@IRX1!0.69!3.86!IRX1;;chr7:35293685..35293718,-!p1@TBX20!0.69!3.86!TBX20;;chr11:128331703..128331717,-!p8@ETS1!0.69!3.86!ETS1;;chr11:44331679..44331702,-!p2@ALX4!0.69!3.86!ALX4;;chr2:96012353..96012378,+!p4@KCNIP3!0.69!3.86!KCNIP3;;chr3:147121835..147121852,-!p9@ZIC4!0.69!3.86!ZIC4;;chr3:21792682..21792720,-!p1@ZNF385D!0.69!3.86!ZNF385D;;chr4:109089095..109089144,-!p6@LEF1!0.69!3.86!LEF1;;chr16:49698228..49698243,-!p2@ZNF423!0.69!3.86!ZNF423;;chr1:119530493..119530572,-!p1@TBX15!0.69!3.86!TBX15;;chr1:170633245..170633256,+!p14@PRRX1!0.69!3.86!PRRX1;;chr2:60780607..60780624,-!p2@BCL11A!0.68!12.86!BCL11A;;chr14:62203595..62203676,+!p4@HIF1A!0.68!7.72!HIF1A;;chr2:28616337..28616355,+!p2@FOSL2!0.67!76.55!FOSL2;;chr11:65687362..65687436,+!p3@DRAP1!0.67!19.30!DRAP1;;chr12:53625966..53626012,-!p2@RARG!0.67!10.94!RARG;;chr19:13136241..13136258,+!p7@NFIX!0.67!5.15!NFIX;;chr5:72743793..72743855,-!p4@FOXD1!0.67!4.50!FOXD1;;chr8:116681409..116681431,-!p2@TRPS1!0.66!10.94!TRPS1;;chr4:81104985..81105005,+!p4@PRDM8!0.66!4.50!PRDM8;;chr7:137563905..137563916,-!p11@CREB3L2!0.65!5.15!CREB3L2;;chr8:48650715..48650735,-!p1@CEBPD!0.64!504.30!CEBPD;;chr2:191878874..191878938,-!p1@STAT1!0.64!213.56!STAT1;;chr12:53856284..53856299,+!p3@PCBP2!0.64!10.94!PCBP2;;chr17:46622070..46622109,-!p1@HOXB2!0.64!8.36!HOXB2;;chr11:65687222..65687240,+!p7@DRAP1!0.64!4.50!DRAP1;;chr8:72756213..72756243,-!p5@MSC!0.64!4.50!MSC;;chr2:28615716..28615733,+!p1@FOSL2!0.63!186.54!FOSL2;;chr22:41697497..41697515,+!p2@ZC3H7B!0.63!10.29!ZC3H7B;;chr11:615570..615721,-!p2@IRF7!0.63!7.08!IRF7;;chr11:63684602..63684664,-!p1@RCOR2!0.63!7.08!RCOR2;;chr8:72756267..72756296,-!p4@MSC!0.63!5.15!MSC;;chr1:23885981..23886002,-!p1@ID3!0.62!661.25!ID3;;chr14:62162258..62162269,+!p2@HIF1A!0.62!36.02!HIF1A;;chr2:46602901..46602926,+!p7@EPAS1!0.62!4.50!EPAS1;;chr2:176987441..176987454,+!p1@HOXD9!0.62!3.22!HOXD9;;chr2:19558327..19558334,-!p2@OSR1!0.62!3.22!OSR1;;chr2:223163706..223163730,-!p1@PAX3!0.62!3.22!PAX3;;chr3:181429704..181429722,+!p1@SOX2!0.62!3.22!SOX2;;chr3:181429741..181429767,+!p2@SOX2!0.62!3.22!SOX2;;chr10:119303078..119303169,+!p2@EMX2!0.62!3.22!EMX2;;chrX:136648297..136648319,+!p3@ZIC3!0.62!3.22!ZIC3;;chr15:57511589..57511608,+!p4@TCF12!0.62!3.22!TCF12;;chr1:170632051..170632081,+!p16@PRRX1!0.62!3.22!PRRX1;;chr1:170633021..170633028,+!p27@PRRX1!0.62!3.22!PRRX1;;chr6:100912752..100912778,-!p2@SIM1!0.62!3.22!SIM1;;chr6:10412576..10412599,-!p5@TFAP2A!0.62!3.22!TFAP2A;;chr8:72756380..72756427,-!p8@MSC!0.62!3.22!MSC;;chr17:1958388..1958404,+!p1@HIC1!0.61!23.16!HIC1;;chr7:137563945..137564001,-!p6@CREB3L2!0.61!8.36!CREB3L2;;chr2:239756739..239756755,+!p2@TWIST2!0.61!5.79!TWIST2;;chr11:64764435..64764449,-!p1@BATF2!0.61!4.50!BATF2;;chr11:65687158..65687216,+!p4@DRAP1!0.60!20.58!DRAP1;;chr8:145159846..145159889,+!p6@MAF1!0.60!4.50!MAF1;;chr6:43140095..43140145,+!p5@SRF!0.60!3.86!SRF;;chr6:43140149..43140177,+!p8@SRF!0.60!3.22!SRF;;chr12:56753869..56753930,-!p1@STAT2!0.59!155.66!STAT2;;chr10:63853436..63853442,+!p4@ARID5B!0.59!18.65!ARID5B;;chr12:57919293..57919311,+!p3@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chr1:217251561..217251581,-!p8@ESRRG!0.22!0.64!ESRRG;;chr1:25256439..25256476,-!p3@RUNX3!0.22!0.64!RUNX3;;chr1:25291475..25291511,-!p2@RUNX3!0.22!0.64!RUNX3;;chr1:25291648..25291665,-!p7@RUNX3!0.22!0.64!RUNX3;;chr1:25291678..25291685,-!p8@RUNX3!0.22!0.64!RUNX3;;chr1:40367668..40367684,-!p2@MYCL1!0.22!0.64!MYCL1;;chr1:59250262..59250296,-!p5@JUN!0.22!0.64!JUN;;chr1:8586069..8586080,-!p35@RERE!0.22!0.64!RERE;;chr20:30433396..30433414,-!p1@FOXS1!0.22!0.64!FOXS1;;chr20:30433431..30433442,-!p2@FOXS1!0.22!0.64!FOXS1;;chr20:42602000..42602034,+!p5@TOX2!0.22!0.64!TOX2;;chr20:48808064..48808086,+!p15@CEBPB!0.22!0.64!CEBPB;;chr20:48808672..48808680,+!p26@CEBPB!0.22!0.64!CEBPB;;chr20:49547574..49547577,-!p11@ADNP!0.22!0.64!ADNP;;chr20:50808639..50808661,-!p6@ZFP64!0.22!0.64!ZFP64;;chr20:55205791..55205817,+!p3@TFAP2C!0.22!0.64!TFAP2C;;chr21:36259830..36259842,-!p30@RUNX1!0.22!0.64!RUNX1;;chr21:36260495..36260506,-!p23@RUNX1!0.22!0.64!RUNX1;;chr15:31618889..31618902,+!p15@KLF13!0.22!0.64!KLF13;;chr15:31631789..31631811,+!p13@KLF13!0.22!0.64!KLF13;;chr15:37391614..37391626,-!p18@MEIS2!0.22!0.64!MEIS2;;chr15:42743848..42743854,-!p15@ZFP106!0.22!0.64!ZFP106;;chr15:57211275..57211290,+!p14@TCF12!0.22!0.64!TCF12;;chr15:66994718..66994729,+!p4@SMAD6!0.22!0.64!SMAD6;;chr15:67391010..67391046,+!p13@SMAD3!0.22!0.64!SMAD3;;chr15:80842979..80842998,+!p20@ARNT2!0.22!0.64!ARNT2;;chr15:96869206..96869220,+!p21@NR2F2!0.22!0.64!NR2F2;;chr16:30406423..30406447,+!p4@ZNF48!0.22!0.64!ZNF48;;chr16:31076165..31076175,-!p16@ZNF668!0.22!0.64!ZNF668;;chr16:51185172..51185197,-!p1@SALL1!0.22!0.64!SALL1;;chr16:51185318..51185348,-!p2@SALL1!0.22!0.64!SALL1;;chr16:51185439..51185450,-!p8@SALL1!0.22!0.64!SALL1;;chr16:51185511..51185522,-!p9@SALL1!0.22!0.64!SALL1;;chr16:51185573..51185593,-!p3@SALL1!0.22!0.64!SALL1;;chr16:69681215..69681227,+!p17@NFAT5!0.22!0.64!NFAT5;;chr16:69726317..69726339,+!p14@NFAT5!0.22!0.64!NFAT5;;chr16:79633883..79633892,-!p6@MAF!0.22!0.64!MAF;;chr16:88497018..88497035,+!p@chr16:88497018..88497035,+!0.22!0.64!ZNF469;;chr16:89970522..89970530,+!p9@TCF25!0.22!0.64!TCF25;;chr17:36105074..36105086,-!p2@HNF1B!0.22!0.64!HNF1B;;chr17:40428334..40428345,-!p2@STAT5B!0.22!0.64!STAT5B;;chr17:40440359..40440386,+!p4@STAT5A!0.22!0.64!STAT5A;;chr17:41622731..41622764,-!p5@ETV4!0.22!0.64!ETV4;;chr17:42295682..42295731,-!p17@UBTF!0.22!0.64!UBTF;;chr17:46132044..46132080,+!p4@NFE2L1!0.22!0.64!NFE2L1;;chr17:46622143..46622152,-!p14@HOXB2!0.22!0.64!HOXB2;;chr17:46659728..46659749,-!p3@HOXB3!0.22!0.64!HOXB3;;chr17:46671108..46671147,-!p1@HOXB5!0.22!0.64!HOXB5;;chr17:46675344..46675355,-!p9@HOXB6!0.22!0.64!HOXB6;;chr17:46687935..46687950,-!p3@HOXB7!0.22!0.64!HOXB7;;chr17:7387486..7387497,-!p11@ZBTB4!0.22!0.64!ZBTB4;;chr18:42260861..42260882,+!p5@SETBP1!0.22!0.64!SETBP1;;chr18:46477326..46477341,-!p2@SMAD7!0.22!0.64!SMAD7;;chr18:52894476..52894484,-!p41@TCF4!0.22!0.64!TCF4;;chr18:52969844..52969895,-!p27@TCF4!0.22!0.64!TCF4;;chr18:52988952..52988965,-!p23@TCF4!0.22!0.64!TCF4;;chr18:53089493..53089517,-!p15@TCF4!0.22!0.64!TCF4;;chr18:53253323..53253359,-!p19@TCF4!0.22!0.64!TCF4;;chr18:53254728..53254740,-!p79@TCF4!0.22!0.64!TCF4;;chr19:12267492..12267505,-!p2@ZNF625,p3@ZNF20!0.22!0.64!ZNF625;;chr19:13135369..13135375,+!p21@NFIX!0.22!0.64!NFIX;;chr19:13136166..13136177,+!p40@NFIX!0.22!0.64!NFIX;;chr19:16435423..16435484,+!p5@KLF2!0.22!0.64!KLF2;;chr19:16435705..16435726,+!p3@KLF2!0.22!0.64!KLF2;;chr19:18391642..18391645,-!p10@JUND!0.22!0.64!JUND;; | ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000346;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002559;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001003;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002067;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002097;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002416 | |||
|ffid_belonging_in_development=CL:0000133,CL:0000134,CL:0000221 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor2.CNhs11979.11348-117G7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor2.CNhs11979.11348-117G7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor2.CNhs11979.11348-117G7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor2.CNhs11979.11348-117G7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor2.CNhs11979.11348-117G7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11348-117G7 | |id=FF:11348-117G7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000071 | ||
|is_obsolete= | |||
|library_id=CNhs11979 | |||
|library_id_phase_based=2:CNhs11979 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11348 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10007.AGTTCC.11348 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11348 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10007.AGTTCC.11348 | |||
|name=Hair Follicle Dermal Papilla Cells, donor2 | |name=Hair Follicle Dermal Papilla Cells, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11979,LSID836,release011,COMPLETED | |profile_hcage=CNhs11979,LSID836,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10007,,, | |profile_srnaseq=SRhi10007,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.62826940313168,0,0.191993234846503,0.382867705698777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587251765783293,0,0.107850623000567,0,0,0,0.642616879863663,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.410415074663166,0.215701246001134,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0.0662583741929815,0,0.527929325876121,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0.215701246001134,0,0,0,0,0,0,0,0,0.0124646839064098,0,0,0,0,0,0,-0.0727742793938564,0,0,0,0.0591454205851962,0.0653169024874735,0,0.466826533052593,0,0.215701246001134,0.117665894763427,0.281834265759035,0,0,0,0,0,0,0.466826533052593,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.244426612554886,0.568842769174919,0,0,0.045837898032161,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.117665894763427,0,0.215701246001134,0,0,0,0,0,0,0.466826533052593,0,0,0.377742811833162,0.252573403655911,-0.114918455421858,-0.143515142523472,0,0,0.028819099938847,0,0.215701246001134,0,0,0,0,0,0,0,0.612454909179156,0,0.308755211740836,0,0,0,0,0.0261891582827209,0.381114496402882,0,0.0053258205155656,0.398482271975225,0,0,0,0,0.651011526709381,0,-0.120879483793741,-0.0827201683234173,0.245214944949787,0.412644274990605,-0.04680465889238,0,0,0,-0.100187436751773,0.438887579614979,0,0,0.190680991807489,0.106084886104983,0,0,0.233877105567092,0,0.0058054218830218,0.524083919993857,0,0.169549325656694,0,0,0,0,0,0,0,0,0,0,0,0.158207779179697,0.139837936373624,0.0774406421629885,0,0.215701246001134,0.033420318134504,0.0299127881787152,0.215701246001134,-0.00928787686019036,-0.157584909955433,0.283396633881824,-0.0318975727557324,-0.23760845334551,0,-0.0866884810087797,0.302691686617269,-0.0625493223121695,-0.0069436858705787,0.641185583846928,0.363046890816837,0.0142688031371157,-0.0435604280326193,0.0848569937521094,0.14677145540703,-0.103355694551327,-0.0410715304641909,0.493706590125085,0.196663412869989,0,0,0.13819231952183,0.023443645980637,0,-0.0688379197908033,0.58671120028409,0.075921215558566,0.506812611543645,0.118717311167469,0.196073934015481,-0.32290226756063,0.416565658391747,0.331150980321472,0.0441511826312567,0.471508091493546,0,0,0,0.166416649265184,-0.0993253798060328,-0.615826173178679,0,-0.0171509287583874,0.147356984923765,0,0.228744161508182,0.16046751930081,0,0.42982048785246,-0.111950697818819,0,0,0,0,0,-0.0190934075286198,0.0854295440885599,-0.0171543155544113,0,-0.000308280464310973,0.0717005601868342,0.0151747632067766,0,-0.377118140345533,0.215701246001134,0.224288328257873,0.0665339587339148,0,0.0325446411178419,0.135154714991786,0.110373609273271,0.130633804974947,0.157254419189308,-0.177443323409047,-0.0834589646315995,0.0591454205851962,0.475110309781113,0.037855164529768,-0.0881268324752877,0,0.216078471803768,-0.0545764445027982,0.0171398174773745,-0.29609539956393,0,0.0851012387714618,0,-0.265053988360452,0,0.33587709946255,0.248153681744826,-0.223588128579553,-0.166634357025067,0,0.0958715831007294,-0.57242969177284,0,0.0550828846069071,0.0673640404573579,0,-0.150367083334639,-0.0727742793938564,0.244447758983828,0.274007691512178,0,0.0810494644764645,0,0,-0.142652233587655,0.231350495288205,0,0.199064696023357,0.297974591287352,0.367158728025994,0.350855459617659,0.215701246001134,0,0.821205837706623,-0.0255629730560589,0.215701246001134,0.182659369400036,0.140816978763082,0.432981969153385,-0.0376250954856222,0,0.124790457072041,0,0,0.375500844401509,0,0.571788976820128,0,0,-0.0341800505976902,0,0,0,0,0.148027673092881,0,0,0,0,0.107850623000567,0,0,-0.163155266751367,-0.139132084215314,0.215701246001134,0.372601907555433,0,0.215701246001134,0,0,0,-0.110803081130275,0,0.68658672730129,0.379068854807094,0.0654344031767228,0.501904271442306,0,0,0,0,0.143444360776676,0.0124646839064098,0.215701246001134,-0.131862706497632,0,0,0,0,-0.0861409897892114,0,0,0,0,-0.057730457053664,0.366069771726484,0,0,0,0.347967285516936,0,0,0,0,0.124501410767919,0,0,0.275247332114369,0,0.191191164980738,0.134119366454292,0,-0.173705645539219,1.01644489224363,0.28801404299124,0,0,0.205479401262706,0,0,-0.128766816132499,0,0.215701246001134,0,0,0,0,0,0,0,0.00138673360137789,0.0533969056614395,0,0,0,0,0,0,0,0,0,0,0.178160368231065,-0.0922240566585104,0,0,0,0,0,0,0,0.0837445999216635,0.00310930808766249,0,0,0,0,0,0.215701246001134,0,0,0.0816026707034423,0,0,0,0,0,0.527929325876121,0,0,0,0,0.406567648067404,0,0,-0.0616608861923805,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,0.45458724601922,0,0,0,0,0,0,0,0.191993234846503,0,0.359167763330151,0,0,-0.113884373708977,0,0,0,0.110904861211977,0,0.62826940313168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667065145039024,0,0,0.0897669716245309,0,0,0.110665011017603,0,0,0,0,0,0,-0.031340424028527,0.215701246001134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0348580438050884,0,0,0,0,0,0,0,0.642616879863663,0,0,-0.0920328098005262,0,0,0,0,0.0378649168674154,0,0.132334625903221,0.0600729638274975,0.0249860193278118,0,0,0,0.179027694043842,0,0,0.102847110486836,0,0.148923858582232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587251765783293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215701246001134,0,0,0,0,0,0,0,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215701246001134,0.279149295061512,0,0,0,0.146081533673107,0,0,0,0,0,0,0.359167763330151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215701246001134,0,0,0,0.426387716989504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576699611879672,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896903937181388,0,0,0,0,0.168064135340215,0,0,0,0,0,0,0,0.0186523779694966,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94489641715085,0,0,0.64115769935745,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0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| |||
|rna_box=117 | |rna_box=117 | ||
|rna_catalog_number=CA602-R10a | |rna_catalog_number=CA602-R10a | ||
| Line 56: | Line 82: | ||
|rna_tube_id=117G7 | |rna_tube_id=117G7 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10007.AGTTCC | |||
|sample_age=51 | |sample_age=51 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.41332696193106e-226!GO:0005737;cytoplasm;4.91176402454527e-180!GO:0043231;intracellular membrane-bound organelle;2.84513459817588e-140!GO:0043227;membrane-bound organelle;5.53027077944652e-140!GO:0043226;organelle;7.42349187117442e-140!GO:0043229;intracellular organelle;1.32264285414542e-139!GO:0044444;cytoplasmic part;1.73925732428876e-129!GO:0044422;organelle part;2.16474832555272e-114!GO:0044446;intracellular organelle part;4.65733971022205e-113!GO:0032991;macromolecular complex;2.98045422862316e-76!GO:0005515;protein binding;7.54628525017141e-74!GO:0030529;ribonucleoprotein complex;3.06316521238221e-66!GO:0044238;primary metabolic process;1.5645873627573e-63!GO:0044237;cellular metabolic process;3.08939446477117e-62!GO:0005739;mitochondrion;8.21600080884177e-59!GO:0043170;macromolecule metabolic process;8.6809225964398e-57!GO:0043233;organelle lumen;9.76785243440038e-57!GO:0031974;membrane-enclosed lumen;9.76785243440038e-57!GO:0031090;organelle membrane;5.54372193307684e-52!GO:0003723;RNA binding;8.18587257320134e-52!GO:0044428;nuclear part;1.2646432215339e-49!GO:0019538;protein metabolic process;1.04770197880679e-46!GO:0016043;cellular component organization and biogenesis;1.00120349538365e-42!GO:0005840;ribosome;3.77159404294149e-42!GO:0044260;cellular macromolecule metabolic process;2.7154980709768e-41!GO:0044267;cellular protein metabolic process;1.9409874587685e-40!GO:0006412;translation;5.78705400255388e-40!GO:0005634;nucleus;5.82229417220928e-40!GO:0044429;mitochondrial part;6.18273399934659e-40!GO:0043234;protein complex;1.96932740992751e-38!GO:0015031;protein transport;3.43592852642288e-38!GO:0009058;biosynthetic process;1.71840353584276e-37!GO:0003735;structural constituent of ribosome;1.97879558807734e-37!GO:0033036;macromolecule localization;2.00655715844542e-37!GO:0045184;establishment of protein localization;1.07711538446105e-35!GO:0008104;protein localization;4.40794834887367e-35!GO:0031967;organelle envelope;6.16418776544037e-35!GO:0031975;envelope;8.10193690069253e-35!GO:0005829;cytosol;2.96999929264444e-34!GO:0009059;macromolecule biosynthetic process;4.27229971065522e-34!GO:0006396;RNA processing;7.85648476368071e-34!GO:0044249;cellular biosynthetic process;1.0623696569823e-33!GO:0033279;ribosomal subunit;1.99392135361715e-32!GO:0031981;nuclear lumen;5.31506256128344e-32!GO:0046907;intracellular transport;3.66019953562465e-30!GO:0016071;mRNA metabolic process;6.68888152934782e-28!GO:0005740;mitochondrial envelope;7.41197022649872e-28!GO:0031966;mitochondrial membrane;1.69690284017495e-26!GO:0065003;macromolecular complex assembly;2.32110620498929e-26!GO:0008380;RNA splicing;1.04108353088339e-25!GO:0006886;intracellular protein transport;4.82797752968998e-25!GO:0043283;biopolymer metabolic process;5.6833042569354e-25!GO:0019866;organelle inner membrane;6.87805635632697e-25!GO:0006996;organelle organization and biogenesis;1.27731841347056e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.73784492477196e-24!GO:0005743;mitochondrial inner membrane;1.2135545993451e-23!GO:0022607;cellular component assembly;1.49776960856504e-23!GO:0006397;mRNA processing;1.71739629040982e-23!GO:0005783;endoplasmic reticulum;2.95416079734059e-22!GO:0010467;gene expression;3.2652805392862e-22!GO:0012505;endomembrane system;1.98816747970229e-21!GO:0006119;oxidative phosphorylation;8.53920375226567e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.98225888866176e-20!GO:0043228;non-membrane-bound organelle;1.27104723682912e-19!GO:0043232;intracellular non-membrane-bound organelle;1.27104723682912e-19!GO:0005654;nucleoplasm;1.34193506635587e-19!GO:0048770;pigment granule;2.23439164937165e-19!GO:0042470;melanosome;2.23439164937165e-19!GO:0005794;Golgi apparatus;2.44114487195695e-19!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.49242477602211e-19!GO:0044455;mitochondrial membrane part;3.58434436019102e-19!GO:0051649;establishment of cellular localization;1.21113814943572e-18!GO:0051641;cellular localization;1.56886610514333e-18!GO:0044445;cytosolic part;1.84208690962148e-18!GO:0044432;endoplasmic reticulum part;4.78867882654713e-18!GO:0015934;large ribosomal subunit;8.66861325593e-18!GO:0005681;spliceosome;1.24657740819096e-17!GO:0008134;transcription factor binding;5.4265263161291e-17!GO:0016462;pyrophosphatase activity;6.09505258414322e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.88242824998641e-17!GO:0006457;protein folding;7.50080511227323e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;8.74175868733368e-17!GO:0000166;nucleotide binding;1.37690614405538e-16!GO:0017111;nucleoside-triphosphatase activity;2.89145688405996e-16!GO:0044451;nucleoplasm part;3.36469661610686e-16!GO:0005746;mitochondrial respiratory chain;6.12629159485529e-16!GO:0015935;small ribosomal subunit;1.12053050924762e-15!GO:0031980;mitochondrial lumen;2.9266766240911e-15!GO:0005759;mitochondrial matrix;2.9266766240911e-15!GO:0000502;proteasome complex (sensu Eukaryota);4.70318934863578e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.13380743141699e-15!GO:0051186;cofactor metabolic process;7.72107449562348e-15!GO:0043285;biopolymer catabolic process;1.62473294787137e-14!GO:0050136;NADH dehydrogenase (quinone) activity;3.8739345708679e-14!GO:0003954;NADH dehydrogenase activity;3.8739345708679e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.8739345708679e-14!GO:0044265;cellular macromolecule catabolic process;1.07118417307136e-13!GO:0009057;macromolecule catabolic process;1.64102516811958e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;2.11834648652034e-13!GO:0048193;Golgi vesicle transport;2.38920839318331e-13!GO:0006259;DNA metabolic process;2.44405859767105e-13!GO:0019941;modification-dependent protein catabolic process;3.60737023155319e-13!GO:0043632;modification-dependent macromolecule catabolic process;3.60737023155319e-13!GO:0030163;protein catabolic process;3.71620111080425e-13!GO:0006605;protein targeting;3.87049886194228e-13!GO:0044257;cellular protein catabolic process;4.52756165137434e-13!GO:0022618;protein-RNA complex assembly;4.52756165137434e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.5784816850366e-13!GO:0016874;ligase activity;4.86063660406048e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.22499062138425e-13!GO:0008135;translation factor activity, nucleic acid binding;5.49021645717479e-13!GO:0006512;ubiquitin cycle;5.99129042762134e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.0600201322876e-13!GO:0016192;vesicle-mediated transport;7.27428785003965e-13!GO:0006511;ubiquitin-dependent protein catabolic process;7.69425576207258e-13!GO:0051082;unfolded protein binding;1.88491474792833e-12!GO:0005789;endoplasmic reticulum membrane;1.90887152275565e-12!GO:0005730;nucleolus;2.21441040861304e-12!GO:0005793;ER-Golgi intermediate compartment;2.8384391722599e-12!GO:0030964;NADH dehydrogenase complex (quinone);3.15381059317529e-12!GO:0045271;respiratory chain complex I;3.15381059317529e-12!GO:0005747;mitochondrial respiratory chain complex I;3.15381059317529e-12!GO:0044248;cellular catabolic process;3.4499031758565e-12!GO:0042775;organelle ATP synthesis coupled electron transport;4.35200631173203e-12!GO:0042773;ATP synthesis coupled electron transport;4.35200631173203e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.69245543750597e-12!GO:0017076;purine nucleotide binding;9.75081341140311e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.02795286708553e-11!GO:0032553;ribonucleotide binding;1.4938814553089e-11!GO:0032555;purine ribonucleotide binding;1.4938814553089e-11!GO:0012501;programmed cell death;1.55681052441338e-11!GO:0005761;mitochondrial ribosome;1.99417471588179e-11!GO:0000313;organellar ribosome;1.99417471588179e-11!GO:0006732;coenzyme metabolic process;2.71847433323337e-11!GO:0003712;transcription cofactor activity;3.61850593819703e-11!GO:0006915;apoptosis;4.478631168827e-11!GO:0043412;biopolymer modification;1.3521028481578e-10!GO:0008219;cell death;2.1213917003186e-10!GO:0016265;death;2.1213917003186e-10!GO:0003743;translation initiation factor activity;5.13610867466945e-10!GO:0006464;protein modification process;8.93914265717024e-10!GO:0007049;cell cycle;1.16714256076502e-09!GO:0016491;oxidoreductase activity;1.32339724720357e-09!GO:0009055;electron carrier activity;1.51064608845814e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.87957382786555e-09!GO:0000375;RNA splicing, via transesterification reactions;1.87957382786555e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.87957382786555e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.35030774140826e-09!GO:0009259;ribonucleotide metabolic process;2.59002949968612e-09!GO:0003676;nucleic acid binding;2.77948915353495e-09!GO:0003924;GTPase activity;5.28939826440514e-09!GO:0009150;purine ribonucleotide metabolic process;6.65980483434235e-09!GO:0006446;regulation of translational initiation;6.86748584993305e-09!GO:0008639;small protein conjugating enzyme activity;7.02658023160876e-09!GO:0048523;negative regulation of cellular process;7.74997467763526e-09!GO:0044431;Golgi apparatus part;7.75286737960888e-09!GO:0006163;purine nucleotide metabolic process;9.39676751979193e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.13589902527493e-08!GO:0004842;ubiquitin-protein ligase activity;1.175961770654e-08!GO:0006413;translational initiation;1.3160173870634e-08!GO:0005524;ATP binding;1.37271582978531e-08!GO:0030554;adenyl nucleotide binding;1.74456832406822e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.74900435069176e-08!GO:0019787;small conjugating protein ligase activity;1.86912028567631e-08!GO:0009260;ribonucleotide biosynthetic process;1.92200803207666e-08!GO:0032559;adenyl ribonucleotide binding;2.03762501997172e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.14606374838947e-08!GO:0006461;protein complex assembly;2.38491622382092e-08!GO:0006164;purine nucleotide biosynthetic process;2.66865556260913e-08!GO:0005635;nuclear envelope;3.19069592490301e-08!GO:0009199;ribonucleoside triphosphate metabolic process;3.33692507213784e-08!GO:0016604;nuclear body;3.61394459384502e-08!GO:0005788;endoplasmic reticulum lumen;3.67977867781987e-08!GO:0009141;nucleoside triphosphate metabolic process;3.87214818694818e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.43903940354766e-08!GO:0009144;purine nucleoside triphosphate metabolic process;4.43903940354766e-08!GO:0015986;ATP synthesis coupled proton transport;4.7298203195659e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.7298203195659e-08!GO:0043687;post-translational protein modification;4.74463168118057e-08!GO:0008565;protein transporter activity;4.77059219237973e-08!GO:0042254;ribosome biogenesis and assembly;4.77059219237973e-08!GO:0006913;nucleocytoplasmic transport;4.78379263372637e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.41946375675679e-08!GO:0030120;vesicle coat;5.54010230831252e-08!GO:0030662;coated vesicle membrane;5.54010230831252e-08!GO:0009056;catabolic process;6.24804157304565e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;7.4844886836325e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;8.00887892114606e-08!GO:0009060;aerobic respiration;8.21529789844832e-08!GO:0045333;cellular respiration;9.41554064294514e-08!GO:0051169;nuclear transport;9.94934619949049e-08!GO:0048475;coated membrane;1.05002087507618e-07!GO:0030117;membrane coat;1.05002087507618e-07!GO:0008361;regulation of cell size;1.1554420570404e-07!GO:0042623;ATPase activity, coupled;1.18028013515614e-07!GO:0048519;negative regulation of biological process;1.18910229264244e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.27565757867238e-07!GO:0016049;cell growth;1.48985873831388e-07!GO:0046034;ATP metabolic process;1.56569106063318e-07!GO:0031965;nuclear membrane;1.59649377663841e-07!GO:0019829;cation-transporting ATPase activity;1.78011478988406e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.83432620662233e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.83432620662233e-07!GO:0022402;cell cycle process;1.9276039176384e-07!GO:0006366;transcription from RNA polymerase II promoter;2.02819270738553e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.02819270738553e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.1738916421687e-07!GO:0016070;RNA metabolic process;2.20207847198623e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.41837705660595e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.41837705660595e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.49321973799244e-07!GO:0016881;acid-amino acid ligase activity;2.93278356968008e-07!GO:0006323;DNA packaging;3.03685501262351e-07!GO:0016887;ATPase activity;3.15791037814101e-07!GO:0065004;protein-DNA complex assembly;3.30746019515767e-07!GO:0005768;endosome;3.33962693981204e-07!GO:0017038;protein import;3.52415745577967e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.56392244835832e-07!GO:0051188;cofactor biosynthetic process;3.80707329441319e-07!GO:0051246;regulation of protein metabolic process;4.48224311317223e-07!GO:0000139;Golgi membrane;4.63996615840153e-07!GO:0007005;mitochondrion organization and biogenesis;5.79924816710597e-07!GO:0005773;vacuole;6.7275043794422e-07!GO:0006399;tRNA metabolic process;7.08681859013713e-07!GO:0006754;ATP biosynthetic process;7.61791664733896e-07!GO:0006753;nucleoside phosphate metabolic process;7.61791664733896e-07!GO:0001558;regulation of cell growth;7.63968134832899e-07!GO:0016607;nuclear speck;8.38773738496341e-07!GO:0016469;proton-transporting two-sector ATPase complex;8.50505869823149e-07!GO:0051276;chromosome organization and biogenesis;8.52356082033183e-07!GO:0009117;nucleotide metabolic process;1.26580420274923e-06!GO:0042981;regulation of apoptosis;1.37702608754304e-06!GO:0043067;regulation of programmed cell death;1.38768680789078e-06!GO:0044453;nuclear membrane part;1.52900484479733e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.60912504032124e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.60912504032124e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.60912504032124e-06!GO:0031252;leading edge;1.81708506458619e-06!GO:0016787;hydrolase activity;2.09945857332606e-06!GO:0004298;threonine endopeptidase activity;2.20693349797483e-06!GO:0000074;regulation of progression through cell cycle;2.26167179813781e-06!GO:0000278;mitotic cell cycle;2.28308254014317e-06!GO:0051726;regulation of cell cycle;2.72614848085271e-06!GO:0043038;amino acid activation;3.41841171261101e-06!GO:0006418;tRNA aminoacylation for protein translation;3.41841171261101e-06!GO:0043039;tRNA aminoacylation;3.41841171261101e-06!GO:0016023;cytoplasmic membrane-bound vesicle;3.61340039773721e-06!GO:0005798;Golgi-associated vesicle;3.68135925251854e-06!GO:0051187;cofactor catabolic process;3.8905096271447e-06!GO:0006091;generation of precursor metabolites and energy;4.03599152134561e-06!GO:0003714;transcription corepressor activity;4.26262553085472e-06!GO:0006099;tricarboxylic acid cycle;4.36716748540934e-06!GO:0046356;acetyl-CoA catabolic process;4.36716748540934e-06!GO:0006333;chromatin assembly or disassembly;4.62620481978681e-06!GO:0031988;membrane-bound vesicle;4.89473761209548e-06!GO:0045259;proton-transporting ATP synthase complex;5.13063682889338e-06!GO:0030532;small nuclear ribonucleoprotein complex;5.28003624775619e-06!GO:0006974;response to DNA damage stimulus;5.32659644417941e-06!GO:0044440;endosomal part;6.11001938675292e-06!GO:0010008;endosome membrane;6.11001938675292e-06!GO:0043069;negative regulation of programmed cell death;6.29758407614045e-06!GO:0005525;GTP binding;6.34838123996436e-06!GO:0000323;lytic vacuole;7.06672182746154e-06!GO:0005764;lysosome;7.06672182746154e-06!GO:0043066;negative regulation of apoptosis;8.9654316036779e-06!GO:0006084;acetyl-CoA metabolic process;1.00132637594509e-05!GO:0008026;ATP-dependent helicase activity;1.10725527136908e-05!GO:0004386;helicase activity;1.15233563110797e-05!GO:0006752;group transfer coenzyme metabolic process;1.2082315463385e-05!GO:0009109;coenzyme catabolic process;1.22239779051885e-05!GO:0030133;transport vesicle;1.31336993448571e-05!GO:0051789;response to protein stimulus;1.31754553528042e-05!GO:0006986;response to unfolded protein;1.31754553528042e-05!GO:0006916;anti-apoptosis;1.38651085698755e-05!GO:0016564;transcription repressor activity;1.40967766366551e-05!GO:0032446;protein modification by small protein conjugation;1.40967766366551e-05!GO:0003713;transcription coactivator activity;1.46807213930537e-05!GO:0000151;ubiquitin ligase complex;1.65039142679213e-05!GO:0009108;coenzyme biosynthetic process;1.65203746663209e-05!GO:0016567;protein ubiquitination;1.72246306284123e-05!GO:0045786;negative regulation of progression through cell cycle;1.75725777178296e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.83244161555516e-05!GO:0005667;transcription factor complex;1.87976702741071e-05!GO:0050794;regulation of cellular process;2.36300240205265e-05!GO:0006793;phosphorus metabolic process;2.36346891992938e-05!GO:0006796;phosphate metabolic process;2.36346891992938e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.58209220756792e-05!GO:0006334;nucleosome assembly;2.88747814227398e-05!GO:0007243;protein kinase cascade;3.50021158746512e-05!GO:0031410;cytoplasmic vesicle;3.68397954255988e-05!GO:0005762;mitochondrial large ribosomal subunit;3.78399294787493e-05!GO:0000315;organellar large ribosomal subunit;3.78399294787493e-05!GO:0031982;vesicle;3.9093183093969e-05!GO:0016563;transcription activator activity;4.37650187284487e-05!GO:0015980;energy derivation by oxidation of organic compounds;4.4477515535023e-05!GO:0048522;positive regulation of cellular process;4.67218431371482e-05!GO:0031324;negative regulation of cellular metabolic process;4.7889642733183e-05!GO:0006364;rRNA processing;4.80080959462123e-05!GO:0065002;intracellular protein transport across a membrane;4.87523653458183e-05!GO:0006613;cotranslational protein targeting to membrane;5.27552078354272e-05!GO:0019867;outer membrane;5.27552078354272e-05!GO:0051170;nuclear import;5.57325949997442e-05!GO:0016740;transferase activity;5.93672704416193e-05!GO:0003697;single-stranded DNA binding;6.05008586834056e-05!GO:0031497;chromatin assembly;6.05008586834056e-05!GO:0005770;late endosome;6.33690967202764e-05!GO:0016072;rRNA metabolic process;6.41336343743259e-05!GO:0031968;organelle outer membrane;6.42336374409256e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.67693709668082e-05!GO:0006606;protein import into nucleus;7.97199566508898e-05!GO:0030867;rough endoplasmic reticulum membrane;8.02045856838506e-05!GO:0032561;guanyl ribonucleotide binding;8.42208054855074e-05!GO:0019001;guanyl nucleotide binding;8.42208054855074e-05!GO:0016853;isomerase activity;9.7781142635567e-05!GO:0016310;phosphorylation;0.000102686700830192!GO:0005905;coated pit;0.000106057611972336!GO:0005643;nuclear pore;0.000107947159114298!GO:0033116;ER-Golgi intermediate compartment membrane;0.000111228381255173!GO:0000785;chromatin;0.000113472827691199!GO:0040008;regulation of growth;0.000120815554532399!GO:0045454;cell redox homeostasis;0.000134863756173098!GO:0030029;actin filament-based process;0.000181335156304987!GO:0006281;DNA repair;0.000210948816231303!GO:0044262;cellular carbohydrate metabolic process;0.000210948816231303!GO:0016568;chromatin modification;0.000225683471286541!GO:0009892;negative regulation of metabolic process;0.000226195328714195!GO:0016126;sterol biosynthetic process;0.00022826582434157!GO:0000245;spliceosome assembly;0.000228765852614423!GO:0005694;chromosome;0.000246588615045252!GO:0009719;response to endogenous stimulus;0.000254069911824659!GO:0005741;mitochondrial outer membrane;0.000266100083618812!GO:0046930;pore complex;0.000271345088836767!GO:0019899;enzyme binding;0.000302990133585919!GO:0003724;RNA helicase activity;0.000305410669666647!GO:0006612;protein targeting to membrane;0.00031319876319601!GO:0015630;microtubule cytoskeleton;0.000318210385307952!GO:0043021;ribonucleoprotein binding;0.000353662243154536!GO:0043566;structure-specific DNA binding;0.000359968345420442!GO:0007010;cytoskeleton organization and biogenesis;0.00038143987167165!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000387652592141156!GO:0016779;nucleotidyltransferase activity;0.000421304647468175!GO:0005791;rough endoplasmic reticulum;0.00042695845639255!GO:0016044;membrane organization and biogenesis;0.000435375176462086!GO:0005885;Arp2/3 protein complex;0.000435736149139306!GO:0008250;oligosaccharyl transferase complex;0.000467376360603942!GO:0009165;nucleotide biosynthetic process;0.000480544238489005!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00049802984022666!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000530005174711578!GO:0015399;primary active transmembrane transporter activity;0.000530005174711578!GO:0051427;hormone receptor binding;0.000556725469314166!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000566705048376707!GO:0005048;signal sequence binding;0.000587048836754275!GO:0009967;positive regulation of signal transduction;0.000663383338403196!GO:0043623;cellular protein complex assembly;0.000761550138161437!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000797258666004448!GO:0016859;cis-trans isomerase activity;0.00088524644834885!GO:0048518;positive regulation of biological process;0.000897438899606558!GO:0005769;early endosome;0.000919316537561544!GO:0022403;cell cycle phase;0.000924987895344346!GO:0030663;COPI coated vesicle membrane;0.000940516162309327!GO:0030126;COPI vesicle coat;0.000940516162309327!GO:0044427;chromosomal part;0.000944371271151992!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000973114461873663!GO:0050789;regulation of biological process;0.000993546492788022!GO:0008654;phospholipid biosynthetic process;0.00103006098134732!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00106000602539615!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00109449646435182!GO:0035257;nuclear hormone receptor binding;0.00111412009669776!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00124872060445799!GO:0030658;transport vesicle membrane;0.00124872060445799!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00126809165319145!GO:0051329;interphase of mitotic cell cycle;0.00126809165319145!GO:0004576;oligosaccharyl transferase activity;0.00126809165319145!GO:0051920;peroxiredoxin activity;0.00126809165319145!GO:0006403;RNA localization;0.00134849924621908!GO:0004177;aminopeptidase activity;0.00136522096262086!GO:0050657;nucleic acid transport;0.00144012130790889!GO:0051236;establishment of RNA localization;0.00144012130790889!GO:0050658;RNA transport;0.00144012130790889!GO:0030176;integral to endoplasmic reticulum membrane;0.00148487755097901!GO:0044420;extracellular matrix part;0.00158664581452464!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00158887621448692!GO:0048468;cell development;0.00167488750895395!GO:0018196;peptidyl-asparagine modification;0.00170143316116111!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00170143316116111!GO:0043284;biopolymer biosynthetic process;0.00170230798800906!GO:0007264;small GTPase mediated signal transduction;0.00175782542431749!GO:0019843;rRNA binding;0.00175791128779964!GO:0016481;negative regulation of transcription;0.00177639936080689!GO:0030118;clathrin coat;0.00183258466498052!GO:0016363;nuclear matrix;0.00188685412981102!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00190792886017405!GO:0045792;negative regulation of cell size;0.0019374236337117!GO:0030308;negative regulation of cell growth;0.00210639062431026!GO:0030137;COPI-coated vesicle;0.00211015672259866!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00213823440559215!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00213823440559215!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00213823440559215!GO:0006839;mitochondrial transport;0.00224355758019391!GO:0051325;interphase;0.00228290885537308!GO:0000087;M phase of mitotic cell cycle;0.00237673674039439!GO:0006260;DNA replication;0.00241064353563601!GO:0043492;ATPase activity, coupled to movement of substances;0.00263549552733054!GO:0007067;mitosis;0.00269501305306704!GO:0007050;cell cycle arrest;0.00275616706598881!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00277483014248999!GO:0030132;clathrin coat of coated pit;0.00284690667951793!GO:0030660;Golgi-associated vesicle membrane;0.00286836944593069!GO:0006414;translational elongation;0.0030241020744609!GO:0015992;proton transport;0.00314239130224494!GO:0006979;response to oxidative stress;0.00317335499954162!GO:0006818;hydrogen transport;0.00324921645847293!GO:0008186;RNA-dependent ATPase activity;0.00330797183926257!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00330797183926257!GO:0043488;regulation of mRNA stability;0.00351804756514436!GO:0043487;regulation of RNA stability;0.00351804756514436!GO:0042802;identical protein binding;0.0035756235568465!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00360699275489686!GO:0000314;organellar small ribosomal subunit;0.00374246971872743!GO:0005763;mitochondrial small ribosomal subunit;0.00374246971872743!GO:0030127;COPII vesicle coat;0.00391004124568065!GO:0012507;ER to Golgi transport vesicle membrane;0.00391004124568065!GO:0030027;lamellipodium;0.00392848650040872!GO:0001726;ruffle;0.00400750734322986!GO:0008092;cytoskeletal protein binding;0.00401202328212833!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00402959413189171!GO:0008047;enzyme activator activity;0.00436916323208329!GO:0005581;collagen;0.00446680535280585!GO:0043681;protein import into mitochondrion;0.00457614620283768!GO:0030134;ER to Golgi transport vesicle;0.00460619262961203!GO:0006509;membrane protein ectodomain proteolysis;0.0046989162835678!GO:0033619;membrane protein proteolysis;0.0046989162835678!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00477597211308642!GO:0006626;protein targeting to mitochondrion;0.00483552351524501!GO:0051252;regulation of RNA metabolic process;0.00490762855918465!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00502038660697967!GO:0003729;mRNA binding;0.00509902164433308!GO:0051301;cell division;0.00515438257220462!GO:0048500;signal recognition particle;0.00528729071896448!GO:0006695;cholesterol biosynthetic process;0.00532143744206269!GO:0048471;perinuclear region of cytoplasm;0.00532143744206269!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00552110629425736!GO:0065009;regulation of a molecular function;0.0057018351790574!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0058707054891983!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0058707054891983!GO:0006891;intra-Golgi vesicle-mediated transport;0.00600934129269302!GO:0017166;vinculin binding;0.00620203765880725!GO:0005774;vacuolar membrane;0.00639804046759624!GO:0051128;regulation of cellular component organization and biogenesis;0.00650193687823785!GO:0005813;centrosome;0.0065459345151914!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00657773054961769!GO:0008610;lipid biosynthetic process;0.00691825250893438!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00717494109873845!GO:0046474;glycerophospholipid biosynthetic process;0.00750307138565752!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00750307138565752!GO:0000902;cell morphogenesis;0.00768072935684541!GO:0032989;cellular structure morphogenesis;0.00768072935684541!GO:0046483;heterocycle metabolic process;0.0078796363077445!GO:0005869;dynactin complex;0.00793789136265102!GO:0007006;mitochondrial membrane organization and biogenesis;0.00798617115310623!GO:0004004;ATP-dependent RNA helicase activity;0.00798617115310623!GO:0050662;coenzyme binding;0.00808944787502725!GO:0030119;AP-type membrane coat adaptor complex;0.00812341114756661!GO:0030659;cytoplasmic vesicle membrane;0.00826154712559485!GO:0006740;NADPH regeneration;0.00843955846785357!GO:0006098;pentose-phosphate shunt;0.00843955846785357!GO:0051287;NAD binding;0.00848538574441611!GO:0031418;L-ascorbic acid binding;0.00859340873655589!GO:0006289;nucleotide-excision repair;0.00883724303947462!GO:0031543;peptidyl-proline dioxygenase activity;0.00884459255903204!GO:0019798;procollagen-proline dioxygenase activity;0.00890631937793372!GO:0006402;mRNA catabolic process;0.00895987470648994!GO:0007160;cell-matrix adhesion;0.00895987470648994!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00901836620499477!GO:0022890;inorganic cation transmembrane transporter activity;0.00904694974527259!GO:0031589;cell-substrate adhesion;0.0094748928913913!GO:0031902;late endosome membrane;0.00964791302322677!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00974987570170827!GO:0015002;heme-copper terminal oxidase activity;0.00974987570170827!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00974987570170827!GO:0004129;cytochrome-c oxidase activity;0.00974987570170827!GO:0051168;nuclear export;0.0100115244625254!GO:0048487;beta-tubulin binding;0.01004239140396!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0101043693253736!GO:0008154;actin polymerization and/or depolymerization;0.0104670789911911!GO:0003746;translation elongation factor activity;0.0105438269275806!GO:0000786;nucleosome;0.0112917636642132!GO:0030032;lamellipodium biogenesis;0.0114594851748766!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0114665750868009!GO:0031529;ruffle organization and biogenesis;0.0120335892555976!GO:0005815;microtubule organizing center;0.0120579846425943!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0122568159555152!GO:0045047;protein targeting to ER;0.0122568159555152!GO:0006778;porphyrin metabolic process;0.0124536831349714!GO:0033013;tetrapyrrole metabolic process;0.0124536831349714!GO:0006383;transcription from RNA polymerase III promoter;0.0124851620006382!GO:0007040;lysosome organization and biogenesis;0.0124851620006382!GO:0005684;U2-dependent spliceosome;0.012878002171616!GO:0006118;electron transport;0.0134083292614398!GO:0051028;mRNA transport;0.0134083292614398!GO:0030131;clathrin adaptor complex;0.0134441848623987!GO:0045936;negative regulation of phosphate metabolic process;0.0135618410812466!GO:0008022;protein C-terminus binding;0.0135996613484393!GO:0044433;cytoplasmic vesicle part;0.0136319088951376!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0137952972143739!GO:0045941;positive regulation of transcription;0.0138745028890415!GO:0005096;GTPase activator activity;0.014576069441504!GO:0008180;signalosome;0.0146415135155236!GO:0006790;sulfur metabolic process;0.0146454197597618!GO:0044437;vacuolar part;0.0147272204195999!GO:0006082;organic acid metabolic process;0.0149094928360732!GO:0043022;ribosome binding;0.0149719566051907!GO:0019752;carboxylic acid metabolic process;0.0151734757027804!GO:0006897;endocytosis;0.015432779804291!GO:0010324;membrane invagination;0.015432779804291!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.015432779804291!GO:0045926;negative regulation of growth;0.0154491648397009!GO:0031072;heat shock protein binding;0.015552923321718!GO:0005862;muscle thin filament tropomyosin;0.0161495877380756!GO:0016197;endosome transport;0.0168977614139153!GO:0000049;tRNA binding;0.0169683521064749!GO:0001527;microfibril;0.0171115130013293!GO:0006352;transcription initiation;0.0173447609011053!GO:0046519;sphingoid metabolic process;0.0173447609011053!GO:0005765;lysosomal membrane;0.0182654333738936!GO:0008632;apoptotic program;0.0183765693663421!GO:0045893;positive regulation of transcription, DNA-dependent;0.0190174860317493!GO:0035035;histone acetyltransferase binding;0.0190174860317493!GO:0007033;vacuole organization and biogenesis;0.0190174860317493!GO:0030125;clathrin vesicle coat;0.0193642310847517!GO:0030665;clathrin coated vesicle membrane;0.0193642310847517!GO:0051101;regulation of DNA binding;0.0196394359611484!GO:0006892;post-Golgi vesicle-mediated transport;0.0196659570031897!GO:0008139;nuclear localization sequence binding;0.0196856335096971!GO:0030041;actin filament polymerization;0.0198854585938299!GO:0043433;negative regulation of transcription factor activity;0.0208729965591316!GO:0030833;regulation of actin filament polymerization;0.0210176369258612!GO:0003899;DNA-directed RNA polymerase activity;0.021597442528205!GO:0031625;ubiquitin protein ligase binding;0.0217061081447744!GO:0007030;Golgi organization and biogenesis;0.0220818767112227!GO:0008238;exopeptidase activity;0.0222852981157973!GO:0006401;RNA catabolic process;0.0223814280698943!GO:0008312;7S RNA binding;0.0231126377237604!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0236705981767617!GO:0033043;regulation of organelle organization and biogenesis;0.0236705981767617!GO:0030521;androgen receptor signaling pathway;0.0237441056213477!GO:0042168;heme metabolic process;0.0238250880648657!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0240478552505002!GO:0010257;NADH dehydrogenase complex assembly;0.0240478552505002!GO:0033108;mitochondrial respiratory chain complex assembly;0.0240478552505002!GO:0030145;manganese ion binding;0.0246526778184115!GO:0003756;protein disulfide isomerase activity;0.0252919552603358!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0252919552603358!GO:0046467;membrane lipid biosynthetic process;0.0256020576587825!GO:0008430;selenium binding;0.0264213751357903!GO:0006595;polyamine metabolic process;0.0264746205109365!GO:0022408;negative regulation of cell-cell adhesion;0.0266181293788403!GO:0031272;regulation of pseudopodium formation;0.0266373819496354!GO:0031269;pseudopodium formation;0.0266373819496354!GO:0031344;regulation of cell projection organization and biogenesis;0.0266373819496354!GO:0031268;pseudopodium organization and biogenesis;0.0266373819496354!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0266373819496354!GO:0031274;positive regulation of pseudopodium formation;0.0266373819496354!GO:0006354;RNA elongation;0.0268655128180827!GO:0046489;phosphoinositide biosynthetic process;0.0275726847667755!GO:0000082;G1/S transition of mitotic cell cycle;0.0278827389437167!GO:0016408;C-acyltransferase activity;0.0279407485548432!GO:0051540;metal cluster binding;0.0280334997299181!GO:0051536;iron-sulfur cluster binding;0.0280334997299181!GO:0033559;unsaturated fatty acid metabolic process;0.0280515697506802!GO:0006636;unsaturated fatty acid biosynthetic process;0.0280515697506802!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0281142149543944!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0281142149543944!GO:0048144;fibroblast proliferation;0.0284167737447738!GO:0048145;regulation of fibroblast proliferation;0.0284167737447738!GO:0000209;protein polyubiquitination;0.0287223759498016!GO:0050811;GABA receptor binding;0.0295009599945419!GO:0007242;intracellular signaling cascade;0.02951464085871!GO:0051098;regulation of binding;0.029642902129051!GO:0051059;NF-kappaB binding;0.03028864494857!GO:0033673;negative regulation of kinase activity;0.031164250973117!GO:0006469;negative regulation of protein kinase activity;0.031164250973117!GO:0012506;vesicle membrane;0.031303651713739!GO:0008538;proteasome activator activity;0.0316888685957832!GO:0042326;negative regulation of phosphorylation;0.0328656020603778!GO:0006739;NADP metabolic process;0.0332363285542186!GO:0031124;mRNA 3'-end processing;0.0339202264683787!GO:0008033;tRNA processing;0.0339737728383901!GO:0003711;transcription elongation regulator activity;0.0341071811906705!GO:0004228;gelatinase A activity;0.0349556466464178!GO:0001955;blood vessel maturation;0.0349556466464178!GO:0003690;double-stranded DNA binding;0.0353403781289059!GO:0001953;negative regulation of cell-matrix adhesion;0.0356671987564267!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0366808532184944!GO:0004784;superoxide dismutase activity;0.0366808532184944!GO:0031301;integral to organelle membrane;0.0367532169247073!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0368444956116768!GO:0043065;positive regulation of apoptosis;0.0368444956116768!GO:0006672;ceramide metabolic process;0.0374652057221288!GO:0005819;spindle;0.0377154186804881!GO:0009112;nucleobase metabolic process;0.0377566219879964!GO:0005583;fibrillar collagen;0.0383217727333289!GO:0051348;negative regulation of transferase activity;0.0383932604339427!GO:0000059;protein import into nucleus, docking;0.0386776233335665!GO:0030100;regulation of endocytosis;0.0386776233335665!GO:0006779;porphyrin biosynthetic process;0.0387706568866554!GO:0033014;tetrapyrrole biosynthetic process;0.0387706568866554!GO:0016584;nucleosome positioning;0.0388592387071068!GO:0005100;Rho GTPase activator activity;0.0388592387071068!GO:0051270;regulation of cell motility;0.0388592387071068!GO:0005832;chaperonin-containing T-complex;0.038913260122394!GO:0046979;TAP2 binding;0.0390934750781467!GO:0046977;TAP binding;0.0390934750781467!GO:0046978;TAP1 binding;0.0390934750781467!GO:0015631;tubulin binding;0.0393597035963547!GO:0043126;regulation of 1-phosphatidylinositol 4-kinase activity;0.0393597035963547!GO:0046813;virion attachment, binding of host cell surface receptor;0.0393597035963547!GO:0043128;positive regulation of 1-phosphatidylinositol 4-kinase activity;0.0393597035963547!GO:0030880;RNA polymerase complex;0.0394241824719042!GO:0005520;insulin-like growth factor binding;0.0394782466074506!GO:0046426;negative regulation of JAK-STAT cascade;0.0402558784621619!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0411882730855806!GO:0043068;positive regulation of programmed cell death;0.041348288832575!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.041862090896742!GO:0006984;ER-nuclear signaling pathway;0.0421446470352272!GO:0005637;nuclear inner membrane;0.0422322950716888!GO:0006007;glucose catabolic process;0.0428250045141051!GO:0006635;fatty acid beta-oxidation;0.0433236650330147!GO:0009966;regulation of signal transduction;0.0445638173094859!GO:0044452;nucleolar part;0.0449831751729779!GO:0048146;positive regulation of fibroblast proliferation;0.0451029701115808!GO:0005874;microtubule;0.0451830254992839!GO:0035258;steroid hormone receptor binding;0.0456778660708605!GO:0006376;mRNA splice site selection;0.0457855141452497!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0457855141452497!GO:0045045;secretory pathway;0.0460686405572236!GO:0007034;vacuolar transport;0.0462549945506584!GO:0004860;protein kinase inhibitor activity;0.0463529815740724!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0464308613625583!GO:0003955;NAD(P)H dehydrogenase (quinone) activity;0.0471566094560168!GO:0016860;intramolecular oxidoreductase activity;0.0473979701551396!GO:0005975;carbohydrate metabolic process;0.0476588813264676!GO:0046966;thyroid hormone receptor binding;0.0476832544218132!GO:0051539;4 iron, 4 sulfur cluster binding;0.047749893026777!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0486698299838046!GO:0030911;TPR domain binding;0.049044868390033!GO:0045334;clathrin-coated endocytic vesicle;0.0492290769500693 | |||
|sample_id=11348 | |sample_id=11348 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=hair follicle | |sample_tissue=hair follicle | ||
|top_motifs=ALX4:2.57749610415;ZNF238:2.50235750771;UFEwm:2.37729176772;HES1:2.24515657159;ESR1:1.88587774927;HMX1:1.64295272444;MYBL2:1.64233475829;TFAP4:1.56695592535;GLI1..3:1.52700942848;PAX1,9:1.51844918477;TFAP2{A,C}:1.49548120181;NKX2-2,8:1.4663914895;RXR{A,B,G}:1.44278928805;ZBTB6:1.4237027752;FOXL1:1.40465026993;ZNF423:1.35397985565;GTF2A1,2:1.3320352085;XBP1:1.33193878748;KLF4:1.2984500464;EN1,2:1.29741803674;ATF6:1.26804761463;TP53:1.17653971602;GZF1:1.15442227585;HAND1,2:1.10104095271;NFIX:1.03462243056;HOX{A5,B5}:1.00041040051;PAX5:0.980429764188;NKX3-1:0.970548228659;RXRA_VDR{dimer}:0.959674993447;SRF:0.918675463683;NR6A1:0.916688671673;ZIC1..3:0.894020193142;EBF1:0.88051334408;MAZ:0.866740885773;NFATC1..3:0.835598032619;NFE2L1:0.824051770244;GTF2I:0.820913545185;XCPE1{core}:0.808347531526;TAL1_TCF{3,4,12}:0.777579725853;NKX3-2:0.771138776947;TEAD1:0.766765169726;GCM1,2:0.756711794889;MZF1:0.736725520899;NR3C1:0.734684610545;NKX2-1,4:0.72387233375;NANOG{mouse}:0.680710545901;SPZ1:0.663918913162;PATZ1:0.631206435412;GATA4:0.607065711772;TFAP2B:0.570976629956;TFCP2:0.546140979935;FOXD3:0.53127026465;HIF1A:0.526243743358;TLX1..3_NFIC{dimer}:0.506163314527;TOPORS:0.505040494444;GFI1B:0.494624603724;ZNF148:0.427574971483;IRF1,2:0.406803880569;YY1:0.367849706036;NR1H4:0.364595378655;RREB1:0.344852494767;HIC1:0.341891239634;TBX4,5:0.310425192085;LHX3,4:0.310021451935;TBP:0.278898187843;SMAD1..7,9:0.272840843793;HOX{A6,A7,B6,B7}:0.225382338667;SP1:0.221695352007;MTF1:0.19505530684;DMAP1_NCOR{1,2}_SMARC:0.184236103616;MYFfamily:0.181082092758;EGR1..3:0.16282165921;MAFB:0.159650890072;PRDM1:0.153654605731;IKZF1:0.149323152318;NFE2L2:0.135476637543;EVI1:0.130399699438;HSF1,2:0.114943160197;HNF1A:0.107686781688;HMGA1,2:0.100201271077;MTE{core}:0.0863465667495;REST:0.064644121781;TEF:0.0561083498734;ZNF384:0.0533937146941;SOX5:0.0525726823053;ESRRA:0.0252459976335;HOX{A4,D4}:0.0250253963616;IRF7:-0.0163742240701;GFI1:-0.0197753024922;AIRE:-0.0276144014747;FOXO1,3,4:-0.0692678998522;STAT2,4,6:-0.0721882730227;SOX17:-0.0835473086096;TFDP1:-0.0919530185181;BACH2:-0.10532065502;PPARG:-0.164513984802;ONECUT1,2:-0.165358424518;POU2F1..3:-0.176071603177;NHLH1,2:-0.185501274404;AR:-0.186875806143;NKX6-1,2:-0.194856855902;EP300:-0.203127459441;NFKB1_REL_RELA:-0.203441993736;FOS_FOS{B,L1}_JUN{B,D}:-0.209845776114;T:-0.213941245231;HLF:-0.218129389165;LEF1_TCF7_TCF7L1,2:-0.225123013924;POU5F1:-0.229258710705;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.234772563548;ZBTB16:-0.247907622804;POU3F1..4:-0.25592489909;MED-1{core}:-0.258722696888;ARID5B:-0.266580645184;DBP:-0.269175219934;NR5A1,2:-0.294456790038;RUNX1..3:-0.300012261978;ZFP161:-0.310109618186;MEF2{A,B,C,D}:-0.310322114196;HNF4A_NR2F1,2:-0.338606713097;NFE2:-0.361202170043;POU6F1:-0.388120382608;ZNF143:-0.405910094216;CDC5L:-0.409038556156;NKX2-3_NKX2-5:-0.418350203019;HOXA9_MEIS1:-0.472773709506;SPI1:-0.48311575474;SNAI1..3:-0.502978527556;MYB:-0.511945991122;STAT1,3:-0.517683029063;ETS1,2:-0.520580072435;SOX{8,9,10}:-0.529611317922;RFX1:-0.530948031247;FOSL2:-0.5548221209;PAX3,7:-0.571610443025;FOXM1:-0.586365255707;STAT5{A,B}:-0.590696534213;bHLH_family:-0.592999729472;PBX1:-0.610419652811;FOXA2:-0.61070526222;POU1F1:-0.61097014956;NFIL3:-0.642744574771;SPIB:-0.657367786487;CEBPA,B_DDIT3:-0.662827290449;PAX8:-0.720765829106;AHR_ARNT_ARNT2:-0.723474742078;ADNP_IRX_SIX_ZHX:-0.723796261841;IKZF2:-0.737159812371;PRRX1,2:-0.739231147496;ZEB1:-0.740515314932;CRX:-0.748830331375;ELK1,4_GABP{A,B1}:-0.762617700632;NFY{A,B,C}:-0.768607394616;ATF5_CREB3:-0.784692404684;ATF4:-0.809155625758;NRF1:-0.809888743668;FOXP1:-0.812704313801;FOXP3:-0.828182591257;PAX2:-0.841431532204;FOX{D1,D2}:-0.846845949974;PAX4:-0.850376913651;CDX1,2,4:-0.85059650413;TGIF1:-0.89826307015;RORA:-0.899433764985;MYOD1:-0.904089057702;FOXN1:-0.920724216831;PITX1..3:-0.922388531393;PAX6:-0.959691564329;OCT4_SOX2{dimer}:-0.963475471906;ELF1,2,4:-0.965086027558;CUX2:-0.970722074741;RFX2..5_RFXANK_RFXAP:-1.00329264857;E2F1..5:-1.01192429039;SREBF1,2:-1.01829892495;LMO2:-1.02036825573;CREB1:-1.08471667888;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.09206577544;ALX1:-1.1018531881;JUN:-1.10842510368;BPTF:-1.11846890031;SOX2:-1.15971872472;GATA6:-1.22584673003;RBPJ:-1.31544003733;ATF2:-1.3164320932;FOXQ1:-1.38330033517;HBP1_HMGB_SSRP1_UBTF:-1.46523556159;BREu{core}:-1.47986937215;FOX{I1,J2}:-1.58205351556;PDX1:-1.68800062497;NANOG:-1.71026713981;FOX{F1,F2,J1}:-1.98184137724;TLX2:-2.19874570822;VSX1,2:-2.28942335261 | |top_motifs=ALX4:2.57749610415;ZNF238:2.50235750771;UFEwm:2.37729176772;HES1:2.24515657159;ESR1:1.88587774927;HMX1:1.64295272444;MYBL2:1.64233475829;TFAP4:1.56695592535;GLI1..3:1.52700942848;PAX1,9:1.51844918477;TFAP2{A,C}:1.49548120181;NKX2-2,8:1.4663914895;RXR{A,B,G}:1.44278928805;ZBTB6:1.4237027752;FOXL1:1.40465026993;ZNF423:1.35397985565;GTF2A1,2:1.3320352085;XBP1:1.33193878748;KLF4:1.2984500464;EN1,2:1.29741803674;ATF6:1.26804761463;TP53:1.17653971602;GZF1:1.15442227585;HAND1,2:1.10104095271;NFIX:1.03462243056;HOX{A5,B5}:1.00041040051;PAX5:0.980429764188;NKX3-1:0.970548228659;RXRA_VDR{dimer}:0.959674993447;SRF:0.918675463683;NR6A1:0.916688671673;ZIC1..3:0.894020193142;EBF1:0.88051334408;MAZ:0.866740885773;NFATC1..3:0.835598032619;NFE2L1:0.824051770244;GTF2I:0.820913545185;XCPE1{core}:0.808347531526;TAL1_TCF{3,4,12}:0.777579725853;NKX3-2:0.771138776947;TEAD1:0.766765169726;GCM1,2:0.756711794889;MZF1:0.736725520899;NR3C1:0.734684610545;NKX2-1,4:0.72387233375;NANOG{mouse}:0.680710545901;SPZ1:0.663918913162;PATZ1:0.631206435412;GATA4:0.607065711772;TFAP2B:0.570976629956;TFCP2:0.546140979935;FOXD3:0.53127026465;HIF1A:0.526243743358;TLX1..3_NFIC{dimer}:0.506163314527;TOPORS:0.505040494444;GFI1B:0.494624603724;ZNF148:0.427574971483;IRF1,2:0.406803880569;YY1:0.367849706036;NR1H4:0.364595378655;RREB1:0.344852494767;HIC1:0.341891239634;TBX4,5:0.310425192085;LHX3,4:0.310021451935;TBP:0.278898187843;SMAD1..7,9:0.272840843793;HOX{A6,A7,B6,B7}:0.225382338667;SP1:0.221695352007;MTF1:0.19505530684;DMAP1_NCOR{1,2}_SMARC:0.184236103616;MYFfamily:0.181082092758;EGR1..3:0.16282165921;MAFB:0.159650890072;PRDM1:0.153654605731;IKZF1:0.149323152318;NFE2L2:0.135476637543;EVI1:0.130399699438;HSF1,2:0.114943160197;HNF1A:0.107686781688;HMGA1,2:0.100201271077;MTE{core}:0.0863465667495;REST:0.064644121781;TEF:0.0561083498734;ZNF384:0.0533937146941;SOX5:0.0525726823053;ESRRA:0.0252459976335;HOX{A4,D4}:0.0250253963616;IRF7:-0.0163742240701;GFI1:-0.0197753024922;AIRE:-0.0276144014747;FOXO1,3,4:-0.0692678998522;STAT2,4,6:-0.0721882730227;SOX17:-0.0835473086096;TFDP1:-0.0919530185181;BACH2:-0.10532065502;PPARG:-0.164513984802;ONECUT1,2:-0.165358424518;POU2F1..3:-0.176071603177;NHLH1,2:-0.185501274404;AR:-0.186875806143;NKX6-1,2:-0.194856855902;EP300:-0.203127459441;NFKB1_REL_RELA:-0.203441993736;FOS_FOS{B,L1}_JUN{B,D}:-0.209845776114;T:-0.213941245231;HLF:-0.218129389165;LEF1_TCF7_TCF7L1,2:-0.225123013924;POU5F1:-0.229258710705;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.234772563548;ZBTB16:-0.247907622804;POU3F1..4:-0.25592489909;MED-1{core}:-0.258722696888;ARID5B:-0.266580645184;DBP:-0.269175219934;NR5A1,2:-0.294456790038;RUNX1..3:-0.300012261978;ZFP161:-0.310109618186;MEF2{A,B,C,D}:-0.310322114196;HNF4A_NR2F1,2:-0.338606713097;NFE2:-0.361202170043;POU6F1:-0.388120382608;ZNF143:-0.405910094216;CDC5L:-0.409038556156;NKX2-3_NKX2-5:-0.418350203019;HOXA9_MEIS1:-0.472773709506;SPI1:-0.48311575474;SNAI1..3:-0.502978527556;MYB:-0.511945991122;STAT1,3:-0.517683029063;ETS1,2:-0.520580072435;SOX{8,9,10}:-0.529611317922;RFX1:-0.530948031247;FOSL2:-0.5548221209;PAX3,7:-0.571610443025;FOXM1:-0.586365255707;STAT5{A,B}:-0.590696534213;bHLH_family:-0.592999729472;PBX1:-0.610419652811;FOXA2:-0.61070526222;POU1F1:-0.61097014956;NFIL3:-0.642744574771;SPIB:-0.657367786487;CEBPA,B_DDIT3:-0.662827290449;PAX8:-0.720765829106;AHR_ARNT_ARNT2:-0.723474742078;ADNP_IRX_SIX_ZHX:-0.723796261841;IKZF2:-0.737159812371;PRRX1,2:-0.739231147496;ZEB1:-0.740515314932;CRX:-0.748830331375;ELK1,4_GABP{A,B1}:-0.762617700632;NFY{A,B,C}:-0.768607394616;ATF5_CREB3:-0.784692404684;ATF4:-0.809155625758;NRF1:-0.809888743668;FOXP1:-0.812704313801;FOXP3:-0.828182591257;PAX2:-0.841431532204;FOX{D1,D2}:-0.846845949974;PAX4:-0.850376913651;CDX1,2,4:-0.85059650413;TGIF1:-0.89826307015;RORA:-0.899433764985;MYOD1:-0.904089057702;FOXN1:-0.920724216831;PITX1..3:-0.922388531393;PAX6:-0.959691564329;OCT4_SOX2{dimer}:-0.963475471906;ELF1,2,4:-0.965086027558;CUX2:-0.970722074741;RFX2..5_RFXANK_RFXAP:-1.00329264857;E2F1..5:-1.01192429039;SREBF1,2:-1.01829892495;LMO2:-1.02036825573;CREB1:-1.08471667888;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.09206577544;ALX1:-1.1018531881;JUN:-1.10842510368;BPTF:-1.11846890031;SOX2:-1.15971872472;GATA6:-1.22584673003;RBPJ:-1.31544003733;ATF2:-1.3164320932;FOXQ1:-1.38330033517;HBP1_HMGB_SSRP1_UBTF:-1.46523556159;BREu{core}:-1.47986937215;FOX{I1,J2}:-1.58205351556;PDX1:-1.68800062497;NANOG:-1.71026713981;FOX{F1,F2,J1}:-1.98184137724;TLX2:-2.19874570822;VSX1,2:-2.28942335261 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11348-117G7;search_select_hide=table117:FF:11348-117G7 | |||
}} | }} | ||
Latest revision as of 17:54, 4 June 2020
| Name: | Hair Follicle Dermal Papilla Cells, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11979 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11979
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11979
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.894 |
| 10 | 10 | 0.784 |
| 100 | 100 | 0.909 |
| 101 | 101 | 0.34 |
| 102 | 102 | 0.496 |
| 103 | 103 | 0.397 |
| 104 | 104 | 0.665 |
| 105 | 105 | 0.535 |
| 106 | 106 | 0.0204 |
| 107 | 107 | 0.00792 |
| 108 | 108 | 0.36 |
| 109 | 109 | 0.178 |
| 11 | 11 | 0.247 |
| 110 | 110 | 0.281 |
| 111 | 111 | 0.602 |
| 112 | 112 | 0.393 |
| 113 | 113 | 0.0062 |
| 114 | 114 | 0.379 |
| 115 | 115 | 0.0182 |
| 116 | 116 | 0.0295 |
| 117 | 117 | 0.709 |
| 118 | 118 | 0.793 |
| 119 | 119 | 0.732 |
| 12 | 12 | 0.473 |
| 120 | 120 | 0.196 |
| 121 | 121 | 0.938 |
| 122 | 122 | 0.0326 |
| 123 | 123 | 0.0128 |
| 124 | 124 | 0.685 |
| 125 | 125 | 0.833 |
| 126 | 126 | 0.969 |
| 127 | 127 | 0.945 |
| 128 | 128 | 0.0195 |
| 129 | 129 | 0.63 |
| 13 | 13 | 0.875 |
| 130 | 130 | 0.332 |
| 131 | 131 | 0.592 |
| 132 | 132 | 0.146 |
| 133 | 133 | 0.45 |
| 134 | 134 | 0.795 |
| 135 | 135 | 0.897 |
| 136 | 136 | 0.565 |
| 137 | 137 | 0.221 |
| 138 | 138 | 0.609 |
| 139 | 139 | 0.984 |
| 14 | 14 | 0.349 |
| 140 | 140 | 0.447 |
| 141 | 141 | 0.322 |
| 142 | 142 | 0.286 |
| 143 | 143 | 0.65 |
| 144 | 144 | 0.505 |
| 145 | 145 | 0.278 |
| 146 | 146 | 0.975 |
| 147 | 147 | 0.0501 |
| 148 | 148 | 0.688 |
| 149 | 149 | 0.0161 |
| 15 | 15 | 0.44 |
| 150 | 150 | 0.21 |
| 151 | 151 | 0.743 |
| 152 | 152 | 0.0321 |
| 153 | 153 | 0.62 |
| 154 | 154 | 0.66 |
| 155 | 155 | 0.163 |
| 156 | 156 | 0.778 |
| 157 | 157 | 0.476 |
| 158 | 158 | 0.0153 |
| 159 | 159 | 0.657 |
| 16 | 16 | 0.0925 |
| 160 | 160 | 0.364 |
| 161 | 161 | 0.651 |
| 162 | 162 | 0.195 |
| 163 | 163 | 0.713 |
| 164 | 164 | 0.552 |
| 165 | 165 | 0.186 |
| 166 | 166 | 0.677 |
| 167 | 167 | 0.0706 |
| 168 | 168 | 0.891 |
| 169 | 169 | 0.0617 |
| 17 | 17 | 0.284 |
| 18 | 18 | 0.447 |
| 19 | 19 | 0.0053 |
| 2 | 2 | 0.134 |
| 20 | 20 | 0.713 |
| 21 | 21 | 0.219 |
| 22 | 22 | 0.183 |
| 23 | 23 | 0.19 |
| 24 | 24 | 0.83 |
| 25 | 25 | 0.418 |
| 26 | 26 | 0.0598 |
| 27 | 27 | 0.332 |
| 28 | 28 | 0.278 |
| 29 | 29 | 0.642 |
| 3 | 3 | 0.775 |
| 30 | 30 | 0.159 |
| 31 | 31 | 0.64 |
| 32 | 32 | 1.0765e-10 |
| 33 | 33 | 0.813 |
| 34 | 34 | 0.484 |
| 35 | 35 | 0.981 |
| 36 | 36 | 0.0116 |
| 37 | 37 | 0.162 |
| 38 | 38 | 0.825 |
| 39 | 39 | 0.281 |
| 4 | 4 | 0.488 |
| 40 | 40 | 0.437 |
| 41 | 41 | 0.651 |
| 42 | 42 | 0.532 |
| 43 | 43 | 0.325 |
| 44 | 44 | 0.095 |
| 45 | 45 | 0.395 |
| 46 | 46 | 0.137 |
| 47 | 47 | 0.808 |
| 48 | 48 | 0.535 |
| 49 | 49 | 0.97 |
| 5 | 5 | 0.713 |
| 50 | 50 | 0.49 |
| 51 | 51 | 0.494 |
| 52 | 52 | 0.341 |
| 53 | 53 | 0.396 |
| 54 | 54 | 0.527 |
| 55 | 55 | 0.428 |
| 56 | 56 | 0.677 |
| 57 | 57 | 0.935 |
| 58 | 58 | 0.588 |
| 59 | 59 | 0.0116 |
| 6 | 6 | 0.903 |
| 60 | 60 | 0.373 |
| 61 | 61 | 0.232 |
| 62 | 62 | 0.568 |
| 63 | 63 | 0.368 |
| 64 | 64 | 0.816 |
| 65 | 65 | 0.35 |
| 66 | 66 | 0.27 |
| 67 | 67 | 0.77 |
| 68 | 68 | 0.521 |
| 69 | 69 | 0.575 |
| 7 | 7 | 0.348 |
| 70 | 70 | 0.359 |
| 71 | 71 | 0.558 |
| 72 | 72 | 0.797 |
| 73 | 73 | 0.0262 |
| 74 | 74 | 0.856 |
| 75 | 75 | 0.93 |
| 76 | 76 | 0.735 |
| 77 | 77 | 0.00352 |
| 78 | 78 | 0.918 |
| 79 | 79 | 2.95825e-4 |
| 8 | 8 | 0.171 |
| 80 | 80 | 0.184 |
| 81 | 81 | 0.944 |
| 82 | 82 | 0.0882 |
| 83 | 83 | 0.00511 |
| 84 | 84 | 0.579 |
| 85 | 85 | 0.00802 |
| 86 | 86 | 0.567 |
| 87 | 87 | 0.0745 |
| 88 | 88 | 0.467 |
| 89 | 89 | 0.0453 |
| 9 | 9 | 0.307 |
| 90 | 90 | 0.558 |
| 91 | 91 | 0.872 |
| 92 | 92 | 0.53 |
| 93 | 93 | 0.448 |
| 94 | 94 | 0.612 |
| 95 | 95 | 0.495 |
| 96 | 96 | 0.88 |
| 97 | 97 | 0.972 |
| 98 | 98 | 0.972 |
| 99 | 99 | 0.00571 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11979
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000071 human hair follicle dermal papilla cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002559 (hair follicle cell)
0000346 (hair follicle dermal papilla cell)
1000428 (stem cell of epidermis)
UBERON: Anatomy
0000468 (multi-cellular organism)
0001003 (skin epidermis)
0002097 (skin of body)
0002199 (integument)
0002073 (hair follicle)
0000483 (epithelium)
0002384 (connective tissue)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0004923 (organ component layer)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003102 (surface structure)
0007376 (outer epithelium)
0010371 (ecto-epithelium)
0010317 (germ layer / neural crest derived structure)
0000412 (dermal papilla)
0002067 (dermis)
0001992 (papillary layer of dermis)
0002416 (integumental system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000072 (human hair follicle cell sample)
0000001 (sample)
0000071 (human hair follicle dermal papilla cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000134 (mesenchymal cell)
CL:0000221 (ectodermal cell)
